Detail information of BGIOSGA014744_circ_g.2


General Information
CircRNA Name BGIOSGA014744_circ_g.2
ID in PlantcircBase osi_circ_014561
Alias Chr04:26073041_26073260(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr4: 24174224-24174443  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA014744
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA014744_circ_g.3
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   CT-GA
Number of exons covered BGIOSGA014744-TA:2
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   ACTTTATTCTTTCTTGAACCTGGACCCGGCAGAAGAAAATCTGTCAAAGCACCCAATTTATGAA
GTTTTACGCATGCCTTTAAGCATGCATCTCTCTTAGctatcatctgaaacaaggaaacaagagt
taagccagagccagcattatgcgcttatggtactgtatgaacaagtgaaaataccttcaacttt
gttgtttg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CTATCATCTGAAACAAGGAAACAAGAGTTAAGCCAGAGCCAGCATTATGCGCTTATGGTACTGT
ATGAACAAGTGAAAATACCTTCAACTTTGTTGTTTGATGAATTATTTGTTACTGATACTTTATT
CTTTCTTGAACCTGGACCCGGCAGAAGAAAATCTGTCAAAGCACCCAATTTATGAAGTTTTACG
CATGCCTTTAAGCATGCATCTCTCTTAG
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021