Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038689_circ_g.3 |
ID in PlantcircBase | zma_circ_005318 |
Alias | leafctrl_test_circ_002229 |
Organism | Zea mays |
Position | chr6: 162609346-162610148 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d038689 |
Parent gene annotation |
Proline iminopeptidase |
Parent gene strand | - |
Alternative splicing | Zm00001d038689_circ_g.1 Zm00001d038689_circ_g.2 |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-Yes |
Splicing signals | CT-AA |
Number of exons covered | Zm00001d038689_T004:4 Zm00001d038689_T003:4 Zm00001d038689_T001:4 Zm00001d038689_T002:3 Zm00001d038689_T005:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.318565546 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | zma-miR156j-3p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |