Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d023559_circ_g.10 |
ID in PlantcircBase | zma_circ_000085 |
Alias | NA |
Organism | Zea mays |
Position | chr10: 10216630-10216817 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Zm00001d023559 |
Parent gene annotation |
Fructose-bisphosphate aldolase |
Parent gene strand | - |
Alternative splicing | Zm00001d023559_circ_g.5 Zm00001d023559_circ_g.6 Zm00001d023559_circ_g.7 Zm00001d023559_circ_g.8 Zm00001d023559_circ_g.9 |
Support reads | 2 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d023559_T001:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.07358156 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Lu et al., 2015 |