Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d046613_circ_g.1 |
ID in PlantcircBase | zma_circ_005904 |
Alias | seedlingd_test_circ_000485 |
Organism | Zea mays |
Position | chr9: 98840141-98842421 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d046613 |
Parent gene annotation |
Elongator complex protein 4 |
Parent gene strand | + |
Alternative splicing | Zm00001d046613_circ_igg.1 Zm00001d046613_circ_igg.2 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d046613_T005:1 Zm00001d046613_T004:1 Zm00001d046613_T003:1 Zm00001d046613_T007:1 Zm00001d046613_T009:1 Zm00001d046613_T002:1 Zm00001d046613_T006:1 Zm00001d046613_T014:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.035583772 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |