Plant Circular RNA Database

Detail information of Zm00001d040795_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d040795_circ_g.1
					
						ID in PlantcircBase
						zma_circ_007579
					
						Alias
						Zm03circ00025, zma_circ_0001065
					
						Organism
						
							Zea mays						
					
						Position
						
							chr3: 66300976-66303626  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d040795						
					
						Parent gene annotation
						
							Chaperone DnaJ-domain superfamily protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d040795_T002:5
Zm00001d040795_T003:5
Zm00001d040795_T001:5

General Information
CircRNA Name	Zm00001d040795_circ_g.1
ID in PlantcircBase	zma_circ_007579
Alias	Zm03circ00025, zma_circ_0001065
Organism	Zea mays
Position	chr3: 66300976-66303626 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d040795
Parent gene annotation	Chaperone DnaJ-domain superfamily protein
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d040795_T002:5 Zm00001d040795_T003:5 Zm00001d040795_T001:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTGTGTACCACCTAAAGTAACGAAAGGATCTTCTGGCATGCTCATGCTAATTTTGCTAGAGGAA
ATTGATTCACTTTCTTGTCTCGTTATAGGTTCCTCCatattgcaacgttgttagcaaggcccgt
aggttgccttctttgccagcagcccacctctttatctcaaaatcaagtgattcaccaattctct
gaaaaaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2131
Transcript exons: 66300976-66301065,66301163-66301228,66301312-66301409,66
301665-66301794,66301880-66303626
ATATTGCAACGTTGTTAGCAAGGCCCGTAGGTTGCCTTCTTTGCCAGCAGCCCACCTCTTTATC
TCAAAATCAAGTGATTCACCAATTCTATGTCGCTCTTCTTGCTCCTGCTGAGCTTGCAAGTCAC
GCTCATTCTTCTCAGCAAGAGCTTTTGCCGCACGCTCCATTGTTCTTTGGTGTCGTTCCAATCT
TGCCTTCCTTCTCTCTTCACTCTCTCCATCCACTTCTTGAAATACAGCAGATGGTAAAGGTGCT
CCAAATATAGAAGATAGGCCATCCATAAGATTGCTTGATGAAGGCTGAGTAAAGGGAAAACCTG
AACCAGAAGGTGTCCTCCTTACACCACCAGAACCAGCATTGCCAGGTTGAACATCGAAAGGATT
CGTTGTTGTGTTGTTGTATGATCTCGGTAGACTACTTGATCGAGAAGGCATGCCAAAGAATGAC
TCAAGGTCAGGTTCTGTTGTTGCTCTCCTTTGCTGATTTTCTCTTGCCAGTGCTTCAGCTGCAG
CTGCAGCGGCAGCCCTTTCTCTAGCATCATTAAAAGCCCTTTGCTTAACTTCAGTAGCAACCCT
CTCGAAAGCTGCTCTTTCAGCCCTCCACCGTGCTTCTGCTGCAGCTTTCTCAACAGCAGCTCGC
TCAGCCTTTGCCCGAGCTTCTGCAGTAGCTTTCTCCTGAAATTCTGCTGTTTCCTTTTCCCTAG
CTTCAGCAGCAGCCCTAGCAGCTCTTTCCCTTGCATCTGCGGCAACTTTGGCATCCCTTTCCCT
TGATTCTGTTGCAGCCCTTTCTCTAGCCTCTGCTGCTTCTCTTTCCTTAGCTTCTGCAGCAGCC
TTCGCAGCTCTTTCCTTTGCCTCCACTGCAGCTCTCTCACGAGCTTCTGTTGCTGCTTTCCATA
CTGCAGCTCGCTCTGCTCTTTGACGAGCCTCCTTCTCAGCTTGCATGCGTGCTTCAGCAGCTGA
TCTTTCGCGTGCCTCCCGTATAGCCTTATCTACAGCCTGCCTGGCCACTCTTTCTTTTTCACGC
CTCCTCTGCTCCTCTTGTTCCCTTTGTCTCACATTTTCTCTTTCCCTCTCAAGCTCTTCTTCCA
TCTCCCTTTCTGCTCTTATTTGCTCTTCTTTATGTTCTCTTTGTATTTGTTCATTCTCTAATCT
CTTTTCTTCATCTGTACTTTCTGTTTCATGAGCACATACCTCTGCTTTCTCATCTATTTCTGGC
TGTCGATATTGACTGCTAGTGAACATAGAATCAAATGCCCCTTGGTTCCCCCTTTTACAGTGTC
CCATCTCAGTCCAGTCCATGAAACTTGCAGTAGCTGCAGATGGATAATGCCCATTTCCTTCATG
CTTTAGAACTTGTGGATGACCAATGGCAGAATTTGCAGGCTTTGTCAAGAAAAAATCTTCCAAT
TCATCAATTTGGGATGTTTTAGAGGTGTTTGAAGAACATATGGAGTGATGGTAGCGTTGATTAC
AATGATGGGCATATGCTTCACTAGTTACAGATTCAGTAGGTGGTTTCTTAGCAGCAAGTGGAGG
TGGAGGCCTTGAAGGAGGTGGCGCACTTGTAGGTAGTGTCACTAAAGCAATATCTAAAACAGTT
AGCCACACATCATTAGTCGTTTGTGAAGATTGATTCACCTCTAACAAATCGTCTTCCTCAACAA
ATGGGTTCAATGTCTGAAAACTAGTGGTAACAGGTACTTCATGGACAACAGATGCTTCAGGGAA
GTTCATCTCAGTCAATGTATTGGCAGGTGCTTCTGTTGATGCTTGTTGGACTGTCTTCTCCTGA
GGCAGCCGATCGGAGTGACTCGTGCTGATTATGTTTTCAGTATATCTCCTTTCAGTTCTATCAC
TCTGGTTTTCAGATGTAAACGAAAAGGGTGGCATGGCTTTTGGAAACTCAGTAAAGATATCAGA
ACCCTGAAATATCCCACTGGTATTATCAGGCGTTGTGTCCGCTTCCTTTCTAGGCATGCCAATG
TTATTCAGAAGATTTGAAAACAACCCTAAAGATGAATATCCCGATTTGTGTGTACCACCTAAAG
TAACGAAAGGATCTTCTGGCATGCTCATGCTAATTTTGCTAGAGGAAATTGATTCACTTTCTTG
TCTCGTTATAGGTTCCTCC
						
					

						Genomic sequence
						
							ATATTGCAACGTTGTTAGCAAGGCCCGTAGGTTGCCTTCTTTGCCAGCAGCCCACCTCTTTATC
TCAAAATCAAGTGATTCACCAATTCTCTGAAAAAAAGAAACCACATTACCTCAAAAAATCAAAC
TATCTAATTCATTTATCTACTTAAAGTCCAGAATCAGTATGATAAGATACAGAGCTTACATGTC
GCTCTTCTTGCTCCTGCTGAGCTTGCAAGTCACGCTCATTCTTCTCAGCAAGAGCTTTTGCCTG
AAAAATATCATATGAACAGATAGTTACTTTTATAATTACTAAACGACAGGTAGTTGCAGATTGA
TTATAGGTTAGCATACCGCACGCTCCATTGTTCTTTGGTGTCGTTCCAATCTTGCCTTCCTTCT
CTCTTCACTCTCTCCATCCACTTCTTGAAATACAGCAGATGGTAAAGGTGCTATATATGAAAAA
TATAAAACGAGGTTAGTGCTTCATATACTCAAAGTGTGCTAAGGTAGTCCTTCTGTACTAAAAA
ACATTAATTTTAAACGCTGTAGGGTGACTGAGTCATGACCACTCCTATCTCCACAACTAGCATC
ATTGGTTGGCATCTTTAATCAACATGTGCTATAATTGATTTGTGCAAATTAGTTCCTAATATAG
CTCAGAAAAAACTGCTAATAATAGTAAATGTTCAAATATTAAATAGTACCTCCAAATATAGAAG
ATAGGCCATCCATAAGATTGCTTGATGAAGGCTGAGTAAAGGGAAAACCTGAACCAGAAGGTGT
CCTCCTTACACCACCAGAACCAGCATTGCCAGGTTGAACATCGAAAGGATTCTGAAAAAAAATA
GAAGCAGCAGAGAATCAAAGTTAAACAGAAAATTTTCATACAAAATAACTCATGCAGTTGTTCA
GTTCTCACCGTTGTTGTGTTGTTGTATGATCTCGGTAGACTACTTGATCGAGAAGGCATGCCAA
AGAATGACTCAAGGTCAGGTTCTGTTGTTGCTCTCCTTTGCTGATTTTCTCTTGCCAGTGCTTC
AGCTGCAGCTGCAGCGGCAGCCCTTTCTCTAGCATCATTAAAAGCCCTTTGCTTAACTTCAGTA
GCAACCCTCTCGAAAGCTGCTCTTTCAGCCCTCCACCGTGCTTCTGCTGCAGCTTTCTCAACAG
CAGCTCGCTCAGCCTTTGCCCGAGCTTCTGCAGTAGCTTTCTCCTGAAATTCTGCTGTTTCCTT
TTCCCTAGCTTCAGCAGCAGCCCTAGCAGCTCTTTCCCTTGCATCTGCGGCAACTTTGGCATCC
CTTTCCCTTGATTCTGTTGCAGCCCTTTCTCTAGCCTCTGCTGCTTCTCTTTCCTTAGCTTCTG
CAGCAGCCTTCGCAGCTCTTTCCTTTGCCTCCACTGCAGCTCTCTCACGAGCTTCTGTTGCTGC
TTTCCATACTGCAGCTCGCTCTGCTCTTTGACGAGCCTCCTTCTCAGCTTGCATGCGTGCTTCA
GCAGCTGATCTTTCGCGTGCCTCCCGTATAGCCTTATCTACAGCCTGCCTGGCCACTCTTTCTT
TTTCACGCCTCCTCTGCTCCTCTTGTTCCCTTTGTCTCACATTTTCTCTTTCCCTCTCAAGCTC
TTCTTCCATCTCCCTTTCTGCTCTTATTTGCTCTTCTTTATGTTCTCTTTGTATTTGTTCATTC
TCTAATCTCTTTTCTTCATCTGTACTTTCTGTTTCATGAGCACATACCTCTGCTTTCTCATCTA
TTTCTGGCTGTCGATATTGACTGCTAGTGAACATAGAATCAAATGCCCCTTGGTTCCCCCTTTT
ACAGTGTCCCATCTCAGTCCAGTCCATGAAACTTGCAGTAGCTGCAGATGGATAATGCCCATTT
CCTTCATGCTTTAGAACTTGTGGATGACCAATGGCAGAATTTGCAGGCTTTGTCAAGAAAAAAT
CTTCCAATTCATCAATTTGGGATGTTTTAGAGGTGTTTGAAGAACATATGGAGTGATGGTAGCG
TTGATTACAATGATGGGCATATGCTTCACTAGTTACAGATTCAGTAGGTGGTTTCTTAGCAGCA
AGTGGAGGTGGAGGCCTTGAAGGAGGTGGCGCACTTGTAGGTAGTGTCACTAAAGCAATATCTA
AAACAGTTAGCCACACATCATTAGTCGTTTGTGAAGATTGATTCACCTCTAACAAATCGTCTTC
CTCAACAAATGGGTTCAATGTCTGAAAACTAGTGGTAACAGGTACTTCATGGACAACAGATGCT
TCAGGGAAGTTCATCTCAGTCAATGTATTGGCAGGTGCTTCTGTTGATGCTTGTTGGACTGTCT
TCTCCTGAGGCAGCCGATCGGAGTGACTCGTGCTGATTATGTTTTCAGTATATCTCCTTTCAGT
TCTATCACTCTGGTTTTCAGATGTAAACGAAAAGGGTGGCATGGCTTTTGGAAACTCAGTAAAG
ATATCAGAACCCTGAAATATCCCACTGGTATTATCAGGCGTTGTGTCCGCTTCCTTTCTAGGCA
TGCCAATGTTATTCAGAAGATTTGAAAACAACCCTAAAGATGAATATCCCGATTTGTGTGTACC
ACCTAAAGTAACGAAAGGATCTTCTGGCATGCTCATGCTAATTTTGCTAGAGGAAATTGATTCA
CTTTCTTGTCTCGTTATAGGTTCCTCC
						
					

			
		

Sequences
Splice junction sequence	GTGTGTACCACCTAAAGTAACGAAAGGATCTTCTGGCATGCTCATGCTAATTTTGCTAGAGGAA ATTGATTCACTTTCTTGTCTCGTTATAGGTTCCTCCatattgcaacgttgttagcaaggcccgt aggttgccttctttgccagcagcccacctctttatctcaaaatcaagtgattcaccaattctct gaaaaaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2131 Transcript exons: 66300976-66301065,66301163-66301228,66301312-66301409,66 301665-66301794,66301880-66303626 ATATTGCAACGTTGTTAGCAAGGCCCGTAGGTTGCCTTCTTTGCCAGCAGCCCACCTCTTTATC TCAAAATCAAGTGATTCACCAATTCTATGTCGCTCTTCTTGCTCCTGCTGAGCTTGCAAGTCAC GCTCATTCTTCTCAGCAAGAGCTTTTGCCGCACGCTCCATTGTTCTTTGGTGTCGTTCCAATCT TGCCTTCCTTCTCTCTTCACTCTCTCCATCCACTTCTTGAAATACAGCAGATGGTAAAGGTGCT CCAAATATAGAAGATAGGCCATCCATAAGATTGCTTGATGAAGGCTGAGTAAAGGGAAAACCTG AACCAGAAGGTGTCCTCCTTACACCACCAGAACCAGCATTGCCAGGTTGAACATCGAAAGGATT CGTTGTTGTGTTGTTGTATGATCTCGGTAGACTACTTGATCGAGAAGGCATGCCAAAGAATGAC TCAAGGTCAGGTTCTGTTGTTGCTCTCCTTTGCTGATTTTCTCTTGCCAGTGCTTCAGCTGCAG CTGCAGCGGCAGCCCTTTCTCTAGCATCATTAAAAGCCCTTTGCTTAACTTCAGTAGCAACCCT CTCGAAAGCTGCTCTTTCAGCCCTCCACCGTGCTTCTGCTGCAGCTTTCTCAACAGCAGCTCGC TCAGCCTTTGCCCGAGCTTCTGCAGTAGCTTTCTCCTGAAATTCTGCTGTTTCCTTTTCCCTAG CTTCAGCAGCAGCCCTAGCAGCTCTTTCCCTTGCATCTGCGGCAACTTTGGCATCCCTTTCCCT TGATTCTGTTGCAGCCCTTTCTCTAGCCTCTGCTGCTTCTCTTTCCTTAGCTTCTGCAGCAGCC TTCGCAGCTCTTTCCTTTGCCTCCACTGCAGCTCTCTCACGAGCTTCTGTTGCTGCTTTCCATA CTGCAGCTCGCTCTGCTCTTTGACGAGCCTCCTTCTCAGCTTGCATGCGTGCTTCAGCAGCTGA TCTTTCGCGTGCCTCCCGTATAGCCTTATCTACAGCCTGCCTGGCCACTCTTTCTTTTTCACGC CTCCTCTGCTCCTCTTGTTCCCTTTGTCTCACATTTTCTCTTTCCCTCTCAAGCTCTTCTTCCA TCTCCCTTTCTGCTCTTATTTGCTCTTCTTTATGTTCTCTTTGTATTTGTTCATTCTCTAATCT CTTTTCTTCATCTGTACTTTCTGTTTCATGAGCACATACCTCTGCTTTCTCATCTATTTCTGGC TGTCGATATTGACTGCTAGTGAACATAGAATCAAATGCCCCTTGGTTCCCCCTTTTACAGTGTC CCATCTCAGTCCAGTCCATGAAACTTGCAGTAGCTGCAGATGGATAATGCCCATTTCCTTCATG CTTTAGAACTTGTGGATGACCAATGGCAGAATTTGCAGGCTTTGTCAAGAAAAAATCTTCCAAT TCATCAATTTGGGATGTTTTAGAGGTGTTTGAAGAACATATGGAGTGATGGTAGCGTTGATTAC AATGATGGGCATATGCTTCACTAGTTACAGATTCAGTAGGTGGTTTCTTAGCAGCAAGTGGAGG TGGAGGCCTTGAAGGAGGTGGCGCACTTGTAGGTAGTGTCACTAAAGCAATATCTAAAACAGTT AGCCACACATCATTAGTCGTTTGTGAAGATTGATTCACCTCTAACAAATCGTCTTCCTCAACAA ATGGGTTCAATGTCTGAAAACTAGTGGTAACAGGTACTTCATGGACAACAGATGCTTCAGGGAA GTTCATCTCAGTCAATGTATTGGCAGGTGCTTCTGTTGATGCTTGTTGGACTGTCTTCTCCTGA GGCAGCCGATCGGAGTGACTCGTGCTGATTATGTTTTCAGTATATCTCCTTTCAGTTCTATCAC TCTGGTTTTCAGATGTAAACGAAAAGGGTGGCATGGCTTTTGGAAACTCAGTAAAGATATCAGA ACCCTGAAATATCCCACTGGTATTATCAGGCGTTGTGTCCGCTTCCTTTCTAGGCATGCCAATG TTATTCAGAAGATTTGAAAACAACCCTAAAGATGAATATCCCGATTTGTGTGTACCACCTAAAG TAACGAAAGGATCTTCTGGCATGCTCATGCTAATTTTGCTAGAGGAAATTGATTCACTTTCTTG TCTCGTTATAGGTTCCTCC
Genomic sequence	ATATTGCAACGTTGTTAGCAAGGCCCGTAGGTTGCCTTCTTTGCCAGCAGCCCACCTCTTTATC TCAAAATCAAGTGATTCACCAATTCTCTGAAAAAAAGAAACCACATTACCTCAAAAAATCAAAC TATCTAATTCATTTATCTACTTAAAGTCCAGAATCAGTATGATAAGATACAGAGCTTACATGTC GCTCTTCTTGCTCCTGCTGAGCTTGCAAGTCACGCTCATTCTTCTCAGCAAGAGCTTTTGCCTG AAAAATATCATATGAACAGATAGTTACTTTTATAATTACTAAACGACAGGTAGTTGCAGATTGA TTATAGGTTAGCATACCGCACGCTCCATTGTTCTTTGGTGTCGTTCCAATCTTGCCTTCCTTCT CTCTTCACTCTCTCCATCCACTTCTTGAAATACAGCAGATGGTAAAGGTGCTATATATGAAAAA TATAAAACGAGGTTAGTGCTTCATATACTCAAAGTGTGCTAAGGTAGTCCTTCTGTACTAAAAA ACATTAATTTTAAACGCTGTAGGGTGACTGAGTCATGACCACTCCTATCTCCACAACTAGCATC ATTGGTTGGCATCTTTAATCAACATGTGCTATAATTGATTTGTGCAAATTAGTTCCTAATATAG CTCAGAAAAAACTGCTAATAATAGTAAATGTTCAAATATTAAATAGTACCTCCAAATATAGAAG ATAGGCCATCCATAAGATTGCTTGATGAAGGCTGAGTAAAGGGAAAACCTGAACCAGAAGGTGT CCTCCTTACACCACCAGAACCAGCATTGCCAGGTTGAACATCGAAAGGATTCTGAAAAAAAATA GAAGCAGCAGAGAATCAAAGTTAAACAGAAAATTTTCATACAAAATAACTCATGCAGTTGTTCA GTTCTCACCGTTGTTGTGTTGTTGTATGATCTCGGTAGACTACTTGATCGAGAAGGCATGCCAA AGAATGACTCAAGGTCAGGTTCTGTTGTTGCTCTCCTTTGCTGATTTTCTCTTGCCAGTGCTTC AGCTGCAGCTGCAGCGGCAGCCCTTTCTCTAGCATCATTAAAAGCCCTTTGCTTAACTTCAGTA GCAACCCTCTCGAAAGCTGCTCTTTCAGCCCTCCACCGTGCTTCTGCTGCAGCTTTCTCAACAG CAGCTCGCTCAGCCTTTGCCCGAGCTTCTGCAGTAGCTTTCTCCTGAAATTCTGCTGTTTCCTT TTCCCTAGCTTCAGCAGCAGCCCTAGCAGCTCTTTCCCTTGCATCTGCGGCAACTTTGGCATCC CTTTCCCTTGATTCTGTTGCAGCCCTTTCTCTAGCCTCTGCTGCTTCTCTTTCCTTAGCTTCTG CAGCAGCCTTCGCAGCTCTTTCCTTTGCCTCCACTGCAGCTCTCTCACGAGCTTCTGTTGCTGC TTTCCATACTGCAGCTCGCTCTGCTCTTTGACGAGCCTCCTTCTCAGCTTGCATGCGTGCTTCA GCAGCTGATCTTTCGCGTGCCTCCCGTATAGCCTTATCTACAGCCTGCCTGGCCACTCTTTCTT TTTCACGCCTCCTCTGCTCCTCTTGTTCCCTTTGTCTCACATTTTCTCTTTCCCTCTCAAGCTC TTCTTCCATCTCCCTTTCTGCTCTTATTTGCTCTTCTTTATGTTCTCTTTGTATTTGTTCATTC TCTAATCTCTTTTCTTCATCTGTACTTTCTGTTTCATGAGCACATACCTCTGCTTTCTCATCTA TTTCTGGCTGTCGATATTGACTGCTAGTGAACATAGAATCAAATGCCCCTTGGTTCCCCCTTTT ACAGTGTCCCATCTCAGTCCAGTCCATGAAACTTGCAGTAGCTGCAGATGGATAATGCCCATTT CCTTCATGCTTTAGAACTTGTGGATGACCAATGGCAGAATTTGCAGGCTTTGTCAAGAAAAAAT CTTCCAATTCATCAATTTGGGATGTTTTAGAGGTGTTTGAAGAACATATGGAGTGATGGTAGCG TTGATTACAATGATGGGCATATGCTTCACTAGTTACAGATTCAGTAGGTGGTTTCTTAGCAGCA AGTGGAGGTGGAGGCCTTGAAGGAGGTGGCGCACTTGTAGGTAGTGTCACTAAAGCAATATCTA AAACAGTTAGCCACACATCATTAGTCGTTTGTGAAGATTGATTCACCTCTAACAAATCGTCTTC CTCAACAAATGGGTTCAATGTCTGAAAACTAGTGGTAACAGGTACTTCATGGACAACAGATGCT TCAGGGAAGTTCATCTCAGTCAATGTATTGGCAGGTGCTTCTGTTGATGCTTGTTGGACTGTCT TCTCCTGAGGCAGCCGATCGGAGTGACTCGTGCTGATTATGTTTTCAGTATATCTCCTTTCAGT TCTATCACTCTGGTTTTCAGATGTAAACGAAAAGGGTGGCATGGCTTTTGGAAACTCAGTAAAG ATATCAGAACCCTGAAATATCCCACTGGTATTATCAGGCGTTGTGTCCGCTTCCTTTCTAGGCA TGCCAATGTTATTCAGAAGATTTGAAAACAACCCTAAAGATGAATATCCCGATTTGTGTGTACC ACCTAAAGTAACGAAAGGATCTTCTGGCATGCTCATGCTAATTTTGCTAGAGGAAATTGATTCA CTTTCTTGTCTCGTTATAGGTTCCTCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.146163213

Conservation Information
Conserved circRNAs	NA
PMCS	0.146163213

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							66303472-66300990(+)
66303573-66303599(-)
66300979-66303599(-)
						
					

						Potential amino acid sequence
						
							MPMLFRRFENNPKDEYPDLCVPPKVTKGSSGMLMLILLEEIDSLSCLVIGSSILQRC*(+)
MSMPEDPFVTLGGTHKSGYSSLGLFSNLLNNIGMPRKEADTTPDNTSGIFQGSDIFTEFPKAMP
PFSFTSENQSDRTERRYTENIISTSHSDRLPQEKTVQQASTEAPANTLTEMNFPEASVVHEVPV
TTSFQTLNPFVEEDDLLEVNQSSQTTNDVWLTVLDIALVTLPTSAPPPSRPPPPLAAKKPPTES
VTSEAYAHHCNQRYHHSICSSNTSKTSQIDELEDFFLTKPANSAIGHPQVLKHEGNGHYPSAAT
ASFMDWTEMGHCKRGNQGAFDSMFTSSQYRQPEIDEKAEVCAHETESTDEEKRLENEQIQREHK
EEQIRAEREMEEELERERENVRQREQEEQRRREKERVARQAVDKAIREARERSAAEARMQAEKE
ARQRAERAAVWKAATEARERAAVEAKERAAKAAAEAKEREAAEARERAATESRERDAKVAADAR
ERAARAAAEAREKETAEFQEKATAEARAKAERAAVEKAAAEARWRAERAAFERVATEVKQRAFN
DARERAAAAAAAEALARENQQRRATTEPDLESFFGMPSRSSSLPRSYNNTTTNPFDVQPGNAGS
GGVRRTPSGSGFPFTQPSSSNLMDGLSSIFGAPLPSAVFQEVDGESEERRKARLERHQRTMERA
AKALAEKNERDLQAQQEQEERHRIGESLDFEIKRWAAGKEGNLRALLTTLQYGGTYNETRK*(-
)
MEEPITRQESESISSSKISMSMPEDPFVTLGGTHKSGYSSLGLFSNLLNNIGMPRKEADTTPDN
TSGIFQGSDIFTEFPKAMPPFSFTSENQSDRTERRYTENIISTSHSDRLPQEKTVQQASTEAPA
NTLTEMNFPEASVVHEVPVTTSFQTLNPFVEEDDLLEVNQSSQTTNDVWLTVLDIALVTLPTSA
PPPSRPPPPLAAKKPPTESVTSEAYAHHCNQRYHHSICSSNTSKTSQIDELEDFFLTKPANSAI
GHPQVLKHEGNGHYPSAATASFMDWTEMGHCKRGNQGAFDSMFTSSQYRQPEIDEKAEVCAHET
ESTDEEKRLENEQIQREHKEEQIRAEREMEEELERERENVRQREQEEQRRREKERVARQAVDKA
IREARERSAAEARMQAEKEARQRAERAAVWKAATEARERAAVEAKERAAKAAAEAKEREAAEAR
ERAATESRERDAKVAADARERAARAAAEAREKETAEFQEKATAEARAKAERAAVEKAAAEARWR
AERAAFERVATEVKQRAFNDARERAAAAAAAEALARENQQRRATTEPDLESFFGMPSRSSSLPR
SYNNTTTNPFDVQPGNAGSGGVRRTPSGSGFPFTQPSSSNLMDGLSSIFGAPLPSAVFQEVDGE
SEERRKARLERHQRTMERAAKALAEKNERDLQAQQEQEERHRIGESLDFEIKRWAAGKEGNLRA
LLTTLQYGGTYNETRK*(-)
						
					

						Sponge-miRNAs
						
							zma-miR444a 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	66303472-66300990(+) 66303573-66303599(-) 66300979-66303599(-)
Potential amino acid sequence	MPMLFRRFENNPKDEYPDLCVPPKVTKGSSGMLMLILLEEIDSLSCLVIGSSILQRC(+) MSMPEDPFVTLGGTHKSGYSSLGLFSNLLNNIGMPRKEADTTPDNTSGIFQGSDIFTEFPKAMP PFSFTSENQSDRTERRYTENIISTSHSDRLPQEKTVQQASTEAPANTLTEMNFPEASVVHEVPV TTSFQTLNPFVEEDDLLEVNQSSQTTNDVWLTVLDIALVTLPTSAPPPSRPPPPLAAKKPPTES VTSEAYAHHCNQRYHHSICSSNTSKTSQIDELEDFFLTKPANSAIGHPQVLKHEGNGHYPSAAT ASFMDWTEMGHCKRGNQGAFDSMFTSSQYRQPEIDEKAEVCAHETESTDEEKRLENEQIQREHK EEQIRAEREMEEELERERENVRQREQEEQRRREKERVARQAVDKAIREARERSAAEARMQAEKE ARQRAERAAVWKAATEARERAAVEAKERAAKAAAEAKEREAAEARERAATESRERDAKVAADAR ERAARAAAEAREKETAEFQEKATAEARAKAERAAVEKAAAEARWRAERAAFERVATEVKQRAFN DARERAAAAAAAEALARENQQRRATTEPDLESFFGMPSRSSSLPRSYNNTTTNPFDVQPGNAGS GGVRRTPSGSGFPFTQPSSSNLMDGLSSIFGAPLPSAVFQEVDGESEERRKARLERHQRTMERA AKALAEKNERDLQAQQEQEERHRIGESLDFEIKRWAAGKEGNLRALLTTLQYGGTYNETRK(- ) MEEPITRQESESISSSKISMSMPEDPFVTLGGTHKSGYSSLGLFSNLLNNIGMPRKEADTTPDN TSGIFQGSDIFTEFPKAMPPFSFTSENQSDRTERRYTENIISTSHSDRLPQEKTVQQASTEAPA NTLTEMNFPEASVVHEVPVTTSFQTLNPFVEEDDLLEVNQSSQTTNDVWLTVLDIALVTLPTSA PPPSRPPPPLAAKKPPTESVTSEAYAHHCNQRYHHSICSSNTSKTSQIDELEDFFLTKPANSAI GHPQVLKHEGNGHYPSAATASFMDWTEMGHCKRGNQGAFDSMFTSSQYRQPEIDEKAEVCAHET ESTDEEKRLENEQIQREHKEEQIRAEREMEEELERERENVRQREQEEQRRREKERVARQAVDKA IREARERSAAEARMQAEKEARQRAERAAVWKAATEARERAAVEAKERAAKAAAEAKEREAAEAR ERAATESRERDAKVAADARERAARAAAEAREKETAEFQEKATAEARAKAERAAVEKAAAEARWR AERAAFERVATEVKQRAFNDARERAAAAAAAEALARENQQRRATTEPDLESFFGMPSRSSSLPR SYNNTTTNPFDVQPGNAGSGGVRRTPSGSGFPFTQPSSSNLMDGLSSIFGAPLPSAVFQEVDGE SEERRKARLERHQRTMERAAKALAEKNERDLQAQQEQEERHRIGESLDFEIKRWAAGKEGNLRA LLTTLQYGGTYNETRK*(-)
Sponge-miRNAs	zma-miR444a
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b

circRNA

Detail information of Zm00001d040795_circ_g.1

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