Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os11g0163100_circ_g.10 |
ID in PlantcircBase | osa_circ_008539 |
Alias | Os_ciR2580 |
Organism | Oryza sativa |
Position | chr11: 3080515-3080631 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Os11g0163100 |
Parent gene annotation |
Similar to Actin 7 (Actin 2). (Os11t0163100-01) |
Parent gene strand | + |
Alternative splicing | Os11g0163100_circ_g.6 Os11g0163100_circ_g.7 Os11g0163100_circ_g.8 Os11g0163100_circ_g.9 |
Support reads | 6 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Os11t0163100-01:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.853260185 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |