Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d018413_circ_g.1 |
ID in PlantcircBase | zma_circ_002171 |
Alias | circ2202 |
Organism | Zea mays |
Position | chr5: 220273396-220273776 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d018413 |
Parent gene annotation |
Molecular chaperone Hsp40/DnaJ family protein |
Parent gene strand | - |
Alternative splicing | Zm00001d018412_circ_ag.1 Zm00001d018412_circ_ag.2 Zm00001d018412_circ_ag.3 Zm00001d018412_circ_ag.4 Zm00001d018413_circ_g.2 |
Support reads | 28 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d018413_T018:2 Zm00001d018413_T016:2 Zm00001d018413_T005:2 Zm00001d018413_T017:2 Zm00001d018413_T015:2 Zm00001d018413_T019:2 Zm00001d018413_T004:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.137673469 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |