Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d048157_circ_ag.1 |
ID in PlantcircBase | zma_circ_005998 |
Alias | seedlingd_test_circ_002114 |
Organism | Zea mays |
Position | chr9: 151092966-151102478 JBrowse» |
Reference genome | AGPv4.38 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Zm00001d048157_circ_ag.2 Zm00001d048157_circ_ag.3 Zm00001d048157_circ_ag.4 Zm00001d048157_circ_ag.5 Zm00001d048157_circ_ag.6 Zm00001d048157_circ_ag.7 Zm00001d048158_circ_ag.1 |
Support reads | NA |
Tissues | seedling |
Exon boundary | NA-NA |
Splicing signals | CT-TA |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.619199605 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | zma-miR166l-5p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |