Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d035001_circ_g.1 |
ID in PlantcircBase | zma_circ_005136 |
Alias | stemdr_test_circ_000114 |
Organism | Zea mays |
Position | chr6: 1392092-1392281 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d035001 |
Parent gene annotation |
ferredoxin1 |
Parent gene strand | - |
Alternative splicing | Zm00001d035002_circ_igg.1 Zm00001d035001_circ_ag.1 Zm00001d035001_circ_ag.2 Zm00001d035001_circ_ag.3 Zm00001d035001_circ_ag.4 Zm00001d035001_circ_ag.5 Zm00001d035001_circ_ag.6 |
Support reads | NA |
Tissues | stem |
Exon boundary | No-No |
Splicing signals | GT-GA |
Number of exons covered | Zm00001d035001_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.116585445 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |