Detail information of BGIOSGA031403_circ_g.1


General Information
CircRNA Name BGIOSGA031403_circ_g.1
ID in PlantcircBase osi_circ_008703
Alias Chr10:24015720_24015977(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr10: 21156069-21156326  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA031403
Parent gene annotation NA
Parent gene strand -
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   CT-GA
Number of exons covered BGIOSGA031403-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GCAACGGCAGAAGTATCTGACTCCATAGAATCTACCTCCTCCTCCTCCCTCGGTGGAGGTAGTG
CTGGTTGATTTAATACTTGGGTCTCTGGTTCTTGACcaatctcatgtgtttcttgcacaggacc
atcttcatctttctgattttgccagaaaggaaccgagaattgcaaaaagggcgagaaataagct
ggaacaat
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CAATCTCATGTGTTTCTTGCACAGGACCATCTTCATCTTTCTGATTTTGCCAGAAAGGAACCGA
GAATTGCAAAAAGGGCGAGAAATAAGCTGGAACAATCACTGGATAGGTCGACTGCAAATTATCT
GGCATGATAGCAGAAGCGGAAGAGCTCTCTGCAACGGCAGAAGTATCTGACTCCATAGAATCTA
CCTCCTCCTCCTCCCTCGGTGGAGGTAGTGCTGGTTGATTTAATACTTGGGTCTCTGGTTCTTG
AC
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021