Plant Circular RNA Database

Detail information of Zm00001d017609_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d017609_circ_g.2
					
						ID in PlantcircBase
						zma_circ_008780
					
						Alias
						zma_circ_0001978, GRMZM5G833032_C2
					
						Organism
						
							Zea mays						
					
						Position
						
							chr5: 201464214-201466879  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						find_circ, CIRI2
					
						Parent gene
						
							Zm00001d017609						
					
						Parent gene annotation
						
							Protein REVEILLE 6
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Zm00001d017609_circ_g.1 Zm00001d017609_circ_g.3 Zm00001d017609_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d017609_T013:2
Zm00001d017609_T007:3
Zm00001d017609_T015:4
Zm00001d017609_T018:4
Zm00001d017609_T010:4
Zm00001d017609_T016:5
Zm00001d017609_T012:5
Zm00001d017609_T001:4
Zm00001d017609_T005:3
Zm00001d017609_T017:4
Zm00001d017609_T003:6
Zm00001d017609_T014:4
Zm00001d017609_T002:4
Zm00001d017609_T006:4
Zm00001d017609_T019:5
Zm00001d017609_T020:2
Zm00001d017609_T011:5
Zm00001d017609_T004:5
Zm00001d017609_T008:4

General Information
CircRNA Name	Zm00001d017609_circ_g.2
ID in PlantcircBase	zma_circ_008780
Alias	zma_circ_0001978, GRMZM5G833032_C2
Organism	Zea mays
Position	chr5: 201464214-201466879 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	find_circ, CIRI2
Parent gene	Zm00001d017609
Parent gene annotation	Protein REVEILLE 6
Parent gene strand	-
Alternative splicing	Zm00001d017609_circ_g.1 Zm00001d017609_circ_g.3 Zm00001d017609_circ_g.4
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d017609_T013:2 Zm00001d017609_T007:3 Zm00001d017609_T015:4 Zm00001d017609_T018:4 Zm00001d017609_T010:4 Zm00001d017609_T016:5 Zm00001d017609_T012:5 Zm00001d017609_T001:4 Zm00001d017609_T005:3 Zm00001d017609_T017:4 Zm00001d017609_T003:6 Zm00001d017609_T014:4 Zm00001d017609_T002:4 Zm00001d017609_T006:4 Zm00001d017609_T019:5 Zm00001d017609_T020:2 Zm00001d017609_T011:5 Zm00001d017609_T004:5 Zm00001d017609_T008:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCTTTCACCATTGATGAAGCAACAGCTTGTGGGATGGAACTATGAGCCCATGAAGAAACAGGCA
CGTTCATGCCAGAGTTCCTATGGATGGAAGATGAATacaatcgtcagccgaaggcatggagcta
gcgagaagcacaaaaggtgcaaacgcctccttcatcactcatcggtgctactacgccagggcag
gcactatc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2169
Transcript exons: 201464214-201464362,201464450-201465756,201466094-201466
707,201466781-201466879
ACAATCGTCAGCCGAAGGCATGGAGCTAGCGAGAAGCACAAAAGGTGCAAACGCCTCCTTCATC
ACTCATCGGTGCTACTACGCCAGGGCAGGCACTATCCTCCTGAGGTCTGTCGAACTGAAATTAT
ATGCCGAGAGACCTGGCCACACTTACATGAAAGGCGCGCTCGTCGCTAGAGCTGAACTTCTTGA
GCTCCCTAGCCCAGGTCCATCAGAAGCGCTGTATAAGGACAACAACTTCCTCTGTGTCAAAATG
CATAGAGCACAATTCAGTTCCTTTTTTTTACGATTGAGAATAAGAGAAATTGCATCCTGATTAG
ATGATCCAACTATACTGCACGTGCATGCCTAGTTTAGTATACAAATAGTTTCCCAGTGCTGAGG
CACTTGGCTAACCTGGCGTACTTTACAGACTAGTTTTTCACTGAAGAGTGAAGACTAACGTTCG
GAAGATTAATCTGTGTAACCTGATAAACTGACCACAGATTAATCTTGTGTTTTGTCCCTTAATA
CAATGTGGAGGGATGAAAACGGTCGGAAACGGTATTTATTCGGTAATCAGTTTTTAGTCGTTTT
TCTTTGGTTGCGAATAAATAGGATATAGAATCTACAATACAAAATTGCATTCTTGTTTTTAACA
TCCAGCTTGTAAAGATTCATAAAAGGTAAACCTAAAATTCATTCTATATTTTCTCAAATAATAT
ATATAAACTTCGGTATGGATTCGGAAACAAATTCGGTAATTTTTTTAACGTTTTGTGTTGTAGG
GAGCAAATAATACATAAAACAATTTATGTAATATTTTATTCATATTTGTACTAATGTGCTTGAT
AACATAAGAAAAGATCAACATTAGATTTTATGCATATCTATTTTAAAATATTAAATTTGTTCTA
ACAGTTCGGATTACCACTTTCATCCCTTTGTGGGTGTCAGGAGATAAGAGTCTATGCTATAAGA
TAGTGGTTCGGACTTCAGGCCTGCTCTGCTGAGTACTGGCATCACGAATTGGCAAGACCTGCTT
AGAAGGACCAATTAAGATCATGAATGGTTCGAGAACGCAAACTACACAAAACACGTGTAGCTTC
TTTACATGCTGACCGAATGGGATTTTTCAAAGTGGCTACCCCCAACGTATACACACAGCAAAAA
TGGCATAACATCATGGATAACATAGTTCTGGATACTAATATTTTAAGGAAGGTAAAGGAAACCT
CTACAAGAGGACAAATACCATAGAGAAATGATGCAAACAGCAAAACACTGAAACATGAACCAGA
GTACCAGACACCTAAAGAAAACATTGCAATTACTAGTGGGTCGAAATACACAATCATCAATTAG
TGGCAAACAATTTAGTAGAGGCATAATCTGAGGGCATGTTTGAACTACTTACTTGATCTTCAAA
ATCAGGACTGGTTAAATTGATGGAGAGATTCCTCATCAACAACAGTGCCGTCTCAACGTCAATT
GGATTCATCTCCTTAAGTTTCTGCAGATGACCACTTGTACTTGGATCGAAAACACTACCTAAGA
AGCTGTACACTCCCGCAAAATCTGGCATAACTATATCAAACATTGGAAAGACATAATTGAAATG
TCAAGAATGTAAATATGAATTAGATAAGCTAGCAATTCATTCAAGACATAGATTCAATATTGAA
AACAGTAAAATATTTGAAAAAGAAACAGTACAAAGAAATGGATTGTGCTGTTTTGTGTTACACC
GTTTCTCTGTATGTTAAGCATCATCAAGAGAATATTGGAGGTTCGGTTCATTCTAAAAGAAGGG
GCCAGCGGATTTGAGATTGAAGCTTACAAATTCACAAGAAAAGATGCACAGGAGGATGGTTAAG
ACATAATTCTTAGAAATAGTAGAGATGGACAGAATCGGAGTAAGTATTTTGCACTACAAGATGA
TTATCAGAAATATCATGAGGTACTGACGGCGGAGTGACGGAATTTGATTTATTGGATCATTTGT
TTCACCAGGTTGCCAAGTTCTTGGAAGGCCTTCAGTACTACTTGAGCAAAAATTGTTTGAACCT
GGTGTTCCAGCACCTAAATCTTCTTTCACCATTGATGAAGCAACAGCTTGTGGGATGGAACTAT
GAGCCCATGAAGAAACAGGCACGTTCATGCCAGAGTTCCTATGGATGGAAGATGAAT
						
					

						Genomic sequence
						
							ACAATCGTCAGCCGAAGGCATGGAGCTAGCGAGAAGCACAAAAGGTGCAAACGCCTCCTTCATC
ACTCATCGGTGCTACTACGCCAGGGCAGGCACTATCCTCCTGAGGTCTGTCGAACTGAAATTAT
ATGCCGAGAGACCTGGCCACACTACTCGCCTTTAATCCTGGAGTAGTCATGAACTTGTCTGTAG
ATTGTGGGAACAAAAGAGGCGGCGGGACAGCGAGGAGGGCACACCTTACATGAAAGGCGCGCTC
GTCGCTAGAGCTGAACTTCTTGAGCTCCCTAGCCCAGGTCCATCAGAAGCGCTGTATAAGGACA
ACAACTTCCTCTGTGTCAAAATGCATAGAGCACAATTCAGTTCCTTTTTTTTACGATTGAGAAT
AAGAGAAATTGCATCCTGATTAGATGATCCAACTATACTGCACGTGCATGCCTAGTTTAGTATA
CAAATAGTTTCCCAGTGCTGAGGCACTTGGCTAACCTGGCGTACTTTACAGACTAGTTTTTCAC
TGAAGAGTGAAGACTAACGTTCGGAAGATTAATCTGTGTAACCTGATAAACTGACCACAGATTA
ATCTTGTGTTTTGTCCCTTAATACAATGTGGAGGGATGAAAACGGTCGGAAACGGTATTTATTC
GGTAATCAGTTTTTAGTCGTTTTTCTTTGGTTGCGAATAAATAGGATATAGAATCTACAATACA
AAATTGCATTCTTGTTTTTAACATCCAGCTTGTAAAGATTCATAAAAGGTAAACCTAAAATTCA
TTCTATATTTTCTCAAATAATATATATAAACTTCGGTATGGATTCGGAAACAAATTCGGTAATT
TTTTTAACGTTTTGTGTTGTAGGGAGCAAATAATACATAAAACAATTTATGTAATATTTTATTC
ATATTTGTACTAATGTGCTTGATAACATAAGAAAAGATCAACATTAGATTTTATGCATATCTAT
TTTAAAATATTAAATTTGTTCTAACAGTTCGGATTACCACTTTCATCCCTTTGTGGGTGTCAGG
AGATAAGAGTCTATGCTATAAGATAGTGGTTCGGACTTCAGGCCTGCTCTGCTGAGTACTGGCA
TCACGAATTGGCAAGACCTGCTTAGAAGGACCAATTAAGATCATGAATGGTTCGAGAACGCAAA
CTACACAAAACACGTGTAGCTTCTTTACATGCTGACCGAATGGGATTTTTCAAAGTGGCTACCC
CCAACGTATACACACAGCAAAAATGGCATAACATCATGGATAACATAGTTCTGGATACTAATAT
TTTAAGGAAGGTAAAGGAAACCTCTACAAGAGGACAAATACCATAGAGAAATGATGCAAACAGC
AAAACACTGAAACATGAACCAGAGTACCAGACACCTAAAGAAAACATTGCAATTACTAGTGGGT
CGAAATACACAATCATCAATTAGTGGCAAACAATTTAGTAGAGGCATAATCTGAGGGCATGTTT
GAACTACTTACTTGATCTTCAAAATCAGGACTGGTTAAATTGATGGAGAGATTCCTCATCAACA
ACAGTGCCTGATGATAAACAGACAGAGAGTTAACACAGGCAGAGTTCCGAACCATAACTCTGAG
GAAATGATGAATTCAGCGTGCCACCTATTGGTTTCAATACAGAATGAAAAATGATGACTATTCA
GTCACAATGCTTGAATGAGGAGAGCTTAACTACTACCAGGCATCATACATAATAAAGACTAGCA
TAAATTGTTTATGTTGTGTTGTTGTAACTATGAAATTGACAAAAGCCATTATTTTGGAGGACAA
ATGGTGCAAATGTTACTGCTGACTAGTTAGAACATGCTTATGATTATGAATAGAAAAGGGAAAT
AAGGCAAATCCATGACTGACATACCGTCTCAACGTCAATTGGATTCATCTCCTTAAGTTTCTGC
AGATGACCACTTGTACTTGGATCGAAAACACTACCTAAGAAGCTGTACACTCCCGCAAAATCTG
GCATAACTATATCAAACATTGGAAAGACATAATTGAAATGTCAAGAATGTAAATATGAATTAGA
TAAGCTAGCAATTCATTCAAGACATAGATTCAATATTGAAAACAGTAAAATATTTGAAAAAGAA
ACAGTACAAAGAAATGGATTGTGCTGTTTTGTGTTACACCGTTTCTCTGTATGTTAAGCATCAT
CAAGAGAATATTGGAGGTTCGGTTCATTCTAAAAGAAGGGGCCAGCGGATTTGAGATTGAAGCT
TACAAATTCACAAGAAAAGATGCACAGGAGGATGGTTAAGACATAATTCTTAGAAATAGTAGAG
ATGGACAGAATCGGAGTAAGTATTTTGCACTACAAGATGATTATCAGAAATATCATGAGGTACT
GACGGCGGAGTGACGGAATTTGATTTATTGGATCATTTGTTTCACCAGGTTGCCAAGTTCTTGG
AAGGCCTTCAGTACTACTTGAGCAAAAATTGTTTGAACCTGGTGTTCCAGCACCTAAATCTTCT
GGGTGAAAGATAAGAATTAACAGATGAATATTCCAATAAAACCTTTTGACAGAAGAAGCACAAA
TACAAACCTTTCACCATTGATGAAGCAACAGCTTGTGGGATGGAACTATGAGCCCATGAAGAAA
CAGGCACGTTCATGCCAGAGTTCCTATGGATGGAAGATGAAT
						
					

			
		

Sequences
Splice junction sequence	CCTTTCACCATTGATGAAGCAACAGCTTGTGGGATGGAACTATGAGCCCATGAAGAAACAGGCA CGTTCATGCCAGAGTTCCTATGGATGGAAGATGAATacaatcgtcagccgaaggcatggagcta gcgagaagcacaaaaggtgcaaacgcctccttcatcactcatcggtgctactacgccagggcag gcactatc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2169 Transcript exons: 201464214-201464362,201464450-201465756,201466094-201466 707,201466781-201466879 ACAATCGTCAGCCGAAGGCATGGAGCTAGCGAGAAGCACAAAAGGTGCAAACGCCTCCTTCATC ACTCATCGGTGCTACTACGCCAGGGCAGGCACTATCCTCCTGAGGTCTGTCGAACTGAAATTAT ATGCCGAGAGACCTGGCCACACTTACATGAAAGGCGCGCTCGTCGCTAGAGCTGAACTTCTTGA GCTCCCTAGCCCAGGTCCATCAGAAGCGCTGTATAAGGACAACAACTTCCTCTGTGTCAAAATG CATAGAGCACAATTCAGTTCCTTTTTTTTACGATTGAGAATAAGAGAAATTGCATCCTGATTAG ATGATCCAACTATACTGCACGTGCATGCCTAGTTTAGTATACAAATAGTTTCCCAGTGCTGAGG CACTTGGCTAACCTGGCGTACTTTACAGACTAGTTTTTCACTGAAGAGTGAAGACTAACGTTCG GAAGATTAATCTGTGTAACCTGATAAACTGACCACAGATTAATCTTGTGTTTTGTCCCTTAATA CAATGTGGAGGGATGAAAACGGTCGGAAACGGTATTTATTCGGTAATCAGTTTTTAGTCGTTTT TCTTTGGTTGCGAATAAATAGGATATAGAATCTACAATACAAAATTGCATTCTTGTTTTTAACA TCCAGCTTGTAAAGATTCATAAAAGGTAAACCTAAAATTCATTCTATATTTTCTCAAATAATAT ATATAAACTTCGGTATGGATTCGGAAACAAATTCGGTAATTTTTTTAACGTTTTGTGTTGTAGG GAGCAAATAATACATAAAACAATTTATGTAATATTTTATTCATATTTGTACTAATGTGCTTGAT AACATAAGAAAAGATCAACATTAGATTTTATGCATATCTATTTTAAAATATTAAATTTGTTCTA ACAGTTCGGATTACCACTTTCATCCCTTTGTGGGTGTCAGGAGATAAGAGTCTATGCTATAAGA TAGTGGTTCGGACTTCAGGCCTGCTCTGCTGAGTACTGGCATCACGAATTGGCAAGACCTGCTT AGAAGGACCAATTAAGATCATGAATGGTTCGAGAACGCAAACTACACAAAACACGTGTAGCTTC TTTACATGCTGACCGAATGGGATTTTTCAAAGTGGCTACCCCCAACGTATACACACAGCAAAAA TGGCATAACATCATGGATAACATAGTTCTGGATACTAATATTTTAAGGAAGGTAAAGGAAACCT CTACAAGAGGACAAATACCATAGAGAAATGATGCAAACAGCAAAACACTGAAACATGAACCAGA GTACCAGACACCTAAAGAAAACATTGCAATTACTAGTGGGTCGAAATACACAATCATCAATTAG TGGCAAACAATTTAGTAGAGGCATAATCTGAGGGCATGTTTGAACTACTTACTTGATCTTCAAA ATCAGGACTGGTTAAATTGATGGAGAGATTCCTCATCAACAACAGTGCCGTCTCAACGTCAATT GGATTCATCTCCTTAAGTTTCTGCAGATGACCACTTGTACTTGGATCGAAAACACTACCTAAGA AGCTGTACACTCCCGCAAAATCTGGCATAACTATATCAAACATTGGAAAGACATAATTGAAATG TCAAGAATGTAAATATGAATTAGATAAGCTAGCAATTCATTCAAGACATAGATTCAATATTGAA AACAGTAAAATATTTGAAAAAGAAACAGTACAAAGAAATGGATTGTGCTGTTTTGTGTTACACC GTTTCTCTGTATGTTAAGCATCATCAAGAGAATATTGGAGGTTCGGTTCATTCTAAAAGAAGGG GCCAGCGGATTTGAGATTGAAGCTTACAAATTCACAAGAAAAGATGCACAGGAGGATGGTTAAG ACATAATTCTTAGAAATAGTAGAGATGGACAGAATCGGAGTAAGTATTTTGCACTACAAGATGA TTATCAGAAATATCATGAGGTACTGACGGCGGAGTGACGGAATTTGATTTATTGGATCATTTGT TTCACCAGGTTGCCAAGTTCTTGGAAGGCCTTCAGTACTACTTGAGCAAAAATTGTTTGAACCT GGTGTTCCAGCACCTAAATCTTCTTTCACCATTGATGAAGCAACAGCTTGTGGGATGGAACTAT GAGCCCATGAAGAAACAGGCACGTTCATGCCAGAGTTCCTATGGATGGAAGATGAAT
Genomic sequence	ACAATCGTCAGCCGAAGGCATGGAGCTAGCGAGAAGCACAAAAGGTGCAAACGCCTCCTTCATC ACTCATCGGTGCTACTACGCCAGGGCAGGCACTATCCTCCTGAGGTCTGTCGAACTGAAATTAT ATGCCGAGAGACCTGGCCACACTACTCGCCTTTAATCCTGGAGTAGTCATGAACTTGTCTGTAG ATTGTGGGAACAAAAGAGGCGGCGGGACAGCGAGGAGGGCACACCTTACATGAAAGGCGCGCTC GTCGCTAGAGCTGAACTTCTTGAGCTCCCTAGCCCAGGTCCATCAGAAGCGCTGTATAAGGACA ACAACTTCCTCTGTGTCAAAATGCATAGAGCACAATTCAGTTCCTTTTTTTTACGATTGAGAAT AAGAGAAATTGCATCCTGATTAGATGATCCAACTATACTGCACGTGCATGCCTAGTTTAGTATA CAAATAGTTTCCCAGTGCTGAGGCACTTGGCTAACCTGGCGTACTTTACAGACTAGTTTTTCAC TGAAGAGTGAAGACTAACGTTCGGAAGATTAATCTGTGTAACCTGATAAACTGACCACAGATTA ATCTTGTGTTTTGTCCCTTAATACAATGTGGAGGGATGAAAACGGTCGGAAACGGTATTTATTC GGTAATCAGTTTTTAGTCGTTTTTCTTTGGTTGCGAATAAATAGGATATAGAATCTACAATACA AAATTGCATTCTTGTTTTTAACATCCAGCTTGTAAAGATTCATAAAAGGTAAACCTAAAATTCA TTCTATATTTTCTCAAATAATATATATAAACTTCGGTATGGATTCGGAAACAAATTCGGTAATT TTTTTAACGTTTTGTGTTGTAGGGAGCAAATAATACATAAAACAATTTATGTAATATTTTATTC ATATTTGTACTAATGTGCTTGATAACATAAGAAAAGATCAACATTAGATTTTATGCATATCTAT TTTAAAATATTAAATTTGTTCTAACAGTTCGGATTACCACTTTCATCCCTTTGTGGGTGTCAGG AGATAAGAGTCTATGCTATAAGATAGTGGTTCGGACTTCAGGCCTGCTCTGCTGAGTACTGGCA TCACGAATTGGCAAGACCTGCTTAGAAGGACCAATTAAGATCATGAATGGTTCGAGAACGCAAA CTACACAAAACACGTGTAGCTTCTTTACATGCTGACCGAATGGGATTTTTCAAAGTGGCTACCC CCAACGTATACACACAGCAAAAATGGCATAACATCATGGATAACATAGTTCTGGATACTAATAT TTTAAGGAAGGTAAAGGAAACCTCTACAAGAGGACAAATACCATAGAGAAATGATGCAAACAGC AAAACACTGAAACATGAACCAGAGTACCAGACACCTAAAGAAAACATTGCAATTACTAGTGGGT CGAAATACACAATCATCAATTAGTGGCAAACAATTTAGTAGAGGCATAATCTGAGGGCATGTTT