Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G20080_circ_g.1 |
ID in PlantcircBase | ath_circ_003498 |
Alias | 1:6964127-6964920 |
Organism | Arabidpsis thaliana |
Position | chr1: 6964127-6964920 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G20080 |
Parent gene annotation |
Synaptotagmin-2 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | flower |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G20080.2:3 AT1G20080.1:3 AT1G20080.5:3 AT1G20080.3:3 AT1G20080.4:3 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.217719075 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |