Plant Circular RNA Database

Detail information of GLYMA_13G354900_circ_g.1

			
						 General Information
					
						CircRNA Name
						GLYMA_13G354900_circ_g.1
					
						ID in PlantcircBase
						gma_circ_007024
					
						Alias
						gma-circRNA1902
					
						Organism
						
							Glycine max						
					
						Position
						
							chr13: 44344392-44349014  JBrowse»						
					
						Reference genome
						
							v2.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							GLYMA_13G354900						
					
						Parent gene annotation
						
							hypothetical protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						flower bud
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						KRH23403:17
KRH23402:18

General Information
CircRNA Name	GLYMA_13G354900_circ_g.1
ID in PlantcircBase	gma_circ_007024
Alias	gma-circRNA1902
Organism	Glycine max
Position	chr13: 44344392-44349014 JBrowse»
Reference genome	v2.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	GLYMA_13G354900
Parent gene annotation	hypothetical protein
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	flower bud
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	KRH23403:17 KRH23402:18

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGCTGCTGCTTGGGGTCATACTCACCACCCTCAAACGAGTTGAACGCTTTTTCTGCGCAGCATC
ACACAAGCTGCTGCACCCACCTAACCCCGAGTTGCTcaagttcataagccttagcagcaacatt
ggcagctatgtgtgctgaaatctttctgatgttggtgaatggtgggtatatgagtcccttatca
aagttctc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1825
Transcript exons: 44344392-44344520,44344654-44344744,44344842-44344916,44
345072-44345149,44345248-44345337,44345425-44345523,4434
5613-44345666,44345781-44345828,44345933-44346031,443461
23-44346206,44346320-44346391,44346507-44346602,44346734
-44346799,44346915-44347020,44347133-44347284,44347606-4
4347680,44347809-44347929,44348725-44349014
CAAGTTCATAAGCCTTAGCAGCAACATTGGCAGCTATGTGTGCTGAAATCTTTCTGATGTTGGT
GAATGGTGGGTATATGAGTCCCTTATCAAAGTTCTCTTGGCTCACTTGTGCAGCCAAAGCCTCA
GAGGCAGCCAGAAGCAGGTCATCATGCACTCGAATGGTCCCAGACATTATTAAACCGAGACCAA
ATCCAGGGAATATGTATGCATTATTGGCCTGGCCAGGCACAAACACTTTGCCCTCGTACTCAAC
AGGGGGAAATGGACTCCCACTTGCAAAAATGGCACGTCCCTGGCTCCACTTGTAAGCTTCTTCA
GCAGTGCATTCTGACTGTGACGTAGGGTTGGAAAGAGAAAGAATAATAGGTCTCTTGTTAATAG
AAGCCATTGCCTCAATCACTTCTTTAGTAAAAGTTCTTCCTTGTCCCGATGTTCCAATCAACAC
TGTTGGCTTAATTTTATTAACAGCATCTAGAAGATTTTTAACAGGTTCATGCTCATGAGCCCAG
GGCTTCTTAAAATGTTGGAGCGAATCTTTGCGAGAACTGACAATCAATCCCTTTGAGTCCACCA
GCCAAATATTCTTGCGCACTTCCTCCAGTGGAGCATTTGTCTGTTTTGATGTTTCAAGTGCTAT
GAGTTCTGCTATGCCAGTGCCAGCCTCTCCAGCACCAAGGAATAAGAATCTGTGATCAGCTAAG
TTACCCCCAACCAACTTCAGAGATGCAACTAGTCCAGCAAGAACCACGGATGCTGTTCCCTGAA
TATCATCATTAAAGACCAGATGTGTAGATCTATATTTCTCAAGCAGATTAAAAGCATTGTGGTT
TGCAAAGTCTTCAAACTGAATTAGGACCTTTTCCCCATAAGTTTGCTTGACTGCTGTCATAAAT
TCGTGCATAAGTTCAGCATATTCCTGCCCAGTTGCTCGTCTTTGCTTTAGCCCAATATATAATT
CATCATTCAGCAGCTTCTCATTGTTTGTGCCCACATCAATTGTAATGGGTAAACAAGCTGAAGG
GCGGACTCCTCCAAGTGCTGTATATAAAGAAAGTTTTCCCACTGGTATTCCCATCCCCTGACAA
CCAAGATCCCCAAGACCCAGGATCCGTTCTCCATCAGTTACAACTATGACTTGAATGTTCTTCT
CAGGCCAATTCCTTAGTACTTCACGGATCTTTCCCTTCTCTTTCAAACTTATATAAAGACCCTG
AGGATGCATAAAGATGCTGCCATATTTCTGGCAAGCTTCACCAACAGTTGGAGTATATACAACT
GGAAGTAACTCTTCAACATGATCAATAAGAAGTTTGTAAAATAACCGTTCATTTCTCTCCTGAA
GATCCATCATTGCCATGTACTTCTGCAAAGGAACTTGATACTGGCGTACGTGCTGGATCATTTT
CTTCACCTGAGTTTCTTGAGGAATAACTGATGGGGGAAGAAGACCACGCAAGTAGTGGGCATCC
CTCTCATCTTCAGTGAAGGCCAACCCTTTGTTGAAATGGGGATCTCGCAATAGTGTATAACCAC
TGGCAACAGAAACACTCCAAGGGGTAACAAAGTGATCCTCCGTAGCCCTATCCTCGCCGTAGAC
ATCTTGAGGGCCGCCGGCGGAGATGGCGTTATCGTCCACGTCAGCCACCGTGGATTCCTTTTTC
AATTCTTTCAACGGCGTCTCCATCACAACGCTGCCGTTTCTATCACCGGACCTGCTGCTGCTGC
TGCTGCTTGGGGTCATACTCACCACCCTCAAACGAGTTGAACGCTTTTTCTGCGCAGCATCACA
CAAGCTGCTGCACCCACCTAACCCCGAGTTGCT
						
					

						Genomic sequence
						
							CAAGTTCATAAGCCTTAGCAGCAACATTGGCAGCTATGTGTGCTGAAATCTTTCTGATGTTGGT
GAATGGTGGGTATATGAGTCCCTTATCAAAGTTCTCTTGGCTCACTTGTGCAGCCAAAGCCTCA
GCTGTTCCATCAAAATCAAATAATATGACATTGTATTAATTCCAAATGTATATTTCATTCCTAC
CATGATCCTATTTTCACCTGTCCCAAACATAAGTTTGAAATTAATGTTCGCAAGTGTCTTGAGC
ACTTACAGGCAGCCAGAAGCAGGTCATCATGCACTCGAATGGTCCCAGACATTATTAAACCGAG
ACCAAATCCAGGGAATATGTATGCATTATTGGCCTGATGAACAAACAAGCAAAATCTTCAAATT
AAGACCTTATTTGAGAGGTAAATTTTTTAATGTTTAGTTAAAGTCTCAATGTCTTGTATTATAG
ACCTGGCCAGGCACAAACACTTTGCCCTCGTACTCAACAGGGGGAAATGGACTCCCACTTGCAA
AAATGGCACGTCCCTGATGGTGATACACAAGAATAAGGGAACAAAATAAAACATTTAGTATCGG
TCAATTACAAACACCTATAAGAATAAACAAAAACTGACTCTGTTAGCAGTAGAATATTGAAAGC
TTATATTCTAATGCAAAAATAAAAAGTTGCGTGTATTAACCTGGCTCCACTTGTAAGCTTCTTC
AGCAGTGCATTCTGACTGTGACGTAGGGTTGGAAAGAGAAAGAATAATAGGTCTCTGCAAGCAT
TATCATATAATAAATTGCTTAGCCTATGTTAACATGAAATCAATCCATGGTAGGTACACTAGGT
AGATAAAATAGGTTGAAATAGTACCTTGTTAATAGAAGCCATTGCCTCAATCACTTCTTTAGTA
AAAGTTCTTCCTTGTCCCGATGTTCCAATCAACACTGTTGGCTTAATTTTCTGAGAAGATAACA
TTGACCATTTAAGAACATTGAAACTTCTGCTATGCGTGTGGTGTAATGAACAGAAAGATAAAAA
AAATCATACATTAACAGCATCTAGAAGATTTTTAACAGGTTCATGCTCATGAGCCCAGGGCTTC
TTAAAATGTTGGAGCGAATCTTTGCGAGAACTGACAATCAATCCCTGTAAAAGAAGGAATAACA
GATTAATCAGATGGAAGATTAGAATTGGGTTCATACATACAGGTAGAGCTAAATTGGGTTTACA
CAAACCTTTGAGTCCACCAGCCAAATATTCTTGCGCACTTCCTCCAGTGGAGCATTTGTCTGCA
TCAACAAATGCAGTTTCTCAATAACTAAAATACTCATGCATGCTTCACATCACAACATTCTACA
CTAAAAACAACGAAAAATACAACAGCACTAAAAGTAGCTAAAAACCTGTTTTGATGTTTCAAGT
GCTATGAGTTCTGCTATGCCAGTGCCAGCCTGCAACCGCCCAACAATACAATTAAGCCAGAATG
ATAAAAACAACCTCTTCTTTCTCTAACAAACAACGAATGACACATGATCCCAGAATTATATAGA
CTCACCTCTCCAGCACCAAGGAATAAGAATCTGTGATCAGCTAAGTTACCCCCAACCAACTTCA
GAGATGCAACTAGTCCAGCAAGAACCACGGATGCTGTTCCCTGGAACAAGAGGTAGATACAATA
TTAGGGCTAGTTAAAAGTATAGCTAACAAAGTACCTGAATTCGTTATAGAAGACAGCAATTTCT
TACCTGAATATCATCATTAAAGACCAGATGTGTAGATCTATATTTCTCAAGCAGATTAAAAGCA
TTGTGGTTTGCAAAGTCTTCAAACTAAACACATGGCATAACAGATGTAGAAAACGGGAAAGTGA
AATTAGCAAATTGCCAAAGACTGCAGTCCAATAAGCCAAGAAATATTATTGTCTCTTAACACTG
CTTAATACCTGAATTAGGACCTTTTCCCCATAAGTTTGCTTGACTGCTGTCATAAATTCGTGCA
TAAGTTCAGCATATTCCTGGAATCAGAGAAGTTGGAACAATGTAAATACTGTGGCATATTAGGA
AATCGGGATGCCTGAAACTAAAAAAAATTAATTCCACACGATTCAGCAAGGCAAACAAATCATG
AACCTGCCCAGTTGCTCGTCTTTGCTTTAGCCCAATATATAATTCATCATTCAGCAGCTTCTCA
TTGTTTGTGCCCACATCAATTGTAATGGGTAAACACTGAAATAGATAACATTATAGGAGTAATA
AGAAATGGAAGTTACAATATGCACGACCAATACTTAATATCTGCAAATAAAATTTCAGTAACAT
CTTAAAACCAAGCAACAGTATGGGCCAAATATACTTACAGCTGAAGGGCGGACTCCTCCAAGTG
CTGTATATAAAGAAAGTTTTCCCACTGGTATTCCCATCCCCTGAGAATACGGCAAAGGTTAACA
AAGAAGAAATTACAACATTAGATCTCGTGATTCAATATAACTATCATAAATAATAATATATTTC
AACAAGCATAATAGAAATAGAAATTACCTGACAACCAAGATCCCCAAGACCCAGGATCCGTTCT
CCATCAGTTACAACTATGACTTGAATGTTCTTCTCAGGCCAATTCCTTAGTACTTCACGGATCT
TTCCCCTTTAAGTTTAAGTCCCATCCAAGAGACAAAGGAACAATAAAATATCAATACAAACAGT
GACCGCCTACAAAGCATTCCAGGACCATAAAGAGAAATCAAAGCCAAACTCACTTCTCTTTCAA
ACTTATATAAAGACCCTGAGGATGCATAAAGATGCTGCCATATTTCTGGCAAGCTTCACCAACA
GTTGGAGTATATACAACTGGAAGTAACTCTTCAACATGATCAATAAGAAGTTTGTAAAATAACC
GTTCATTTCTCTCCTGCAGCACACAAAATAATAAAGTGAAAGCATTAGTCCAATTCAGTAATTT
ACCAATCAAACCATGTGAAGAAACTTCCCTCAAGATATTTTACATTAAAGATGAACATTAAATC
AAAATGATAAAAAAATCAAGAGCAGAAAGCAAAGACCACAAGAATTTTGGCACTATTCATAAAG
TGTCTGTGCAAACAACAGATGGGAGAACAGAAAATCCTTCAGAGGTAGATGCAAAAATGTGTGG
ATTCATCATCCACATGCAATTTTTTCAAAATGCATTATTTAATATTTTCTTAAAAAATAATTGT
ACAAAAGGCCACACCTGAAGATCCATCATTGCCATGTACTTCTGCAAAGGAACTTGATACTGGC
GTACGTGCTGGATCATTTTCTTCACCTGCCCAATAAAGTGGCAATAACTTATAAATTGATGTTG
TGTGTAAGCACACGCACAATCTAATAGCTTTGGAAAATAAAAATAAAAAAATTAAAGTACTCAG
AATAGTTTCTGGTCAGATAATTAACCTGAGTTTCTTGAGGAATAACTGATGGGGGAAGAAGACC
ACGCAAGTAGTGGGCATCCCTCTCATCTTCAGTGAAGGCCAACCCTTTGTTGAAATGGGGATCT
CGCAATAGTGTATAACCACTAAAAAGCATAACAAGTAAGAATACGCATAATAGCTAAATAGTCT
CTGGCTATAGTACAGAAAGCAGCACACAAACATTAGAAGTATCGCCTTTTTCTCCATTTAAAAA
ATAGAATTGCACTATCAAGGGCATCGCATTCAACCATCACAACAGCAACAAACAAACACAATGG
TTCAGAAGAGAAAAAGGTGAAGGAAATGCAAACAGTTAAGATGATTAAGTACAAATTTCCATGC
AACCCCCAATTTTTTTTATATATATAAAAAGAAAGAGATATGACTGGATTTCGAAAGTCTAGTT
GCCACTGGTGTAAAAAATTTAGAAAGATGACATATTATATTCAGAACTCGTGATATTTATAGTA
ATTAATCATCACATCATAAGTGATTCAATCTGTCAAAAAAATAAACAAGGCTGCATCAGTAAAA
TTTGTTTGTTTATAATCAAATCAAAAGACAATAATGAACAAATAGCTGCAAGATACACAAAGAT
GCATAAATCACGCAAATTAACCAGCAGCATTCCAAGGATATAAAGCTGAAACGGAACCAAATTT
TTTTACCACATAAATTAACCAAACCGCAGTCACTTATTTGAGATCTCTCTTTATGCGACATAAA
AAGAAAATGATGCTTCATCCATAACAAAACACCAAAACTTGTTCGATCAGTTCTCAAGTATCCC
CAATTCAGGGACTGACAAACAAACATCCAATTTGAATCTAAAATCAAAAGAAAATGAAGGCTGA
AAAACATAAGAAAATGATCATGAAAATCAAAATCAAGAGTGTCACCTGGCAACAGAAACACTCC
AAGGGGTAACAAAGTGATCCTCCGTAGCCCTATCCTCGCCGTAGACATCTTGAGGGCCGCCGGC
GGAGATGGCGTTATCGTCCACGTCAGCCACCGTGGATTCCTTTTTCAATTCTTTCAACGGCGTC
TCCATCACAACGCTGCCGTTTCTATCACCGGACCTGCTGCTGCTGCTGCTGCTTGGGGTCATAC
TCACCACCCTCAAACGAGTTGAACGCTTTTTCTGCGCAGCATCACACAAGCTGCTGCACCCACC
TAACCCCGAGTTGCT
						
					

			
		

Sequences
Splice junction sequence	TGCTGCTGCTTGGGGTCATACTCACCACCCTCAAACGAGTTGAACGCTTTTTCTGCGCAGCATC ACACAAGCTGCTGCACCCACCTAACCCCGAGTTGCTcaagttcataagccttagcagcaacatt ggcagctatgtgtgctgaaatctttctgatgttggtgaatggtgggtatatgagtcccttatca aagttctc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1825 Transcript exons: 44344392-44344520,44344654-44344744,44344842-44344916,44 345072-44345149,44345248-44345337,44345425-44345523,4434 5613-44345666,44345781-44345828,44345933-44346031,443461 23-44346206,44346320-44346391,44346507-44346602,44346734 -44346799,44346915-44347020,44347133-44347284,44347606-4 4347680,44347809-44347929,44348725-44349014 CAAGTTCATAAGCCTTAGCAGCAACATTGGCAGCTATGTGTGCTGAAATCTTTCTGATGTTGGT GAATGGTGGGTATATGAGTCCCTTATCAAAGTTCTCTTGGCTCACTTGTGCAGCCAAAGCCTCA GAGGCAGCCAGAAGCAGGTCATCATGCACTCGAATGGTCCCAGACATTATTAAACCGAGACCAA ATCCAGGGAATATGTATGCATTATTGGCCTGGCCAGGCACAAACACTTTGCCCTCGTACTCAAC AGGGGGAAATGGACTCCCACTTGCAAAAATGGCACGTCCCTGGCTCCACTTGTAAGCTTCTTCA GCAGTGCATTCTGACTGTGACGTAGGGTTGGAAAGAGAAAGAATAATAGGTCTCTTGTTAATAG AAGCCATTGCCTCAATCACTTCTTTAGTAAAAGTTCTTCCTTGTCCCGATGTTCCAATCAACAC TGTTGGCTTAATTTTATTAACAGCATCTAGAAGATTTTTAACAGGTTCATGCTCATGAGCCCAG GGCTTCTTAAAATGTTGGAGCGAATCTTTGCGAGAACTGACAATCAATCCCTTTGAGTCCACCA GCCAAATATTCTTGCGCACTTCCTCCAGTGGAGCATTTGTCTGTTTTGATGTTTCAAGTGCTAT GAGTTCTGCTATGCCAGTGCCAGCCTCTCCAGCACCAAGGAATAAGAATCTGTGATCAGCTAAG TTACCCCCAACCAACTTCAGAGATGCAACTAGTCCAGCAAGAACCACGGATGCTGTTCCCTGAA TATCATCATTAAAGACCAGATGTGTAGATCTATATTTCTCAAGCAGATTAAAAGCATTGTGGTT TGCAAAGTCTTCAAACTGAATTAGGACCTTTTCCCCATAAGTTTGCTTGACTGCTGTCATAAAT TCGTGCATAAGTTCAGCATATTCCTGCCCAGTTGCTCGTCTTTGCTTTAGCCCAATATATAATT CATCATTCAGCAGCTTCTCATTGTTTGTGCCCACATCAATTGTAATGGGTAAACAAGCTGAAGG GCGGACTCCTCCAAGTGCTGTATATAAAGAAAGTTTTCCCACTGGTATTCCCATCCCCTGACAA CCAAGATCCCCAAGACCCAGGATCCGTTCTCCATCAGTTACAACTATGACTTGAATGTTCTTCT CAGGCCAATTCCTTAGTACTTCACGGATCTTTCCCTTCTCTTTCAAACTTATATAAAGACCCTG AGGATGCATAAAGATGCTGCCATATTTCTGGCAAGCTTCACCAACAGTTGGAGTATATACAACT GGAAGTAACTCTTCAACATGATCAATAAGAAGTTTGTAAAATAACCGTTCATTTCTCTCCTGAA GATCCATCATTGCCATGTACTTCTGCAAAGGAACTTGATACTGGCGTACGTGCTGGATCATTTT CTTCACCTGAGTTTCTTGAGGAATAACTGATGGGGGAAGAAGACCACGCAAGTAGTGGGCATCC CTCTCATCTTCAGTGAAGGCCAACCCTTTGTTGAAATGGGGATCTCGCAATAGTGTATAACCAC TGGCAACAGAAACACTCCAAGGGGTAACAAAGTGATCCTCCGTAGCCCTATCCTCGCCGTAGAC ATCTTGAGGGCCGCCGGCGGAGATGGCGTTATCGTCCACGTCAGCCACCGTGGATTCCTTTTTC AATTCTTTCAACGGCGTCTCCATCACAACGCTGCCGTTTCTATCACCGGACCTGCTGCTGCTGC TGCTGCTTGGGGTCATACTCACCACCCTCAAACGAGTTGAACGCTTTTTCTGCGCAGCATCACA CAAGCTGCTGCACCCACCTAACCCCGAGTTGCT
Genomic sequence	CAAGTTCATAAGCCTTAGCAGCAACATTGGCAGCTATGTGTGCTGAAATCTTTCTGATGTTGGT GAATGGTGGGTATATGAGTCCCTTATCAAAGTTCTCTTGGCTCACTTGTGCAGCCAAAGCCTCA GCTGTTCCATCAAAATCAAATAATATGACATTGTATTAATTCCAAATGTATATTTCATTCCTAC CATGATCCTATTTTCACCTGTCCCAAACATAAGTTTGAAATTAATGTTCGCAAGTGTCTTGAGC ACTTACAGGCAGCCAGAAGCAGGTCATCATGCACTCGAATGGTCCCAGACATTATTAAACCGAG ACCAAATCCAGGGAATATGTATGCATTATTGGCCTGATGAACAAACAAGCAAAATCTTCAAATT AAGACCTTATTTGAGAGGTAAATTTTTTAATGTTTAGTTAAAGTCTCAATGTCTTGTATTATAG ACCTGGCCAGGCACAAACACTTTGCCCTCGTACTCAACAGGGGGAAATGGACTCCCACTTGCAA AAATGGCACGTCCCTGATGGTGATACACAAGAATAAGGGAACAAAATAAAACATTTAGTATCGG TCAATTACAAACACCTATAAGAATAAACAAAAACTGACTCTGTTAGCAGTAGAATATTGAAAGC TTATATTCTAATGCAAAAATAAAAAGTTGCGTGTATTAACCTGGCTCCACTTGTAAGCTTCTTC AGCAGTGCATTCTGACTGTGACGTAGGGTTGGAAAGAGAAAGAATAATAGGTCTCTGCAAGCAT TATCATATAATAAATTGCTTAGCCTATGTTAACATGAAATCAATCCATGGTAGGTACACTAGGT AGATAAAATAGGTTGAAATAGTACCTTGTTAATAGAAGCCATTGCCTCAATCACTTCTTTAGTA AAAGTTCTTCCTTGTCCCGATGTTCCAATCAACACTGTTGGCTTAATTTTCTGAGAAGATAACA TTGACCATTTAAGAACATTGAAACTTCTGCTATGCGTGTGGTGTAATGAACAGAAAGATAAAAA AAATCATACATTAACAGCATCTAGAAGATTTTTAACAGGTTCATGCTCATGAGCCCAGGGCTTC TTAAAATGTTGGAGCGAATCTTTGCGAGAACTGACAATCAATCCCTGTAAAAGAAGGAATAACA GATTAATCAGATGGAAGATTAGAATTGGGTTCATACATACAGGTAGAGCTAAATTGGGTTTACA CAAACCTTTGAGTCCACCAGCCAAATATTCTTGCGCACTTCCTCCAGTGGAGCATTTGTCTGCA TCAACAAATGCAGTTTCTCAATAACTAAAATACTCATGCATGCTTCACATCACAACATTCTACA CTAAAAACAACGAAAAATACAACAGCACTAAAAGTAGCTAAAAACCTGTTTTGATGTTTCAAGT GCTATGAGTTCTGCTATGCCAGTGCCAGCCTGCAACCGCCCAACAATACAATTAAGCCAGAATG ATAAAAACAACCTCTTCTTTCTCTAACAAACAACGAATGACACATGATCCCAGAATTATATAGA CTCACCTCTCCAGCACCAAGGAATAAGAATCTGTGATCAGCTAAGTTACCCCCAACCAACTTCA GAGATGCAACTAGTCCAGCAAGAACCACGGATGCTGTTCCCTGGAACAAGAGGTAGATACAATA TTAGGGCTAGTTAAAAGTATAGCTAACAAAGTACCTGAATTCGTTATAGAAGACAGCAATTTCT TACCTGAATATCATCATTAAAGACCAGATGTGTAGATCTATATTTCTCAAGCAGATTAAAAGCA TTGTGGTTTGCAAAGTCTTCAAACTAAACACATGGCATAACAGATGTAGAAAACGGGAAAGTGA AATTAGCAAATTGCCAAAGACTGCAGTCCAATAAGCCAAGAAATATTATTGTCTCTTAACACTG CTTAATACCTGAATTAGGACCTTTTCCCCATAAGTTTGCTTGACTGCTGTCATAAATTCGTGCA TAAGTTCAGCATATTCCTGGAATCAGAGAAGTTGGAACAATGTAAATACTGTGGCATATTAGGA AATCGGGATGCCTGAAACTAAAAAAAATTAATTCCACACGATTCAGCAAGGCAAACAAATCATG AACCTGCCCAGTTGCTCGTCTTTGCTTTAGCCCAATATATAATTCATCATTCAGCAGCTTCTCA TTGTTTGTGCCCACATCAATTGTAATGGGTAAACACTGAAATAGATAACATTATAGGAGTAATA AGAAATGGAAGTTACAATATGCACGACCAATACTTAATATCTGCAAATAAAATTTCAGTAACAT CTTAAAACCAAGCAACAGTATGGGCCAAATATACTTACAGCTGAAGGGCGGACTCCTCCAAGTG CTGTATATAAAGAAAGTTTTCCCACTGGTATTCCCATCCCCTGAGAATACGGCAAAGGTTAACA AAGAAGAAATTACAACATTAGATCTCGTGATTCAATATAACTATCATAAATAATAATATATTTC AACAAGCATAATAGAAATAGAAATTACCTGACAACCAAGATCCCCAAGACCCAGGATCCGTTCT CCATCAGTTACAACTATGACTTGAATGTTCTTCTCAGGCCAATTCCTTAGTACTTCACGGATCT TTCCCCTTTAAGTTTAAGTCCCATCCAAGAGACAAAGGAACAATAAAATATCAATACAAACAGT GACCGCCTACAAAGCATTCCAGGACCATAAAGAGAAATCAAAGCCAAACTCACTTCTCTTTCAA ACTTATATAAAGACCCTGAGGATGCATAAAGATGCTGCCATATTTCTGGCAAGCTTCACCAACA GTTGGAGTATATACAACTGGAAGTAACTCTTCAACATGATCAATAAGAAGTTTGTAAAATAACC GTTCATTTCTCTCCTGCAGCACACAAAATAATAAAGTGAAAGCATTAGTCCAATTCAGTAATTT ACCAATCAAACCATGTGAAGAAACTTCCCTCAAGATATTTTACATTAAAGATGAACATTAAATC AAAATGATAAAAAAATCAAGAGCAGAAAGCAAAGACCACAAGAATTTTGGCACTATTCATAAAG TGTCTGTGCAAACAACAGATGGGAGAACAGAAAATCCTTCAGAGGTAGATGCAAAAATGTGTGG ATTCATCATCCACATGCAATTTTTTCAAAATGCATTATTTAATATTTTCTTAAAAAATAATTGT ACAAAAGGCCACACCTGAAGATCCATCATTGCCATGTACTTCTGCAAAGGAACTTGATACTGGC GTACGTGCTGGATCATTTTCTTCACCTGCCCAATAAAGTGGCAATAACTTATAAATTGATGTTG TGTGTAAGCACACGCACAATCTAATAGCTTTGGAAAATAAAAATAAAAAAATTAAAGTACTCAG AATAGTTTCTGGTCAGATAATTAACCTGAGTTTCTTGAGGAATAACTGATGGGGGAAGAAGACC ACGCAAGTAGTGGGCATCCCTCTCATCTTCAGTGAAGGCCAACCCTTTGTTGAAATGGGGATCT CGCAATAGTGTATAACCACTAAAAAGCATAACAAGTAAGAATACGCATAATAGCTAAATAGTCT CTGGCTATAGTACAGAAAGCAGCACACAAACATTAGAAGTATCGCCTTTTTCTCCATTTAAAAA ATAGAATTGCACTATCAAGGGCATCGCATTCAACCATCACAACAGCAACAAACAAACACAATGG TTCAGAAGAGAAAAAGGTGAAGGAAATGCAAACAGTTAAGATGATTAAGTACAAATTTCCATGC AACCCCCAATTTTTTTTATATATATAAAAAGAAAGAGATATGACTGGATTTCGAAAGTCTAGTT GCCACTGGTGTAAAAAATTTAGAAAGATGACATATTATATTCAGAACTCGTGATATTTATAGTA ATTAATCATCACATCATAAGTGATTCAATCTGTCAAAAAAATAAACAAGGCTGCATCAGTAAAA TTTGTTTGTTTATAATCAAATCAAAAGACAATAATGAACAAATAGCTGCAAGATACACAAAGAT GCATAAATCACGCAAATTAACCAGCAGCATTCCAAGGATATAAAGCTGAAACGGAACCAAATTT TTTTACCACATAAATTAACCAAACCGCAGTCACTTATTTGAGATCTCTCTTTATGCGACATAAA AAGAAAATGATGCTTCATCCATAACAAAACACCAAAACTTGTTCGATCAGTTCTCAAGTATCCC CAATTCAGGGACTGACAAACAAACATCCAATTTGAATCTAAAATCAAAAGAAAATGAAGGCTGA AAAACATAAGAAAATGATCATGAAAATCAAAATCAAGAGTGTCACCTGGCAACAGAAACACTCC AAGGGGTAACAAAGTGATCCTCCGTAGCCCTATCCTCGCCGTAGACATCTTGAGGGCCGCCGGC GGAGATGGCGTTATCGTCCACGTCAGCCACCGTGGATTCCTTTTTCAATTCTTTCAACGGCGTC TCCATCACAACGCTGCCGTTTCTATCACCGGACCTGCTGCTGCTGCTGCTGCTTGGGGTCATAC TCACCACCCTCAAACGAGTTGAACGCTTTTTCTGCGCAGCATCACACAAGCTGCTGCACCCACC TAACCCCGAGTTGCT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.160513451

Conservation Information
Conserved circRNAs	NA
PMCS	0.160513451

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							44348813-44344434(+)
44348935-44348979(-)
44344420-44348979(-)
						
					

						Potential amino acid sequence
						
							MALSSTSATVDSFFNSFNGVSITTLPFLSPDLLLLLLLGVILTTLKRVERFFCAASHKLLHPPN
PELLKFISLSSNIGSYVC*(+)
MTPSSSSSSRSGDRNGSVVMETPLKELKKESTVADVDDNAISAGGPQDVYGEDRATEDHFVTPW
SVSVASGYTLLRDPHFNKGLAFTEDERDAHYLRGLLPPSVIPQETQVKKMIQHVRQYQVPLQKY
MAMMDLQERNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFMHPQGLYISLKEKGKIREV
LRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNE
KLLNDELYIGLKQRRATGQEYAELMHEFMTAVKQTYGEKVLIQFEDFANHNAFNLLEKYRSTHL
VFNDDIQGTASVVLAGLVASLKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEV
RKNIWLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVKNLLDAVNKIKPTVLIGTSGQGRTFTKEV
IEAMASINKRPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPPVEYEGKVFVPGQANNA
YIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVSQENFDKGLIYPPFTNIRKISAHIAANVAA
KAYELEQLGVRWVQQLV*(-)
MLLLRLMNLSNSGLGGCSSLCDAAQKKRSTRLRVVSMTPSSSSSSRSGDRNGSVVMETPLKELK
KESTVADVDDNAISAGGPQDVYGEDRATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTEDERD
AHYLRGLLPPSVIPQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIDHVEELLPV
VYTPTVGEACQKYGSIFMHPQGLYISLKEKGKIREVLRNWPEKNIQVIVVTDGERILGLGDLGC
QGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYAELMHEF
MTAVKQTYGEKVLIQFEDFANHNAFNLLEKYRSTHLVFNDDIQGTASVVLAGLVASLKLVGGNL
ADHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEVRKNIWLVDSKGLIVSSRKDSLQHFKKPW
AHEHEPVKNLLDAVNKIKPTVLIGTSGQGRTFTKEVIEAMASINKRPIILSLSNPTSQSECTAE
EAYKWSQGRAIFASGSPFPPVEYEGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASE
ALAAQVSQENFDKGLIYPPFTNIRKISAHIAANVAAKAYELEQLGVRWVQQLV*(-)
						
					

						Sponge-miRNAs
						
							gma-miR5040 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	44348813-44344434(+) 44348935-44348979(-) 44344420-44348979(-)
Potential amino acid sequence	MALSSTSATVDSFFNSFNGVSITTLPFLSPDLLLLLLLGVILTTLKRVERFFCAASHKLLHPPN PELLKFISLSSNIGSYVC(+) MTPSSSSSSRSGDRNGSVVMETPLKELKKESTVADVDDNAISAGGPQDVYGEDRATEDHFVTPW SVSVASGYTLLRDPHFNKGLAFTEDERDAHYLRGLLPPSVIPQETQVKKMIQHVRQYQVPLQKY MAMMDLQERNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFMHPQGLYISLKEKGKIREV LRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNE KLLNDELYIGLKQRRATGQEYAELMHEFMTAVKQTYGEKVLIQFEDFANHNAFNLLEKYRSTHL VFNDDIQGTASVVLAGLVASLKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEV RKNIWLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVKNLLDAVNKIKPTVLIGTSGQGRTFTKEV IEAMASINKRPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPPVEYEGKVFVPGQANNA YIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVSQENFDKGLIYPPFTNIRKISAHIAANVAA KAYELEQLGVRWVQQLV(-) MLLLRLMNLSNSGLGGCSSLCDAAQKKRSTRLRVVSMTPSSSSSSRSGDRNGSVVMETPLKELK KESTVADVDDNAISAGGPQDVYGEDRATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTEDERD AHYLRGLLPPSVIPQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIDHVEELLPV VYTPTVGEACQKYGSIFMHPQGLYISLKEKGKIREVLRNWPEKNIQVIVVTDGERILGLGDLGC QGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYAELMHEF MTAVKQTYGEKVLIQFEDFANHNAFNLLEKYRSTHLVFNDDIQGTASVVLAGLVASLKLVGGNL ADHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEVRKNIWLVDSKGLIVSSRKDSLQHFKKPW AHEHEPVKNLLDAVNKIKPTVLIGTSGQGRTFTKEVIEAMASINKRPIILSLSNPTSQSECTAE EAYKWSQGRAIFASGSPFPPVEYEGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASE ALAAQVSQENFDKGLIYPPFTNIRKISAHIAANVAAKAYELEQLGVRWVQQLV*(-)
Sponge-miRNAs	gma-miR5040
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chen et al., 2018

circRNA

Detail information of GLYMA_13G354900_circ_g.1

Address

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