GAACTACTTACTTGATCTTCAAAATCAGGACTGGTTAAATTGATGGAGAGATTCCTCATCAACA ACAGTGCCTGATGATAAACAGACAGAGAGTTAACACAGGCAGAGTTCCGAACCATAACTCTGAG GAAATGATGAATTCAGCGTGCCACCTATTGGTTTCAATACAGAATGAAAAATGATGACTATTCA GTCACAATGCTTGAATGAGGAGAGCTTAACTACTACCAGGCATCATACATAATAAAGACTAGCA TAAATTGTTTATGTTGTGTTGTTGTAACTATGAAATTGACAAAAGCCATTATTTTGGAGGACAA ATGGTGCAAATGTTACTGCTGACTAGTTAGAACATGCTTATGATTATGAATAGAAAAGGGAAAT AAGGCAAATCCATGACTGACATACCGTCTCAACGTCAATTGGATTCATCTCCTTAAGTTTCTGC AGATGACCACTTGTACTTGGATCGAAAACACTACCTAAGAAGCTGTACACTCCCGCAAAATCTG GCATAACTATATCAAACATTGGAAAGACATAATTGAAATGTCAAGAATGTAAATATGAATTAGA TAAGCTAGCAATTCATTCAAGACATAGATTCAATATTGAAAACAGTAAAATATTTGAAAAAGAA ACAGTACAAAGAAATGGATTGTGCTGTTTTGTGTTACACCGTTTCTCTGTATGTTAAGCATCAT CAAGAGAATATTGGAGGTTCGGTTCATTCTAAAAGAAGGGGCCAGCGGATTTGAGATTGAAGCT TACAAATTCACAAGAAAAGATGCACAGGAGGATGGTTAAGACATAATTCTTAGAAATAGTAGAG ATGGACAGAATCGGAGTAAGTATTTTGCACTACAAGATGATTATCAGAAATATCATGAGGTACT GACGGCGGAGTGACGGAATTTGATTTATTGGATCATTTGTTTCACCAGGTTGCCAAGTTCTTGG AAGGCCTTCAGTACTACTTGAGCAAAAATTGTTTGAACCTGGTGTTCCAGCACCTAAATCTTCT GGGTGAAAGATAAGAATTAACAGATGAATATTCCAATAAAACCTTTTGACAGAAGAAGCACAAA TACAAACCTTTCACCATTGATGAAGCAACAGCTTGTGGGATGGAACTATGAGCCCATGAAGAAA CAGGCACGTTCATGCCAGAGTTCCTATGGATGGAAGATGAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.098447961

Conservation Information
Conserved circRNAs	NA
PMCS	0.098447961

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							201466794-201464455(+)
201464278-201466849(-)
						
						Potential amino acid sequence
						
							MKQQLVGWNYEPMKKQARSCQSSYGWKMNTIVSRRHGASEKHKRCKRLLHHSSVLLRQGRHYPP
EVCRTEIICRET*(+)
MKEAFAPFVLLASSMPSADDCIHLPSIGTLA*(-)
						
						Sponge-miRNAs
						
							zma-miR171b-5p 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	201466794-201464455(+) 201464278-201466849(-)
Potential amino acid sequence	MKQQLVGWNYEPMKKQARSCQSSYGWKMNTIVSRRHGASEKHKRCKRLLHHSSVLLRQGRHYPP EVCRTEIICRET(+) MKEAFAPFVLLASSMPSADDCIHLPSIGTLA(-)
Sponge-miRNAs	zma-miR171b-5p
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d017609_circ_g.2

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