Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d037346_circ_g.13 |
ID in PlantcircBase | zma_circ_009028 |
Alias | zma_circ_0002309 |
Organism | Zea mays |
Position | chr6: 122283542-122283715 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d037346 |
Parent gene annotation |
Chromatin structure-remodeling complex protein SYD |
Parent gene strand | + |
Alternative splicing | Zm00001d037346_circ_g.12 Zm00001d037346_circ_g.14 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d037346_T031:1 Zm00001d037346_T026:1 Zm00001d037346_T035:1 Zm00001d037346_T045:1 Zm00001d037346_T014:1 Zm00001d037346_T044:1 Zm00001d037346_T042:1 Zm00001d037346_T039:1 Zm00001d037346_T023:1 Zm00001d037346_T040:1 Zm00001d037346_T038:1 Zm00001d037346_T030:1 Zm00001d037346_T013:1 Zm00001d037346_T037:1 Zm00001d037346_T029:1 Zm00001d037346_T024:1 Zm00001d037346_T006:1 Zm00001d037346_T032:1 Zm00001d037346_T043:1 Zm00001d037346_T047:1 Zm00001d037346_T025:1 Zm00001d037346_T018:1 Zm00001d037346_T034:1 Zm00001d037346_T046:1 Zm00001d037346_T017:1 Zm00001d037346_T041:1 Zm00001d037346_T019:1 Zm00001d037346_T007:1 Zm00001d037346_T033:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.651988957 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |