Plant Circular RNA Database

Detail information of Os08g0307400_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os08g0307400_circ_g.3
					
						ID in PlantcircBase
						osa_circ_036651
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 12856350-12864756  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os08g0307400						
					
						Parent gene annotation
						
							Similar to Phosphatidylinositol 3-kinase 1. (Os08t0307400-01);Si
milar to Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.1
37) (PI3- kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5). (Os08t0307
400-02);Similar to Phosphatidylinositol 3-kinase 1. (Os08t030740
0-03)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os08g0307400_circ_g.1 Os08g0307400_circ_g.2 Os08g0307400_circ_g.4 Os08g0307400_circ_g.5 Os08g0307400_circ_g.6 Os08g0307400_circ_g.7 Os08g0307400_circ_g.8 Os08g0307400_circ_g.9 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0307400-02:11
Os08t0307400-01:11
Os08t0307400-03:10

General Information
CircRNA Name	Os08g0307400_circ_g.3
ID in PlantcircBase	osa_circ_036651
Alias	NA
Organism	Oryza sativa
Position	chr8: 12856350-12864756 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer
Parent gene	Os08g0307400
Parent gene annotation	Similar to Phosphatidylinositol 3-kinase 1. (Os08t0307400-01);Si milar to Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.1 37) (PI3- kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5). (Os08t0307 400-02);Similar to Phosphatidylinositol 3-kinase 1. (Os08t030740 0-03)
Parent gene strand	-
Alternative splicing	Os08g0307400_circ_g.1 Os08g0307400_circ_g.2 Os08g0307400_circ_g.4 Os08g0307400_circ_g.5 Os08g0307400_circ_g.6 Os08g0307400_circ_g.7 Os08g0307400_circ_g.8 Os08g0307400_circ_g.9
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0307400-02:11 Os08t0307400-01:11 Os08t0307400-03:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGATTCGCCCAATCTCAGGATCACATGCAATAACAAGTTTATTCTTAGATATATCCACTAAGGA
TGAAGGGACTGATGTATGCAACTTTGCTCCATATTCcttagaagtccctttgtctgtgatactc
tcaatatttgatccagtcatcagataaaaaagattcagtatgaggttgctggactttcgtaata
tgttgtat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1631
Transcript exons: 12856350-12856488,12856578-12856730,12858088-12858242,12
860561-12860698,12860787-12860957,12861120-12861301,1286
1411-12861532,12862859-12862994,12863350-12863445,128640
88-12864235,12864566-12864756
CTTAGAAGTCCCTTTGTCTGTGATACTCTCAATATTTGATCCAGTCATCAGATAAAAAAGATTC
AGTATGAGGTTGCTGGACTTTCGTAATATGTTGTATGCCTCGCAACAGTAGGACTTGAATCTTG
CATAGTATTCACTTTCAGTACCACCCATGGCCTCAACCATTTCTTTGCATAATTTCATCGGTGG
TGATGGTGGTGCAAATCGATGTGGTTGTTCCCCAAGCATATACGAGAAGTCAACATGGAAAAGT
CTTCCATCGTCTTGTAGGAGAAGGTTGTCAAGATGCCTGTCTCCAATCCCCAGTATGTATGTAA
TGACACTGTAGCCAGCACAACTTTTTATAAAAGTTTCCAAACATTGGGCAGTTATACCAAAAGG
GCCATCTTCATCCGGATTACACTTTTGTAGGTAACTTTCTATACTGCCCGTTTTTTGTATAATC
TTTGCAACAGAAATTGAAGGAATAAACTCAACCAACCCTTCTTCTAGACCAGTCGCAAGAACTT
GATAAGGAGTAAGGTGTAAGTCTAGATTATCTGACTTGAGCAACCGATCCATCAAAGAGATTAT
