Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G20060_circ_g.2 |
ID in PlantcircBase | ath_circ_003497 |
Alias | 1:6952827-6953012 |
Organism | Arabidpsis thaliana |
Position | chr1: 6952827-6953012 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G20060 |
Parent gene annotation |
ATP binding microtubule motor family protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 2/1 |
Tissues | root;flower |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G20060.1:1 AT1G20060.2:1 AT1G20060.5:1 AT1G20060.9:1 AT1G20060.4:1 AT1G20060.10:1 AT1G20060.7:1 AT1G20060.3:1 AT1G20060.8:1 AT1G20060.6:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.290935673 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |