Plant Circular RNA Database

Detail information of Os12g0102500_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os12g0102500_circ_g.2
					
						ID in PlantcircBase
						osa_circ_010261
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr12: 113500-117279  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os12g0102500						
					
						Parent gene annotation
						
							Serine/threonine protein kinase-related domain containing protei
n. (Os12t0102500-01);Serine/threonine protein kinase-related dom
ain containing protein. (Os12t0102500-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os12g0102500_circ_g.3 Os12g0102500_circ_g.4 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os12t0102500-02:6
Os12t0102500-01:6

General Information
CircRNA Name	Os12g0102500_circ_g.2
ID in PlantcircBase	osa_circ_010261
Alias	NA
Organism	Oryza sativa
Position	chr12: 113500-117279 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os12g0102500
Parent gene annotation	Serine/threonine protein kinase-related domain containing protei n. (Os12t0102500-01);Serine/threonine protein kinase-related dom ain containing protein. (Os12t0102500-02)
Parent gene strand	-
Alternative splicing	Os12g0102500_circ_g.3 Os12g0102500_circ_g.4
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os12t0102500-02:6 Os12t0102500-01:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AACAAGAATCAAAATGGCCCCAACCACAGCACATACAATAATTACTATAGTGCGGCCAGTGTTA
CTGTGTCCCATGCGAAGGTCACTGTTTCCTGAGAAGccattcaacaatgttacggcagtggagc
ccaaagttgtcatttgagattggttcatggcctgagattagctcaagtaaaatgacaccaaaac
tgtacata

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 913
Transcript exons: 113500-113635,113772-113955,114067-114135,114703-114829,
116810-117051,117125-117279
CCATTCAACAATGTTACGGCAGTGGAGCCCAAAGTTGTCATTTGAGATTGGTTCATGGCCTGAG
ATTAGCTCAAGTAAAATGACACCAAAACTGTACATATCACTCTTCTCTGTTAGCTGCTGCGAGA
TATAGTACTCTGGGTCCAGATATCCAACTGTTCCTCTAACTATACTTGATACATGAGACCCGTC
GACAACAGGTTTTGACAAGCCAAAGTCTGCAACTTTTGCTCTCATGTTCTTGTCAAGGAGAATG
TTACTGCTCTTGAGGTCTCTGTGGATGATAGTTGGGGAGCATCCTGTGTGGAGATACTCTATTC
CTTTTGCAGCATCTTCTGCTATCTCAAGACGCTTGACCCAGCTATTTATTTTTACATCATCAGG
GCCTCCACGGAGGTGTTCTTTTAACGTCCCGTTATGCATGAATTCATACACAAGTATATTTTTA
CCATCTTGCTGGCTGTAACCAAGGAAGCTCACCAGGTTTCTATGATGAATTCTTGAAAGCAATG
TTACCTCATTCAGGAATTCTCGGATGCCTTGATAGGAGTCATTTGTGAGAAGTTTGACTGCGAT
TTCTCTCCCATCTGTAAGCTTTCCATAGTATACTATGCCAAACCCTCCCGAACCAATTCTTCTG
TCAAATTTGTCAGTAGCATCTTCAATTTCAGACAATGCAAATCTGTGCGCCGATTCCGTGGCCA
CTTCACTGAAAAATGAGCCTAGCTTTTTTGCTGGTGCCGCAATAACAACGGTTTCGTCCGATGA
TTTCTTCTTCCTTTTGCATGTGAACAGGTAACAAACAATAGCAGCAACAAGAATCAAAATGGCC
CCAACCACAGCACATACAATAATTACTATAGTGCGGCCAGTGTTACTGTGTCCCATGCGAAGGT
CACTGTTTCCTGAGAAG
						
					

