Plant Circular RNA Database

Detail information of Os05g0492500_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os05g0492500_circ_g.1
					
						ID in PlantcircBase
						osa_circ_028339
					
						Alias
						Os05circ14065/Os_ciR722
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr5: 24196810-24197542  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						SMALT, Segemehl, circRNA_finder, find_circ
					
						Parent gene
						
							Os05g0492500						
					
						Parent gene annotation
						
							Hypothetical protein. (Os05t0492500-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os05g0492500_circ_g.2 						
					
						Support reads
						33/47/2
					
						Tissues
						leaf and panicle/root/anther
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os05t0492500-01:2

General Information
CircRNA Name	Os05g0492500_circ_g.1
ID in PlantcircBase	osa_circ_028339
Alias	Os05circ14065/Os_ciR722
Organism	Oryza sativa
Position	chr5: 24196810-24197542 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	SMALT, Segemehl, circRNA_finder, find_circ
Parent gene	Os05g0492500
Parent gene annotation	Hypothetical protein. (Os05t0492500-01)
Parent gene strand	-
Alternative splicing	Os05g0492500_circ_g.2
Support reads	33/47/2
Tissues	leaf and panicle/root/anther
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os05t0492500-01:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: TATGAGATGGATGACCTGCTTG
 R: AAGTGACGAGTCAAGTCTGCAA
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: TATGAGATGGATGACCTGCTTG R: AAGTGACGAGTCAAGTCTGCAA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATC
CAACTATCACCATCTGAAGGTTAGAATCTGCTTCTGacatcagctgtcttacactgaagttgtg
gccaagttgcagcctgcagcagtgtcttttccttctaaaagtccaacatgctcctttcaccggc
ctaaccag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 169
Transcript exons: 24196810-24196895,24197460-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGC
CCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 189
Transcript exons: 24196810-24196917,24197462-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCTGAGCATGCTGCTGAAGTCC
TCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 210
Transcript exons: 24196810-24196888,24197412-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTG
ATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAA
GGTTAGAATCTGCTTCTG
Transcript length: 211
Transcript exons: 24196810-24196888,24197411-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTT
GATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGA
AGGTTAGAATCTGCTTCTG
Transcript length: 212
Transcript exons: 24196810-24196888,24197410-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCT
TGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTG
AAGGTTAGAATCTGCTTCTG
Transcript length: 225
Transcript exons: 24196810-24196891,24197400-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGA
TGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAA
CTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 225
Transcript exons: 24196810-24196924,24197433-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGGTCGCCTATGAGA
TGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAA
CTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 249
Transcript exons: 24196810-24196897,24197382-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCA
GGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCG
ATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 250
Transcript exons: 24196810-24196917,24197401-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCCGGCAAGAAGCTGGCTTTCC
AGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCC
GATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 255
Transcript exons: 24196810-24196918,24197397-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCACAGGCGGCAAGAAGCTGGC
TTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGT
CCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 259
Transcript exons: 24196810-24196897,24197372-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACTGCAGAGGAGCGGCAGCTGAAAGATCAGGCGGCAAGAAGC
TGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTG
AAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTT
CTG
Transcript length: 270
Transcript exons: 24196810-24196969,24197433-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG
GGTTCATCAAGCTTGACTCTTGACAACTTGTCGTCGCCTATGAGATGGATGACCTGCTTGATGA
GCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTT
AGAATCTGCTTCTG
Transcript length: 286
Transcript exons: 24196810-24196897,24197345-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACGTCGACAATTCTGGCTCACGTTGAAGATGCAGAGGAGCGG
CAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGG
ATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTA
TCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 295
Transcript exons: 24196810-24196961,24197400-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG
GGTTCATCAAGCTTGACTCTTGACGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCT
ATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCC
ATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 305
Transcript exons: 24196810-24196953,24197382-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG
GGTTCATCAAGCTTGACGGCAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAG
GACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAAC
TTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Transcript length: 322
Transcript exons: 24196810-24196891,24196894-24196994,24197404-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGGGG
TTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTTAACCAAGAAGCT
GGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGA
AGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTC
TG
Transcript length: 334
Transcript exons: 24196810-24196990,24197390-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG
GGTTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTGAAAGATCAGG
CGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGA
GCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTT
AGAATCTGCTTCTG
Transcript length: 619
Transcript exons: 24196810-24196993,24197108-24197542
ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG
GGTTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTTAACTGCTGTT
CCGATTCACATCCCGGCAGATTGTACACTAATTTTAGAGAAGAGGCATTGCTGCCCAGCTTTAT
ACTGAAAGCATAACAGATTGTACACTAATAGACTATGCCAATCGGAGAAGCTGTGCTGTCCGCG
TTCATGCAGGCGCTTTTCGAGAAAGCGGTGGCCGCTGCTTCCAGCGAGCTGAAATTCCCTCAAA
ACATAGCTGTGGAGCTGCAGAATCTATCAAGCAGTCTGTCGACAATTCTGGCTCACGTTGAAGA
TGCAGAGGAGCGGCAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTC
GCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAG
GCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
						
					

						Genomic sequence
						
							ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT
AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG
GGTTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTTAACTGCATAA
ACCATGTAGAGTTGAATCAGTTTTTGATAGTATCCACTGGTAGCAACACAAAGTCTTCGGGTCA
ATACTAGAGATATAACCAAGTTGAGTCCCCCAGCATCCTCACCTGCTGTTCCGATTCACATCCC
GGCAGATTGTACACTAATTTTAGAGAAGAGGCATTGCTGCCCAGCTTTATACTGAAAGCATAAC
AGATTGTACACTAATAGACTATGCCAATCGGAGAAGCTGTGCTGTCCGCGTTCATGCAGGCGCT
TTTCGAGAAAGCGGTGGCCGCTGCTTCCAGCGAGCTGAAATTCCCTCAAAACATAGCTGTGGAG
CTGCAGAATCTATCAAGCAGTCTGTCGACAATTCTGGCTCACGTTGAAGATGCAGAGGAGCGGC
AGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGA
TGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTAT
CACCATCTGAAGGTTAGAATCTGCTTCTG
						
					

			
		

Sequences
Splice junction sequence	AGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATC CAACTATCACCATCTGAAGGTTAGAATCTGCTTCTGacatcagctgtcttacactgaagttgtg gccaagttgcagcctgcagcagtgtcttttccttctaaaagtccaacatgctcctttcaccggc ctaaccag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 169 Transcript exons: 24196810-24196895,24197460-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGC CCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 189 Transcript exons: 24196810-24196917,24197462-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCTGAGCATGCTGCTGAAGTCC TCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 210 Transcript exons: 24196810-24196888,24197412-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTG ATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAA GGTTAGAATCTGCTTCTG Transcript length: 211 Transcript exons: 24196810-24196888,24197411-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTT GATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGA AGGTTAGAATCTGCTTCTG Transcript length: 212 Transcript exons: 24196810-24196888,24197410-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCT TGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTG AAGGTTAGAATCTGCTTCTG Transcript length: 225 Transcript exons: 24196810-24196891,24197400-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGA TGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAA CTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 225 Transcript exons: 24196810-24196924,24197433-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGGTCGCCTATGAGA TGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAA CTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 249 Transcript exons: 24196810-24196897,24197382-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCA GGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCG ATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 250 Transcript exons: 24196810-24196917,24197401-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCCGGCAAGAAGCTGGCTTTCC AGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCC GATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 255 Transcript exons: 24196810-24196918,24197397-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCACAGGCGGCAAGAAGCTGGC TTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGT CCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 259 Transcript exons: 24196810-24196897,24197372-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACTGCAGAGGAGCGGCAGCTGAAAGATCAGGCGGCAAGAAGC TGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTG AAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTT CTG Transcript length: 270 Transcript exons: 24196810-24196969,24197433-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG GGTTCATCAAGCTTGACTCTTGACAACTTGTCGTCGCCTATGAGATGGATGACCTGCTTGATGA GCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTT AGAATCTGCTTCTG Transcript length: 286 Transcript exons: 24196810-24196897,24197345-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACGTCGACAATTCTGGCTCACGTTGAAGATGCAGAGGAGCGG CAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGG ATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTA TCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 295 Transcript exons: 24196810-24196961,24197400-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG GGTTCATCAAGCTTGACTCTTGACGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCT ATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCC ATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 305 Transcript exons: 24196810-24196953,24197382-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG GGTTCATCAAGCTTGACGGCAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAG GACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAAC TTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG Transcript length: 322 Transcript exons: 24196810-24196891,24196894-24196994,24197404-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGGGG TTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTTAACCAAGAAGCT GGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGA AGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTC TG Transcript length: 334 Transcript exons: 24196810-24196990,24197390-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG GGTTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTGAAAGATCAGG CGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGATGACCTGCTTGATGA GCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTATCACCATCTGAAGGTT AGAATCTGCTTCTG Transcript length: 619 Transcript exons: 24196810-24196993,24197108-24197542 ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG GGTTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTTAACTGCTGTT CCGATTCACATCCCGGCAGATTGTACACTAATTTTAGAGAAGAGGCATTGCTGCCCAGCTTTAT ACTGAAAGCATAACAGATTGTACACTAATAGACTATGCCAATCGGAGAAGCTGTGCTGTCCGCG TTCATGCAGGCGCTTTTCGAGAAAGCGGTGGCCGCTGCTTCCAGCGAGCTGAAATTCCCTCAAA ACATAGCTGTGGAGCTGCAGAATCTATCAAGCAGTCTGTCGACAATTCTGGCTCACGTTGAAGA TGCAGAGGAGCGGCAGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTC GCCTATGAGATGGATGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAG GCCCATCCAACTATCACCATCTGAAGGTTAGAATCTGCTTCTG
Genomic sequence	ACATCAGCTGTCTTACACTGAAGTTGTGGCCAAGTTGCAGCCTGCAGCAGTGTCTTTTCCTTCT AAAAGTCCAACATGCTCCTTTCACCGGCCTAACCAGGAAATTGCAGACTTGACTCGTCACTTGG GGTTCATCAAGCTTGACTCTTGACAACTTGTCTCGTACTTTCCTGTGCTAATTTAACTGCATAA ACCATGTAGAGTTGAATCAGTTTTTGATAGTATCCACTGGTAGCAACACAAAGTCTTCGGGTCA ATACTAGAGATATAACCAAGTTGAGTCCCCCAGCATCCTCACCTGCTGTTCCGATTCACATCCC GGCAGATTGTACACTAATTTTAGAGAAGAGGCATTGCTGCCCAGCTTTATACTGAAAGCATAAC AGATTGTACACTAATAGACTATGCCAATCGGAGAAGCTGTGCTGTCCGCGTTCATGCAGGCGCT TTTCGAGAAAGCGGTGGCCGCTGCTTCCAGCGAGCTGAAATTCCCTCAAAACATAGCTGTGGAG CTGCAGAATCTATCAAGCAGTCTGTCGACAATTCTGGCTCACGTTGAAGATGCAGAGGAGCGGC AGCTGAAAGATCAGGCGGCAAGAAGCTGGCTTTCCAGGCTGAAGGACGTCGCCTATGAGATGGA TGACCTGCTTGATGAGCATGCTGCTGAAGTCCTCCGATCCAAACTTGCAGGCCCATCCAACTAT CACCATCTGAAGGTTAGAATCTGCTTCTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.61889759

Conservation Information
Conserved circRNAs	NA
PMCS	0.61889759

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							24196815-24197336(-)
						
						Potential amino acid sequence
						
							MSEADSNLQMVIVGWACKFGSEDFSSMLIKQVIHLIGDVLQPGKPASCRLIFQLPLLCIFNVSQ
NCRQTA*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	24196815-24197336(-)
Potential amino acid sequence	MSEADSNLQMVIVGWACKFGSEDFSSMLIKQVIHLIGDVLQPGKPASCRLIFQLPLLCIFNVSQ NCRQTA*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os05g0492500_circ_g.1

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