TTGAATAACCAACTGATCCTTGCGGAGATTATCTCCCTTCTTGAAAATCATTTTCGATGTACCC
CCATTCACAGTACTAAATGCTATACACAATGGATAATTAGCACTTTTGAATACCAATGACTCTT
CAGGCACAATTCCGTCAAGGAGGACAGTCGGTGTTAATGGAGATGGAATTGGCTCACTGAAGTT
TTTAAGCTCACTGAAAATTCCGGAGAATAACTGTTCTAATATCCTGCCTTTAGTTTGTGCGTCA
TGTTTGACATTTGATAGTTCCTTCATTATAGAACGTAACTGAGCAGTGAGTTCTGCCTGCTCTA
TCAAACTCTGCCACACTTGAAATCCATTTTCCTCCTTATGTATCTCATTATAGCATCTTCAAGC
ATCTCATATGTACATAGATACCTTCTTGCATGAGAAGGATCATGAAGCTCAACAACTAAATACC
AGCGAAGAAAGCTAGCAAGTTCGTAATTTGACAAAGCCCGATTCACAAGGAAGTGTGCTAGACG
AGATCTGTCAGATCTTTCAAACCGCAGGCCTTGTACAAGTTGCAGCAAATAGCATTGCAGTTCT
TCGTCGCTGGCCCTTTCAAACACGCCGACAGCATAAGCACGAACTTCCTCATTTTGAAAAACTG
GTGAAAGAAGCCCCAATGCATCAGCCACATCAATAGATTCCCACCTTGGAATCAACGCAACAGC
TTGTTTGGCTTCCTGGATGTCACTCCATTCCACAGAGAGGAGGAACTTTACAAGAGCTTTCTTC
TCAGATGTCAAATAGAAACGAAATTTCCACAACAATTGCTTTTCATCCACATTTAAAGTGCGTG
TGGGTGGATACTTGAGGATGTTTTGTATTAACTTTTGGTCAACTGAGCTTGGCTTCATCTCTCT
ATCATTTACTCCACGAGCCAAGCTCCAAGCAAGCACAGAGTGTTTATGCTCAGATGGATTGATT
CGCCCAATCTCAGGATCACATGCAATAACAAGTTTATTCTTAGATATATCCACTAAGGATGAAG
GGACTGATGTATGCAACTTTGCTCCATATTC
Transcript length: 1635
Transcript exons: 12856350-12856488,12856578-12856730,12858088-12858242,12
860561-12860698,12860787-12860957,12861120-12861305,1286
1411-12861532,12862859-12862994,12863350-12863445,128640
88-12864235,12864566-12864756
CTTAGAAGTCCCTTTGTCTGTGATACTCTCAATATTTGATCCAGTCATCAGATAAAAAAGATTC
AGTATGAGGTTGCTGGACTTTCGTAATATGTTGTATGCCTCGCAACAGTAGGACTTGAATCTTG
CATAGTATTCACTTTCAGTACCACCCATGGCCTCAACCATTTCTTTGCATAATTTCATCGGTGG
TGATGGTGGTGCAAATCGATGTGGTTGTTCCCCAAGCATATACGAGAAGTCAACATGGAAAAGT
CTTCCATCGTCTTGTAGGAGAAGGTTGTCAAGATGCCTGTCTCCAATCCCCAGTATGTATGTAA
TGACACTGTAGCCAGCACAACTTTTTATAAAAGTTTCCAAACATTGGGCAGTTATACCAAAAGG
GCCATCTTCATCCGGATTACACTTTTGTAGGTAACTTTCTATACTGCCCGTTTTTTGTATAATC
TTTGCAACAGAAATTGAAGGAATAAACTCAACCAACCCTTCTTCTAGACCAGTCGCAAGAACTT
GATAAGGAGTAAGGTGTAAGTCTAGATTATCTGACTTGAGCAACCGATCCATCAAAGAGATTAT
TTGAATAACCAACTGATCCTTGCGGAGATTATCTCCCTTCTTGAAAATCATTTTCGATGTACCC
CCATTCACAGTACTAAATGCTATACACAATGGATAATTAGCACTTTTGAATACCAATGACTCTT
CAGGCACAATTCCGTCAAGGAGGACAGTCGGTGTTAATGGAGATGGAATTGGCTCACTGAAGTT
TTTAAGCTCACTGAAAATTCCGGAGAATAACTGTTCTAATATCCTGCCTTTAGTTTGTGCGTCA
TGTTTGACATTTGATAGTTCCTTCATTATAGAACGTAACTGAGCAGTGAGTTCTGCCTGCTCTA
TCAAACTCTGCCACACTTGAAATCCATTTTCCTCCTTATGTACTGATCTCATTATAGCATCTTC
AAGCATCTCATATGTACATAGATACCTTCTTGCATGAGAAGGATCATGAAGCTCAACAACTAAA
TACCAGCGAAGAAAGCTAGCAAGTTCGTAATTTGACAAAGCCCGATTCACAAGGAAGTGTGCTA
GACGAGATCTGTCAGATCTTTCAAACCGCAGGCCTTGTACAAGTTGCAGCAAATAGCATTGCAG
TTCTTCGTCGCTGGCCCTTTCAAACACGCCGACAGCATAAGCACGAACTTCCTCATTTTGAAAA
ACTGGTGAAAGAAGCCCCAATGCATCAGCCACATCAATAGATTCCCACCTTGGAATCAACGCAA
CAGCTTGTTTGGCTTCCTGGATGTCACTCCATTCCACAGAGAGGAGGAACTTTACAAGAGCTTT
CTTCTCAGATGTCAAATAGAAACGAAATTTCCACAACAATTGCTTTTCATCCACATTTAAAGTG
CGTGTGGGTGGATACTTGAGGATGTTTTGTATTAACTTTTGGTCAACTGAGCTTGGCTTCATCT
CTCTATCATTTACTCCACGAGCCAAGCTCCAAGCAAGCACAGAGTGTTTATGCTCAGATGGATT
GATTCGCCCAATCTCAGGATCACATGCAATAACAAGTTTATTCTTAGATATATCCACTAAGGAT
GAAGGGACTGATGTATGCAACTTTGCTCCATATTC
						
					

						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.						
					

			
		

Sequences
Splice junction sequence	TGATTCGCCCAATCTCAGGATCACATGCAATAACAAGTTTATTCTTAGATATATCCACTAAGGA TGAAGGGACTGATGTATGCAACTTTGCTCCATATTCcttagaagtccctttgtctgtgatactc tcaatatttgatccagtcatcagataaaaaagattcagtatgaggttgctggactttcgtaata tgttgtat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1631 Transcript exons: 12856350-12856488,12856578-12856730,12858088-12858242,12 860561-12860698,12860787-12860957,12861120-12861301,1286 1411-12861532,12862859-12862994,12863350-12863445,128640 88-12864235,12864566-12864756 CTTAGAAGTCCCTTTGTCTGTGATACTCTCAATATTTGATCCAGTCATCAGATAAAAAAGATTC AGTATGAGGTTGCTGGACTTTCGTAATATGTTGTATGCCTCGCAACAGTAGGACTTGAATCTTG CATAGTATTCACTTTCAGTACCACCCATGGCCTCAACCATTTCTTTGCATAATTTCATCGGTGG TGATGGTGGTGCAAATCGATGTGGTTGTTCCCCAAGCATATACGAGAAGTCAACATGGAAAAGT CTTCCATCGTCTTGTAGGAGAAGGTTGTCAAGATGCCTGTCTCCAATCCCCAGTATGTATGTAA TGACACTGTAGCCAGCACAACTTTTTATAAAAGTTTCCAAACATTGGGCAGTTATACCAAAAGG GCCATCTTCATCCGGATTACACTTTTGTAGGTAACTTTCTATACTGCCCGTTTTTTGTATAATC TTTGCAACAGAAATTGAAGGAATAAACTCAACCAACCCTTCTTCTAGACCAGTCGCAAGAACTT GATAAGGAGTAAGGTGTAAGTCTAGATTATCTGACTTGAGCAACCGATCCATCAAAGAGATTAT TTGAATAACCAACTGATCCTTGCGGAGATTATCTCCCTTCTTGAAAATCATTTTCGATGTACCC CCATTCACAGTACTAAATGCTATACACAATGGATAATTAGCACTTTTGAATACCAATGACTCTT CAGGCACAATTCCGTCAAGGAGGACAGTCGGTGTTAATGGAGATGGAATTGGCTCACTGAAGTT TTTAAGCTCACTGAAAATTCCGGAGAATAACTGTTCTAATATCCTGCCTTTAGTTTGTGCGTCA TGTTTGACATTTGATAGTTCCTTCATTATAGAACGTAACTGAGCAGTGAGTTCTGCCTGCTCTA TCAAACTCTGCCACACTTGAAATCCATTTTCCTCCTTATGTATCTCATTATAGCATCTTCAAGC ATCTCATATGTACATAGATACCTTCTTGCATGAGAAGGATCATGAAGCTCAACAACTAAATACC AGCGAAGAAAGCTAGCAAGTTCGTAATTTGACAAAGCCCGATTCACAAGGAAGTGTGCTAGACG AGATCTGTCAGATCTTTCAAACCGCAGGCCTTGTACAAGTTGCAGCAAATAGCATTGCAGTTCT TCGTCGCTGGCCCTTTCAAACACGCCGACAGCATAAGCACGAACTTCCTCATTTTGAAAAACTG GTGAAAGAAGCCCCAATGCATCAGCCACATCAATAGATTCCCACCTTGGAATCAACGCAACAGC TTGTTTGGCTTCCTGGATGTCACTCCATTCCACAGAGAGGAGGAACTTTACAAGAGCTTTCTTC TCAGATGTCAAATAGAAACGAAATTTCCACAACAATTGCTTTTCATCCACATTTAAAGTGCGTG TGGGTGGATACTTGAGGATGTTTTGTATTAACTTTTGGTCAACTGAGCTTGGCTTCATCTCTCT ATCATTTACTCCACGAGCCAAGCTCCAAGCAAGCACAGAGTGTTTATGCTCAGATGGATTGATT CGCCCAATCTCAGGATCACATGCAATAACAAGTTTATTCTTAGATATATCCACTAAGGATGAAG GGACTGATGTATGCAACTTTGCTCCATATTC Transcript length: 1635 Transcript exons: 12856350-12856488,12856578-12856730,12858088-12858242,12 860561-12860698,12860787-12860957,12861120-12861305,1286 1411-12861532,12862859-12862994,12863350-12863445,128640 88-12864235,12864566-12864756 CTTAGAAGTCCCTTTGTCTGTGATACTCTCAATATTTGATCCAGTCATCAGATAAAAAAGATTC AGTATGAGGTTGCTGGACTTTCGTAATATGTTGTATGCCTCGCAACAGTAGGACTTGAATCTTG CATAGTATTCACTTTCAGTACCACCCATGGCCTCAACCATTTCTTTGCATAATTTCATCGGTGG TGATGGTGGTGCAAATCGATGTGGTTGTTCCCCAAGCATATACGAGAAGTCAACATGGAAAAGT CTTCCATCGTCTTGTAGGAGAAGGTTGTCAAGATGCCTGTCTCCAATCCCCAGTATGTATGTAA TGACACTGTAGCCAGCACAACTTTTTATAAAAGTTTCCAAACATTGGGCAGTTATACCAAAAGG GCCATCTTCATCCGGATTACACTTTTGTAGGTAACTTTCTATACTGCCCGTTTTTTGTATAATC TTTGCAACAGAAATTGAAGGAATAAACTCAACCAACCCTTCTTCTAGACCAGTCGCAAGAACTT GATAAGGAGTAAGGTGTAAGTCTAGATTATCTGACTTGAGCAACCGATCCATCAAAGAGATTAT TTGAATAACCAACTGATCCTTGCGGAGATTATCTCCCTTCTTGAAAATCATTTTCGATGTACCC CCATTCACAGTACTAAATGCTATACACAATGGATAATTAGCACTTTTGAATACCAATGACTCTT CAGGCACAATTCCGTCAAGGAGGACAGTCGGTGTTAATGGAGATGGAATTGGCTCACTGAAGTT TTTAAGCTCACTGAAAATTCCGGAGAATAACTGTTCTAATATCCTGCCTTTAGTTTGTGCGTCA TGTTTGACATTTGATAGTTCCTTCATTATAGAACGTAACTGAGCAGTGAGTTCTGCCTGCTCTA TCAAACTCTGCCACACTTGAAATCCATTTTCCTCCTTATGTACTGATCTCATTATAGCATCTTC AAGCATCTCATATGTACATAGATACCTTCTTGCATGAGAAGGATCATGAAGCTCAACAACTAAA TACCAGCGAAGAAAGCTAGCAAGTTCGTAATTTGACAAAGCCCGATTCACAAGGAAGTGTGCTA GACGAGATCTGTCAGATCTTTCAAACCGCAGGCCTTGTACAAGTTGCAGCAAATAGCATTGCAG TTCTTCGTCGCTGGCCCTTTCAAACACGCCGACAGCATAAGCACGAACTTCCTCATTTTGAAAA ACTGGTGAAAGAAGCCCCAATGCATCAGCCACATCAATAGATTCCCACCTTGGAATCAACGCAA CAGCTTGTTTGGCTTCCTGGATGTCACTCCATTCCACAGAGAGGAGGAACTTTACAAGAGCTTT CTTCTCAGATGTCAAATAGAAACGAAATTTCCACAACAATTGCTTTTCATCCACATTTAAAGTG CGTGTGGGTGGATACTTGAGGATGTTTTGTATTAACTTTTGGTCAACTGAGCTTGGCTTCATCT CTCTATCATTTACTCCACGAGCCAAGCTCCAAGCAAGCACAGAGTGTTTATGCTCAGATGGATT GATTCGCCCAATCTCAGGATCACATGCAATAACAAGTTTATTCTTAGATATATCCACTAAGGAT GAAGGGACTGATGTATGCAACTTTGCTCCATATTC
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.301530182

Conservation Information
Conserved circRNAs	NA
PMCS	0.301530182

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							12864222-12856401(+)
12864593-12856352(-)
						
					

						Potential amino acid sequence
						
							MFCINFWSTELGFISLSFTPRAKLQASTECLCSDGLIRPISGSHAITSLFLDISTKDEGTDVCN
FAPYSLEVPLSVILSIFDPVIR*(+)
MKPSSVDQKLIQNILKYPPTRTLNVDEKQLLWKFRFYLTSEKKALVKFLLSVEWSDIQEAKQAV
ALIPRWESIDVADALGLLSPVFQNEEVRAYAVGVFERASDEELQCYLLQLVQGLRFERSDRSRL
AHFLVNRALSNYELASFLRWYLVVELHDPSHARRYLCTYEMLEDAIMRSVHKEENGFQVWQSLI
EQAELTAQLRSIMKELSNVKHDAQTKGRILEQLFSGIFSELKNFSEPIPSPLTPTVLLDGIVPE
ESLVFKSANYPLCIAFSTVNGGTSKMIFKKGDNLRKDQLVIQIISLMDRLLKSDNLDLHLTPYQ
VLATGLEEGLVEFIPSISVAKIIQKTGSIESYLQKCNPDEDGPFGITAQCLETFIKSCAGYSVI
TYILGIGDRHLDNLLLQDDGRLFHVDFSYMLGEQPHRFAPPSPPMKLCKEMVEAMGGTESEYYA
RFKSYCCEAYNILRKSSNLILNLFYLMTGSNIESITDKGTSKEYGAKLHTSVPSSLVDISKNKL
VIACDPEIGRINPSEHKHSVLAWSLARGVNDREMKPSSVDQKLIQNILKYPPTRTLNVDEKQLL
WKFRFYLTSEKKALVKFLLSVEWSDIQEAKQAVALIPRWESIDVADALGLLSPVFQNEEVRAYA
VGVFERASDEELQCYLLQLVQGLRFERSDRSRLAHFLVNRALSNYELASFLRWYLVVELHDPSH
ARRYLCTYEMLEDAIMRSVHKEENGFQVWQSLIEQAELTAQLRSIMKELSNVKHDAQTKGRILE
QLFSGIFSELKNFSEPIPSPLTPTVLLDGIVPEESLVFKSANYPLCIAFSTVNGGTSKMIFKKG
DNLRKDQLVIQIISLMDRLLKSDNLDLHLTPYQVLATGLEEGLVEFIPSISVAKIIQKTGSIES
YLQKCNPDEDGPFGITAQCLETFIKSCAGYSVITYILGIGDRHLDNLLLQDDGRLFHVDFSYML
GEQPHRFAPPSPPMKLCKEMVEAMGGTESEYYARFKSYCCEAYNILRKSSNLILNLFYLMTGSN
IESITDKGTSKEYGAKLHTSVPSSLVDISKNKLVIACDPEIGRINPSEHKHSVLAWSLARGVND
REMKPSSVDQKLIQNILKYPPTRTLNVDEKQLLWKFRFYLTSEKKALVKFLLSVEWSDIQEAKQ
AVALIPRWESIDVADALGLLSPVFQNEEVRAYAVGVFERASDEELQCYLLQLVQGLRFERSDRS
RLAHFLVNRALSNYELASFLRWYLVVELHDPSHARRYLCTYEMLEDAIMRSVHKEENGFQVWQS
LIEQAELTAQLRSIMKELSNVKHDAQTKGRILEQLFSGIFSELKNFSEPIPSPLTPTVLLDGIV
PEESLVFKSANYPLCIAFSTVNGGTSKMIFKKGDNLRKDQLVIQIISLMDRLLKSDNLDLHLTP
YQVLATGLEEGLVEFIPSISVAKIIQKTGSIESYLQKCNPDEDGPFGITAQCLETFIKSCAGYS
VITYILGIGDRHLDNLLLQDDGRLFHVDFSYMLGEQPHRFAPPSPPMKLCKEMVEAMGGTESEY
YARFKSYCCEAYNILRKSSNLILNLFYLMTGSNIESITDKGTSKEYGAKLHTSVPSSLVDISKN
KLVIACDPEIGRINPSEHKHSVLAWSLARGVNDREMKPSSVDQKLIQNILKYPPTRTLNVDEKQ
LLWKFRFYLTSEKKALVKFLLSVEWSDIQEAKQAVALIPRWESIDVADALGLLSPVFQNEEVRA
YAVGVFERASDEELQCYLLQLVQGLRFERSDRSRLAHFLVNRALSNYELASFLRWYLVVELHDP
SHARRYLCTYEMLEDAIMRSVHKEENGFQVWQSLIEQAELTAQLRSIMKELSNVKHDAQTKGRI
LEQLFSGIFSELKNFSEPIPSPLTPTVLLDGIVPEESLVFKSANYPLCIAFSTVNGGTSKMIFK
KGDNLRKDQLVIQIISLMDRLLKSDNLDLHLTPYQVLATGLEEGLVEFIPSISVAKIIQKTGSI
ESYLQKCNPDEDGPFGITAQCLETFIKSCAGYSVITYILGIGDRHLDNLLLQDDGRLFHVDFSY
MLGEQPHRFAPPSPPMKLCKEMVEAMGGTESEYYARFKSYCCEAYNILRKSSNLILNLFYLMTG
SNIESITDKGTSK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	12864222-12856401(+) 12864593-12856352(-)
Potential amino acid sequence	MFCINFWSTELGFISLSFTPRAKLQASTECLCSDGLIRPISGSHAITSLFLDISTKDEGTDVCN FAPYSLEVPLSVILSIFDPVIR*(+) MKPSSVDQKLIQNILKYPPTRTLNVDEKQLLWKFRFYLTSEKKALVKFLLSVEWSDIQEAKQAV ALIPRWESIDVADALGLLSPVFQNEEVRAYAVGVFERASDEELQCYLLQLVQGLRFERSDRSRL AHFLVNRALSNYELASFLRWYLVVELHDPSHARRYLCTYEMLEDAIMRSVHKEENGFQVWQSLI EQAELTAQLRSIMKELSNVKHDAQTKGRILEQLFSGIFSELKNFSEPIPSPLTPTVLLDGIVPE ESLVFKSANYPLCIAFSTVNGGTSKMIFKKGDNLRKDQLVIQIISLMDRLLKSDNLDLHLTPYQ VLATGLEEGLVEFIPSISVAKIIQKTGSIESYLQKCNPDEDGPFGITAQCLETFIKSCAGYSVI TYILGIGDRHLDNLLLQDDGRLFHVDFSYMLGEQPHRFAPPSPPMKLCKEMVEAMGGTESEYYA RFKSYCCEAYNILRKSSNLILNLFYLMTGSNIESITDKGTSKEYGAKLHTSVPSSLVDISKNKL VIACDPEIGRINPSEHKHSVLAWSLARGVNDREMKPSSVDQKLIQNILKYPPTRTLNVDEKQLL WKFRFYLTSEKKALVKFLLSVEWSDIQEAKQAVALIPRWESIDVADALGLLSPVFQNEEVRAYA VGVFERASDEELQCYLLQLVQGLRFERSDRSRLAHFLVNRALSNYELASFLRWYLVVELHDPSH ARRYLCTYEMLEDAIMRSVHKEENGFQVWQSLIEQAELTAQLRSIMKELSNVKHDAQTKGRILE QLFSGIFSELKNFSEPIPSPLTPTVLLDGIVPEESLVFKSANYPLCIAFSTVNGGTSKMIFKKG DNLRKDQLVIQIISLMDRLLKSDNLDLHLTPYQVLATGLEEGLVEFIPSISVAKIIQKTGSIES YLQKCNPDEDGPFGITAQCLETFIKSCAGYSVITYILGIGDRHLDNLLLQDDGRLFHVDFSYML GEQPHRFAPPSPPMKLCKEMVEAMGGTESEYYARFKSYCCEAYNILRKSSNLILNLFYLMTGSN IESITDKGTSKEYGAKLHTSVPSSLVDISKNKLVIACDPEIGRINPSEHKHSVLAWSLARGVND REMKPSSVDQKLIQNILKYPPTRTLNVDEKQLLWKFRFYLTSEKKALVKFLLSVEWSDIQEAKQ AVALIPRWESIDVADALGLLSPVFQNEEVRAYAVGVFERASDEELQCYLLQLVQGLRFERSDRS RLAHFLVNRALSNYELASFLRWYLVVELHDPSHARRYLCTYEMLEDAIMRSVHKEENGFQVWQS LIEQAELTAQLRSIMKELSNVKHDAQTKGRILEQLFSGIFSELKNFSEPIPSPLTPTVLLDGIV PEESLVFKSANYPLCIAFSTVNGGTSKMIFKKGDNLRKDQLVIQIISLMDRLLKSDNLDLHLTP YQVLATGLEEGLVEFIPSISVAKIIQKTGSIESYLQKCNPDEDGPFGITAQCLETFIKSCAGYS VITYILGIGDRHLDNLLLQDDGRLFHVDFSYMLGEQPHRFAPPSPPMKLCKEMVEAMGGTESEY YARFKSYCCEAYNILRKSSNLILNLFYLMTGSNIESITDKGTSKEYGAKLHTSVPSSLVDISKN KLVIACDPEIGRINPSEHKHSVLAWSLARGVNDREMKPSSVDQKLIQNILKYPPTRTLNVDEKQ LLWKFRFYLTSEKKALVKFLLSVEWSDIQEAKQAVALIPRWESIDVADALGLLSPVFQNEEVRA YAVGVFERASDEELQCYLLQLVQGLRFERSDRSRLAHFLVNRALSNYELASFLRWYLVVELHDP SHARRYLCTYEMLEDAIMRSVHKEENGFQVWQSLIEQAELTAQLRSIMKELSNVKHDAQTKGRI LEQLFSGIFSELKNFSEPIPSPLTPTVLLDGIVPEESLVFKSANYPLCIAFSTVNGGTSKMIFK KGDNLRKDQLVIQIISLMDRLLKSDNLDLHLTPYQVLATGLEEGLVEFIPSISVAKIIQKTGSI ESYLQKCNPDEDGPFGITAQCLETFIKSCAGYSVITYILGIGDRHLDNLLLQDDGRLFHVDFSY MLGEQPHRFAPPSPPMKLCKEMVEAMGGTESEYYARFKSYCCEAYNILRKSSNLILNLFYLMTG SNIESITDKGTSK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os08g0307400_circ_g.3

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