Detail information of BGIOSGA032596_circ_g.3


General Information
CircRNA Name BGIOSGA032596_circ_g.3
ID in PlantcircBase osi_circ_008817
Alias Chr10:5519611_5519825(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr10: 4146348-4146562  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   i-circRNA
Identification method CIRI2, find_circ
Parent gene BGIOSGA032596
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA032596_circ_g.1 BGIOSGA032596_circ_g.2
Support reads NA
Tissues root, leaf, panicle
Exon boundary   NA-NA
Splicing signals   GT-AA
Number of exons covered 0
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GCACTTAAATGGCCTATAAGTGGGTTTGTGGGCTGGCCCTCTTGTATCCTGATAGTTTAGTATG
ATTGGTAATAATAGCAATGCTACTTTTAAATTTAAGgattttgtttagcagggatttggaaggc
acatatgttggtattctattggaatgcaagtgggctggcttttgaacccatttatgggctattc
aagtgggt
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GATTTTGTTTAGCAGGGATTTGGAAGGCACATATGTTGGTATTCTATTGGAATGCAAGTGGGCT
GGCTTTTGAACCCATTTATGGGCTATTCAAGTGGGTAAACCATAGGTTGGTGCACTTAAATGGC
CTATAAGTGGGTTTGTGGGCTGGCCCTCTTGTATCCTGATAGTTTAGTATGATTGGTAATAATA
GCAATGCTACTTTTAAATTTAAG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021