Detail information of AT2G26100_circ_g.2


General Information
CircRNA Name AT2G26100_circ_g.2
ID in PlantcircBase ath_circ_014891
Alias NA
Organism Arabidpsis thaliana
Position chr2: 11118027-11118156  JBrowse»
Reference genome TAIR10.38
Type   ue-circRNA
Identification method circRNA_finder
Parent gene AT2G26100
Parent gene annotation Hexosyltransferase
Parent gene strand -
Alternative splicing NA
Support reads 2
Tissues inflorescences
Exon boundary   No-No
Splicing signals   GT-AG
Number of exons covered AT2G26100.1:1
AT2G26100.2:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GAAGATGCGGTGGTGAAGCGGTGGGAGAATAGTGGCATTATCGTAAATCTGAGGTTGGTCTAAG
Gaagagtttggtttatgggttttcgaagagggtttattgtagtaagaaggagacgccggggaag
aa
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence AAGAGTTTGGTTTATGGGTTTTCGAAGAGGGTTTATTGTAGTAAGAAGGAGACGCCGGGGAAGA
AGAAGATGCGGTGGTGAAGCGGTGGGAGAATAGTGGCATTATCGTAAATCTGAGGTTGGTCTAA
GG
Conservation Information
Conserved circRNAs NA
PMCS 0.182689355
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017