Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0848300_circ_g.2 |
ID in PlantcircBase | osa_circ_040702 |
Alias | NA |
Organism | Oryza sativa |
Position | chr1: 36439780-36440303 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ui-circRNA |
Identification method | CIRI-long |
Parent gene | Os01g0848200 |
Parent gene annotation |
Similar to Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [In cludes: Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (G lutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdeh yde dehydrogenase)]. (Os01t0848200-01);Similar to Delta 1-pyrrol ine-5-carboxylate synthetase (P5CS) [Includes: Glutamate 5-kinas e (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK); Gamma-glutamyl pho sphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde d ehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase)]. (Os0 1t0848200-02) |
Parent gene strand | + |
Alternative splicing | Os01g0848300_circ_g.1 |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Os01t0848300-01:2 Os01t0848200-01:1 Os01t0848200-02:1 Os01t0848300-01:2 |
Conservation Information | |
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Conserved circRNAs | osi_circ_002539* osi_circ_010926 |
PMCS | 0.216552163 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | this study |