Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d024343_circ_g.4 |
ID in PlantcircBase | zma_circ_006213 |
Alias | cold_test_circ_007227 |
Organism | Zea mays |
Position | chr10: 65883681-65883835 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d024343 |
Parent gene annotation |
Ethanolamine-phosphate cytidylyltransferase |
Parent gene strand | + |
Alternative splicing | Zm00001d024343_circ_g.1 Zm00001d024343_circ_g.2 Zm00001d024343_circ_g.3 Zm00001d024343_circ_g.5 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-Yes |
Splicing signals | GT-GA |
Number of exons covered | Zm00001d024343_T002:1 Zm00001d024343_T001:1 Zm00001d024343_T003:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.440351813 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Tang et al., 2018 |