						Genomic sequence
						
							CCATTCAACAATGTTACGGCAGTGGAGCCCAAAGTTGTCATTTGAGATTGGTTCATGGCCTGAG
ATTAGCTCAAGTAAAATGACACCAAAACTGTACATATCACTCTTCTCTGTTAGCTGCTGCGAGA
TATAGTACCTACGAGCACACGCAAAAAGGGTGAGCTTGGGGAACACTTGGCATCAGATGTTACA
AAGGTATATAGCAATTCAATTTGCAAGGCCATTGATAACAAGAATAGACTTCATAAATTTCAGG
AAAGACATGGCCTTACTCTGGGTCCAGATATCCAACTGTTCCTCTAACTATACTTGATACATGA
GACCCGTCGACAACAGGTTTTGACAAGCCAAAGTCTGCAACTTTTGCTCTCATGTTCTTGTCAA
GGAGAATGTTACTGCTCTTGAGGTCTCTGTGGATGATAGTTGGGGAGCATCCTGTGTGGAGATA
CTCTATTCCTGATATTTTATTTTATTTTTCATGGAAATGAAAGACTTCAGAATCTTTGAAATGC
ATGTTGGTAGAATAATCACAGGAAAATTGTACACGAGGAAGGGAGGGAGATAAACCTTTTGCAG
CATCTTCTGCTATCTCAAGACGCTTGACCCAGCTATTTATTTTTACATCATCAGGGCCTCCTGT
CAAAGTATGATAAAGTTCATGTCAATCCTGAGCCTCAGTGTCAAAGAATCATGCACGAGCTAGA
CAAGTAGACAAAGCCGCAGCTGAGCCTTGATTTATGTGTAGTATGGAAACTTCTGAAATCTTGA
CAGTTTGTATTCAGTTCTTAGTTAAGACTGGAAAGAAGTAAACATCAGAACAGAAAAGAAAAGG
CTTATACATCAGTGAAGATCCTATAAGTTTTTCAGAACACGAATCCTTATCCAAAACTGGAAAA
AGAAAACTCAAGCATGAATTTGCTGTATTATCTAGGGAAATATCAGGTGAAAAGTACCAATCTG
ATAAAATCGTGGAAACCACTGCACAAACTATGCATATGACTCCAAAAAATTTCTCAAAATAATT
ACTGTATGAGGGGAGGAGATAATGAGATACCATACGAAATCATGGAGACCCTAATATTCTAAAA
TATAACTACGCATGGAACATTTACTTGTAGAAGAATCATTCTCTACACAACGACAATTTGGTGT
TGATTCTGCAAACTAGATTTATCATCAGATGGTAGGACCATAGGAACTTACCACGGAGGTGTTC
TTTTAACGTCCCGTTATGCATGAATTCATACACAAGTATATTTTTACCATCTTGCTGGCTGTAA
CCAAGGAAGCTCACCAGGTTTCTATGATGAATTCTTGAAAGCAATGTTACCTGAAACATAAGTC
CATCAGATACTATACTAAGCAACGGATCGCAGTAACCACCCAAAGAAAAAGTATGCGCGCTGAG
TTTTCCAGTAGACCTTGAGAAAAGGATATATGAGGGATGCCTACATAGAGGGTGAGGGTCCATA
GGATGTTCCAAATAGAAAATGTTCATATCTTATACTACTTAAAATAAATTGAGGTTATAAGTAT
ATGTAACGCAACATGGTCACATCCCATTAGTGTAGGTCTATCAATTAAGTAGGAAATGAATGTG
TCCCAGAATATACTGGGCTTCAGCTTCAGCTTCAAGGTTTCAATCTACCAAGCAGTGGTAAAAT
TAGCAATAGGTACGCAAGTTCTATTTATATCTTAAACTGTTAAACTGTGAAAAACAGCCCATTT
TGGGCCGAACGCAAAGCCTTTTTGGGCCCTGGGTCAACACTCATTAAACTGTGTGCACAAAGGT
TAAAATTCATCTGTTTTTGGCTAAAGGCTACTCATGAGTCATTGGGTCAAAGGCTAATATAGAT
GCACTTTTGGGCCCAAGGTTGACTCACGAAGTTTTGGGCTGAAGGCAAATAGTAACGTGTTTTT
CAGCTGAAGGTATTAGGGTCACGTGCTTTTGAACTGAAGACTGATACTCATGTGTAGTTGGGCC
AAAGGCTAATATTCATGTGTTTTTGGCCCCAGTGATAATACTTGTGCCCAAGACTAATACTCAT
GTGCACTTTGGCCAAAGGCTAATAATATTCATATGTTTTTGGCCCAAATTAATACTCACAATTT
TTTTTGGGTTGAAGACTATTAATCATTTGTTTTGGGGTCAAAGGTTATAATCCATACATTTTTA
GCCCCAAGGTTAATAATCATGAATTTTTTGAGCAGAAGGCTAACATTCATGTGTTTATGGGTCT
AAGGTTGAGGTTGAGTTCTTTTCAGCAACTTGAAACAACAACTTCCTCGTTTTCCGTCAACATG
CTTCCCAAACTGCTAAACGATGCGTTTTGTGAAATATATAGAAGTTCTTAAAAAAATCAAATAA
ATCCATTTATTAAATTTATAATAGTTAATACTCCGTCCATCCTCAAATGTAAGACATATTTCTT
TTGTCACCAAGACCAAGGAGAAATTACTCATCTCCCATGTAACAAAATCAAGGAACTATATGCA
TGCAACCAATGAATATTAAGATGGTTGCTTGGGTTCCTGTCAACAATTAATTTAGCACATGAAG
ACTACAAATATAATCATCTCTTTTAGAAAAACCAAAAAAAAATTGCCTAACACTTTTGGATGGA
GGGAGTACGTAACTAATTATGTGCTAATGATATGCCCCGTTTCCGAGCTGCGAACCGCTGCAGC
CAAACTGCTGGTTCGAACTAGCCCTAAGAGTAAAGAAATTATGGGGCAAAAGCTAATATTCATG
TGTTTTTTGACCAAGGTTAACACTCTTGAAATTTTTAGACGAAGCCCAAATTCATGCACTTATG
GTCCCAAGGTCAATACTAATGAAATTTTGTGCCGAAGGTTAATACTTGTATGTTTTTTTGGTGG
AAGAGTAATACACCTGTGTATTTGGAGTAAGGCAAATATTCTTGTGTTTTTTCAGCTCAAGGAT
AATATTCATGACATTTTGAGCGAAGGTAATATTTATGTGATTTGGGCTCGAAGGTAATACTCAT
GTGTTTTTGAGCTGAAGGCTAAACAATCATGCATTTTTGGCCCAAGCTAACATTCATTTGTTTT
TGGGCCCAAGGTTAATACTCATGTGTTTTTGGACCAAAGACTTAATAGTTGTGTCATTGAGGTG
AAGGCTAATAGTCAACCATTTTTGGGCCCAAGGTTAATTTTTGGCCAAACGGGAATAGTCATCC
ATTTTTAGCCTAAGTTTAATAGTCTTCATATTTTAGGCCGAACGCTAACACTTACTGTGTATGT
GATTTATATTTCAAGAAAAAACTATAAGGCAAGAAAAGAAACATACCTCATTCAGGAATTCTCG
GATGCCTTGATAGGAGTCATTTGTGAGAAGTTTGACTGCGATTTCTCTCCCATCTGTAAGCTTT
CCATAGTATACTATGCCAAACCCTCCCGAACCAATTCTTCTGTCAAATTTGTCAGTAGCATCTT
CAATTTCAGACAATGCAAATCTGTGCGCCGATTCCGTGGCCACTTCACTGAAAAATGAGCCTAG
CTTTTTTGCTGGTGCCGCAATAACAACGGTTTCTGGAGACACAAAGTAATTACTACGCGACCAT
ACACCATACCAGATATGTCCAATGAGCTAAAGAATACGCACCGTCCGATGATTTCTTCTTCCTT
TTGCATGTGAACAGGTAACAAACAATAGCAGCAACAAGAATCAAAATGGCCCCAACCACAGCAC
ATACAATAATTACTATAGTGCGGCCAGTGTTACTGTGTCCCATGCGAAGGTCACTGTTTCCTGA
GAAG
						
					

			
		

Sequences
Splice junction sequence	AACAAGAATCAAAATGGCCCCAACCACAGCACATACAATAATTACTATAGTGCGGCCAGTGTTA CTGTGTCCCATGCGAAGGTCACTGTTTCCTGAGAAGccattcaacaatgttacggcagtggagc ccaaagttgtcatttgagattggttcatggcctgagattagctcaagtaaaatgacaccaaaac tgtacata
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 913 Transcript exons: 113500-113635,113772-113955,114067-114135,114703-114829, 116810-117051,117125-117279 CCATTCAACAATGTTACGGCAGTGGAGCCCAAAGTTGTCATTTGAGATTGGTTCATGGCCTGAG ATTAGCTCAAGTAAAATGACACCAAAACTGTACATATCACTCTTCTCTGTTAGCTGCTGCGAGA TATAGTACTCTGGGTCCAGATATCCAACTGTTCCTCTAACTATACTTGATACATGAGACCCGTC GACAACAGGTTTTGACAAGCCAAAGTCTGCAACTTTTGCTCTCATGTTCTTGTCAAGGAGAATG TTACTGCTCTTGAGGTCTCTGTGGATGATAGTTGGGGAGCATCCTGTGTGGAGATACTCTATTC CTTTTGCAGCATCTTCTGCTATCTCAAGACGCTTGACCCAGCTATTTATTTTTACATCATCAGG GCCTCCACGGAGGTGTTCTTTTAACGTCCCGTTATGCATGAATTCATACACAAGTATATTTTTA CCATCTTGCTGGCTGTAACCAAGGAAGCTCACCAGGTTTCTATGATGAATTCTTGAAAGCAATG TTACCTCATTCAGGAATTCTCGGATGCCTTGATAGGAGTCATTTGTGAGAAGTTTGACTGCGAT TTCTCTCCCATCTGTAAGCTTTCCATAGTATACTATGCCAAACCCTCCCGAACCAATTCTTCTG TCAAATTTGTCAGTAGCATCTTCAATTTCAGACAATGCAAATCTGTGCGCCGATTCCGTGGCCA CTTCACTGAAAAATGAGCCTAGCTTTTTTGCTGGTGCCGCAATAACAACGGTTTCGTCCGATGA TTTCTTCTTCCTTTTGCATGTGAACAGGTAACAAACAATAGCAGCAACAAGAATCAAAATGGCC CCAACCACAGCACATACAATAATTACTATAGTGCGGCCAGTGTTACTGTGTCCCATGCGAAGGT CACTGTTTCCTGAGAAG
Genomic sequence	CCATTCAACAATGTTACGGCAGTGGAGCCCAAAGTTGTCATTTGAGATTGGTTCATGGCCTGAG ATTAGCTCAAGTAAAATGACACCAAAACTGTACATATCACTCTTCTCTGTTAGCTGCTGCGAGA TATAGTACCTACGAGCACACGCAAAAAGGGTGAGCTTGGGGAACACTTGGCATCAGATGTTACA AAGGTATATAGCAATTCAATTTGCAAGGCCATTGATAACAAGAATAGACTTCATAAATTTCAGG AAAGACATGGCCTTACTCTGGGTCCAGATATCCAACTGTTCCTCTAACTATACTTGATACATGA GACCCGTCGACAACAGGTTTTGACAAGCCAAAGTCTGCAACTTTTGCTCTCATGTTCTTGTCAA GGAGAATGTTACTGCTCTTGAGGTCTCTGTGGATGATAGTTGGGGAGCATCCTGTGTGGAGATA CTCTATTCCTGATATTTTATTTTATTTTTCATGGAAATGAAAGACTTCAGAATCTTTGAAATGC ATGTTGGTAGAATAATCACAGGAAAATTGTACACGAGGAAGGGAGGGAGATAAACCTTTTGCAG CATCTTCTGCTATCTCAAGACGCTTGACCCAGCTATTTATTTTTACATCATCAGGGCCTCCTGT CAAAGTATGATAAAGTTCATGTCAATCCTGAGCCTCAGTGTCAAAGAATCATGCACGAGCTAGA CAAGTAGACAAAGCCGCAGCTGAGCCTTGATTTATGTGTAGTATGGAAACTTCTGAAATCTTGA CAGTTTGTATTCAGTTCTTAGTTAAGACTGGAAAGAAGTAAACATCAGAACAGAAAAGAAAAGG CTTATACATCAGTGAAGATCCTATAAGTTTTTCAGAACACGAATCCTTATCCAAAACTGGAAAA AGAAAACTCAAGCATGAATTTGCTGTATTATCTAGGGAAATATCAGGTGAAAAGTACCAATCTG ATAAAATCGTGGAAACCACTGCACAAACTATGCATATGACTCCAAAAAATTTCTCAAAATAATT ACTGTATGAGGGGAGGAGATAATGAGATACCATACGAAATCATGGAGACCCTAATATTCTAAAA TATAACTACGCATGGAACATTTACTTGTAGAAGAATCATTCTCTACACAACGACAATTTGGTGT TGATTCTGCAAACTAGATTTATCATCAGATGGTAGGACCATAGGAACTTACCACGGAGGTGTTC TTTTAACGTCCCGTTATGCATGAATTCATACACAAGTATATTTTTACCATCTTGCTGGCTGTAA CCAAGGAAGCTCACCAGGTTTCTATGATGAATTCTTGAAAGCAATGTTACCTGAAACATAAGTC CATCAGATACTATACTAAGCAACGGATCGCAGTAACCACCCAAAGAAAAAGTATGCGCGCTGAG TTTTCCAGTAGACCTTGAGAAAAGGATATATGAGGGATGCCTACATAGAGGGTGAGGGTCCATA GGATGTTCCAAATAGAAAATGTTCATATCTTATACTACTTAAAATAAATTGAGGTTATAAGTAT ATGTAACGCAACATGGTCACATCCCATTAGTGTAGGTCTATCAATTAAGTAGGAAATGAATGTG TCCCAGAATATACTGGGCTTCAGCTTCAGCTTCAAGGTTTCAATCTACCAAGCAGTGGTAAAAT TAGCAATAGGTACGCAAGTTCTATTTATATCTTAAACTGTTAAACTGTGAAAAACAGCCCATTT TGGGCCGAACGCAAAGCCTTTTTGGGCCCTGGGTCAACACTCATTAAACTGTGTGCACAAAGGT TAAAATTCATCTGTTTTTGGCTAAAGGCTACTCATGAGTCATTGGGTCAAAGGCTAATATAGAT GCACTTTTGGGCCCAAGGTTGACTCACGAAGTTTTGGGCTGAAGGCAAATAGTAACGTGTTTTT CAGCTGAAGGTATTAGGGTCACGTGCTTTTGAACTGAAGACTGATACTCATGTGTAGTTGGGCC AAAGGCTAATATTCATGTGTTTTTGGCCCCAGTGATAATACTTGTGCCCAAGACTAATACTCAT GTGCACTTTGGCCAAAGGCTAATAATATTCATATGTTTTTGGCCCAAATTAATACTCACAATTT TTTTTGGGTTGAAGACTATTAATCATTTGTTTTGGGGTCAAAGGTTATAATCCATACATTTTTA GCCCCAAGGTTAATAATCATGAATTTTTTGAGCAGAAGGCTAACATTCATGTGTTTATGGGTCT AAGGTTGAGGTTGAGTTCTTTTCAGCAACTTGAAACAACAACTTCCTCGTTTTCCGTCAACATG CTTCCCAAACTGCTAAACGATGCGTTTTGTGAAATATATAGAAGTTCTTAAAAAAATCAAATAA ATCCATTTATTAAATTTATAATAGTTAATACTCCGTCCATCCTCAAATGTAAGACATATTTCTT TTGTCACCAAGACCAAGGAGAAATTACTCATCTCCCATGTAACAAAATCAAGGAACTATATGCA TGCAACCAATGAATATTAAGATGGTTGCTTGGGTTCCTGTCAACAATTAATTTAGCACATGAAG ACTACAAATATAATCATCTCTTTTAGAAAAACCAAAAAAAAATTGCCTAACACTTTTGGATGGA GGGAGTACGTAACTAATTATGTGCTAATGATATGCCCCGTTTCCGAGCTGCGAACCGCTGCAGC CAAACTGCTGGTTCGAACTAGCCCTAAGAGTAAAGAAATTATGGGGCAAAAGCTAATATTCATG TGTTTTTTGACCAAGGTTAACACTCTTGAAATTTTTAGACGAAGCCCAAATTCATGCACTTATG GTCCCAAGGTCAATACTAATGAAATTTTGTGCCGAAGGTTAATACTTGTATGTTTTTTTGGTGG AAGAGTAATACACCTGTGTATTTGGAGTAAGGCAAATATTCTTGTGTTTTTTCAGCTCAAGGAT AATATTCATGACATTTTGAGCGAAGGTAATATTTATGTGATTTGGGCTCGAAGGTAATACTCAT GTGTTTTTGAGCTGAAGGCTAAACAATCATGCATTTTTGGCCCAAGCTAACATTCATTTGTTTT TGGGCCCAAGGTTAATACTCATGTGTTTTTGGACCAAAGACTTAATAGTTGTGTCATTGAGGTG AAGGCTAATAGTCAACCATTTTTGGGCCCAAGGTTAATTTTTGGCCAAACGGGAATAGTCATCC ATTTTTAGCCTAAGTTTAATAGTCTTCATATTTTAGGCCGAACGCTAACACTTACTGTGTATGT GATTTATATTTCAAGAAAAAACTATAAGGCAAGAAAAGAAACATACCTCATTCAGGAATTCTCG GATGCCTTGATAGGAGTCATTTGTGAGAAGTTTGACTGCGATTTCTCTCCCATCTGTAAGCTTT CCATAGTATACTATGCCAAACCCTCCCGAACCAATTCTTCTGTCAAATTTGTCAGTAGCATCTT CAATTTCAGACAATGCAAATCTGTGCGCCGATTCCGTGGCCACTTCACTGAAAAATGAGCCTAG CTTTTTTGCTGGTGCCGCAATAACAACGGTTTCTGGAGACACAAAGTAATTACTACGCGACCAT ACACCATACCAGATATGTCCAATGAGCTAAAGAATACGCACCGTCCGATGATTTCTTCTTCCTT TTGCATGTGAACAGGTAACAAACAATAGCAGCAACAAGAATCAAAATGGCCCCAACCACAGCAC ATACAATAATTACTATAGTGCGGCCAGTGTTACTGTGTCCCATGCGAAGGTCACTGTTTCCTGA GAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.313686761

Conservation Information
Conserved circRNAs	NA
PMCS	0.313686761

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							117194-113541(+)
117256-117264(-)
113557-117264(-)
						
						Potential amino acid sequence
						
							MAPTTAHTIITIVRPVLLCPMRRSLFPEKPFNNVTAVEPKVVI*(+)
MGHSNTGRTIVIIVCAVVGAILILVAAIVCYLFTCKRKKKSSDETVVIAAPAKKLGSFFSEVAT
ESAHRFALSEIEDATDKFDRRIGSGGFGIVYYGKLTDGREIAVKLLTNDSYQGIREFLNEVTLL
SRIHHRNLVSFLGYSQQDGKNILVYEFMHNGTLKEHLRGGPDDVKINSWVKRLEIAEDAAKGIE
YLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPVVDGSHVSSIVRGTVGYLDPEYYISQ
QLTEKSDMYSFGVILLELISGHEPISNDNFGLHCRNIVEWLLRKQ*(-)
MNQSQMTTLGSTAVTLLNGFSGNSDLRMGHSNTGRTIVIIVCAVVGAILILVAAIVCYLFTCKR
KKKSSDETVVIAAPAKKLGSFFSEVATESAHRFALSEIEDATDKFDRRIGSGGFGIVYYGKLTD
GREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRNLVSFLGYSQQDGKNILVYEFMHNGTLKEHL
RGGPDDVKINSWVKRLEIAEDAAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK
PVVDGSHVSSIVRGTVGYLDPEYYISQQLTEKSDMYSFGVILLELISGHEPISNDNFGLHCRNI
VEWLLRKQ*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	117194-113541(+) 117256-117264(-) 113557-117264(-)
Potential amino acid sequence	MAPTTAHTIITIVRPVLLCPMRRSLFPEKPFNNVTAVEPKVVI(+) MGHSNTGRTIVIIVCAVVGAILILVAAIVCYLFTCKRKKKSSDETVVIAAPAKKLGSFFSEVAT ESAHRFALSEIEDATDKFDRRIGSGGFGIVYYGKLTDGREIAVKLLTNDSYQGIREFLNEVTLL SRIHHRNLVSFLGYSQQDGKNILVYEFMHNGTLKEHLRGGPDDVKINSWVKRLEIAEDAAKGIE YLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSKPVVDGSHVSSIVRGTVGYLDPEYYISQ QLTEKSDMYSFGVILLELISGHEPISNDNFGLHCRNIVEWLLRKQ(-) MNQSQMTTLGSTAVTLLNGFSGNSDLRMGHSNTGRTIVIIVCAVVGAILILVAAIVCYLFTCKR KKKSSDETVVIAAPAKKLGSFFSEVATESAHRFALSEIEDATDKFDRRIGSGGFGIVYYGKLTD GREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRNLVSFLGYSQQDGKNILVYEFMHNGTLKEHL RGGPDDVKINSWVKRLEIAEDAAKGIEYLHTGCSPTIIHRDLKSSNILLDKNMRAKVADFGLSK PVVDGSHVSSIVRGTVGYLDPEYYISQQLTEKSDMYSFGVILLELISGHEPISNDNFGLHCRNI VEWLLRKQ*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os12g0102500_circ_g.2

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