Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d023311_circ_g.3 |
ID in PlantcircBase | zma_circ_010138 |
Alias | zma_circ_0000131 |
Organism | Zea mays |
Position | chr10: 2752103-2752384 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d023311 |
Parent gene annotation |
Os01g0112866 protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d023311_T009:1 Zm00001d023311_T013:1 Zm00001d023311_T035:1 Zm00001d023311_T001:1 Zm00001d023311_T016:1 Zm00001d023311_T025:1 Zm00001d023311_T027:1 Zm00001d023311_T007:1 Zm00001d023311_T021:1 Zm00001d023311_T002:1 Zm00001d023311_T034:1 Zm00001d023311_T026:1 Zm00001d023311_T005:1 Zm00001d023311_T029:1 Zm00001d023311_T030:1 Zm00001d023311_T037:1 Zm00001d023311_T041:1 Zm00001d023311_T040:1 Zm00001d023311_T010:1 Zm00001d023311_T032:1 Zm00001d023311_T022:1 Zm00001d023311_T033:1 Zm00001d023311_T023:1 Zm00001d023311_T015:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.166467738 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
2752187-2752365(-) 2752153-2752289(-) |
Potential amino acid sequence |
MRYSQAYIEFSYASLNSSASNVSSRMQIIREIQV*(-) MPVSIPLPAMSPVGCKSSERFRSREDREGSVVHLLDFLQPQATHFQLR*(-) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |