Splice junction sequence |
GCAGACAAGTGCTTCTTTGAAGTTCACTGTTTTGAATCCTAAAGGCCGCATTTGGACGATGGTA GCTGGAGGTGGTGCTAGCGTCATATATGCTGATACAgtgacagaatctacggatttcactgagt taaccaaccaggagtcatggctatcgtccacaaagctagttgtgaaaccggatatgctatttgg gaaacgcg
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 765 Transcript exons: 3042490-3042666,3042743-3042904,3043016-3043096,3043367- 3043418,3043516-3043630,3043722-3043803,3043923-3044018 GTGACAGAATCTACGGATTTCACTGAGTTAACCAACCAGGAGTCATGGCTATCGTCCACAAAGC TAGTTGTGAAACCGGATATGCTATTTGGGAAACGCGGGAAAAGTGGTTTGGTAGCTCTAAAGCT GGATCTTGCTGAAGTTGCAGACTTTGTCAAAGCCCGCCTCGGCACTGAGGTCGAGATGGAGGGA TGTAAAGCACCTATCACTACATTCATTGTGGAGCCTTTTGTGCCTCATGATCAAGAATACTACC TCTCTATAGTATCTGATAGACTTGGATGCACTATAAGCTTCTCTGAATGTGGTGGCATTGAAAT AGAAGAGAATTGGGACAAAGTGAAGACTATATTTCTTCCTGCGGAAAAGTCGATGACGCTAGAA GTATGTGCTCCATTAATAGCAACTCTTCCTCTTGAGGTTCGAGCTAAAATCGGCAACTTCATAA TGGGTGCCTTTGCTGTATTTCAAGATTTGGATTTCAGTTTTATGGAGATGAATCCTTTTACACT AGTCGATGGAGAACCATTCCCTCTGGATATGAGAGGAGAATTAGATGACACTGCTGCCTTCAAG AATTTCAACAAGTGGGGAGACATTGAATTTCCTCTGCCATTTGGAAGGGTCCTCAGTTCTACAG AGAACTTCATCCATGGTTTAGATGAGAAGACAAGTGCTTCTTTGAAGTTCACTGTTTTGAATCC TAAAGGCCGCATTTGGACGATGGTAGCTGGAGGTGGTGCTAGCGTCATATATGCTGATACA
|
Genomic sequence |
GTGACAGAATCTACGGATTTCACTGAGTTAACCAACCAGGAGTCATGGCTATCGTCCACAAAGC TAGTTGTGAAACCGGATATGCTATTTGGGAAACGCGGGAAAAGTGGTTTGGTAGCTCTAAAGCT GGATCTTGCTGAAGTTGCAGACTTTGTCAAAGCCCGCCTCGGCACTGAGGTGACTCATCGCAGC CAGAGTTATAGATCAGCTGGTAAATTTTGTTGTGGTATTGATGTTTGTTTATGAGTCGCAGGTC GAGATGGAGGGATGTAAAGCACCTATCACTACATTCATTGTGGAGCCTTTTGTGCCTCATGATC AAGAATACTACCTCTCTATAGTATCTGATAGACTTGGATGCACTATAAGCTTCTCTGAATGTGG TGGCATTGAAATAGAAGAGAATTGGGACAAAGTACTACCTTTTTTTTTTTTTTTGTGCTTCTTT TCTTGTTTTGTTGCATTATCTTTTTCGACTCACTTCTGTTGTTTTCTCCTGGGGAACTTGGTTT TCTGGTATCAACAGGTGAAGACTATATTTCTTCCTGCGGAAAAGTCGATGACGCTAGAAGTATG TGCTCCATTAATAGCAACTCTTCCTCTTGAGGTAAGTTTCTGTTCCCCTGTGATTAACTTCCTA GTAAGCCAGCGGCACCCTGCAACTATTTGCTTTAGATAACCCTAGAAATCTGGTTTTGATGTGC GTACATTTTCGGTCTTTGTATGGTGTTCTACTTTCAATCCTATGCAAATTCAAAGATCTGTTAG TCTGAACTTAGGCTGCTCAGTACTTGCATTCTTTTTTAAGGAGATTAATAATTTAGGTTGTTTT GAACTATGCTATGCCTGCTCTAACAAATGCTTCTATCTATTTCAGGTTCGAGCTAAAATCGGCA ACTTCATAATGGGTGCCTTTGCTGTATTTCAAGGTATGAGTATATTAGATTAGGCCACTTCTTG ACTTTGCTCTGATTCGAGATCTCTCAAGGACATCTTCTTATTATCTACTTGTGTGTTTCTTTAA AGATTTGGATTTCAGTTTTATGGAGATGAATCCTTTTACACTAGTCGATGGAGAACCATTCCCT CTGGATATGAGAGGAGAATTAGATGACACTGCTGCCTTCAAGAATTTCAACAAGTATGTCTAAC ATTTCTAAGTTCCCGGTGAGAGACCCGCAATCAATTTTTCCGGTGGAAACTCATTGGATTGATA AGTTTTATTAATACAGGTGGGGAGACATTGAATTTCCTCTGCCATTTGGAAGGGTCCTCAGTTC TACAGAGAACTTCATCCATGGTTTAGATGAGAAGGTTTAAGCATCCAGCTTTTCTAAAAACACC ACTTTTGTGACTCAGACAGGAAAGACTTGAAAGTAATGTTACTGACCATTCATGTCTGTGTGTG TGTGTGTGTTTGTTACTTATTGCAGACAAGTGCTTCTTTGAAGTTCACTGTTTTGAATCCTAAA GGCCGCATTTGGACGATGGTAGCTGGAGGTGGTGCTAGCGTCATATATGCTGATACA |