Plant Circular RNA Database

Detail information of Csa3G912290_circ_g.5

			
						 General Information
					
						CircRNA Name
						Csa3G912290_circ_g.5
					
						ID in PlantcircBase
						csa_circ_002245
					
						Alias
						Chr3:39460877_39465481
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr3: 39460877-39465481  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Find_circ
					
						Parent gene
						
							Csa3G912290						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa3G912290_circ_g.7 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa3G912290.1:6

General Information
CircRNA Name	Csa3G912290_circ_g.5
ID in PlantcircBase	csa_circ_002245
Alias	Chr3:39460877_39465481
Organism	Cucumis sativus
Position	chrChr3: 39460877-39465481 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	Find_circ
Parent gene	Csa3G912290
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa3G912290_circ_g.7
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa3G912290.1:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGATCCTTAGATCTCTATGCTTGTGATGATGATGAGGGAAAGCGTATGCAGCTTTTCATTTCA
ACAAAACCATGTCCCTATCAATCTGTACCAACCAAGgggatgctactggattcttttctgctcc
tttaacacagatagcacagatcttggaggatgaatttcatttgcatgatcacgtgaataggata
agcagtat

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GGGATGCTACTGGATTCTTTTCTGCTCCTTTAACACAGATAGCACAGATCTTGGAGGATGAATT
TCATTTGCATGATCACGTGAATAGGATAAGCAGTATTGAACTTGCTCCACCAGAATTGGTAATG
GGTCTTGTTCTTCCTGTATGATATGTAACCGTTTGGCTTCCATCTGAAAGTGTTACATTAATTG
TCAAATGCCAATATGTTACTATCACACTTCCTAATTTAAATTCTAAGAATTATATCACAGGGGA
AAACAGGCAAGTCCAGTGGAAGATTAAATTGTACTGTTCTTTTGTCGCCCAAACCAGAATTTGA
GAACATTAATCAATCTCAAAAGAGAGGAAGAAAATCTGGTTCTATTCAAATAAGTCCGACCAGG
ACTGGCCCTTGGACTACTGTTAGGTTAAACTATGCTACACCAGCTGCCTGTTGGCGCTTGGGGA
ATGATGTAATCGCCAGCCAAGTGACTGTCAAGGATAGCAGCCGATATGTGACAATAAGGTCTCT
CGTCTCAGTGCAGAACAATACTGATTTTATACTTGATGTATGCCTCATGTCCAAACATTACAAG
GAAGGCATACATCTCCTGAATGAAACTGGTAATTCTGATGGTTCAACCACCGAGAGTAACATGG
TTGTCATAGAAGAGTTCTATGAAACCGAAAAGTACATCCCCACTGCTGGCTGGGTTAGCTGCCT
GAAACTCAGTCAGGATTTTTCAGAAGGAATTATCCCGGAGGTAATAATCGTACTCTCTAAGAGA
GTAAAGATGAATTCAAATTATGATCATTTAGAGAAGTAAATGGTTAAAATCAAATGAAGAAAAA
CTTTTTTTTTCATATAATTTTATTAAAAAGAACTTCGTCTGTTACATGTTTGGTGGAATTCTAG
CTGGTCGTGTCCTTAAAACTTAGTATAATTTAATTACTCATATTAATATCTAGTGATGTTTATG
TTGTATTTTTCTTCTAAATTTCTTTGTCAGATCGCTTTGTTTATGCTTAATTGACATAAGGATG
AATCACTCTTCTATAATCTCTGGCCGTGGGAGGACTCAACCATTGTGCGACTGATAAAATTTGA
ATTTTATTAAATAATTCCTCTTTCTTACTTTAGAAGAACACAAAGGTCTATCTTGAATAGAAGG
ACCTAAAGCATAAACGTAAATAATCCTACCATTATAATTACATTCTAATTACAACTAATGTAAT
CCCCTCAAGTTGGTGTAAAGACTTCCGTTGACAACTTGTTTTGAAAAGGAAACCAAAGTTTTCA
TTGAGAAAATGAAAAGAGATTAATACTCAAAAGTACATTAACCTACAGGAAAAGAGAAACTAAG
AAAACAAAAGAAGCAATACCATTGAGGTACAAAGGAGAGAAGATATCAAAAAGCAAACACTTAA
GACCTAACAAACTAGACTAGCTCTAGAAAAGAAACCAAAGCTAGATAACACATAATTTAAAGCC
AAAGCCAACACCAATGAACAGACAATGATAGAAGTCCTTTAGGACTGAATGAGTGTGAGGATCA
AACCACAAAGCAAACCGAACGGTCACTTCCAAGCTTGCAACGACTAGGAAATAATGCAACTTCT
TAAGGGCAAAACTGTAAGACTTAGTTGCACAAACACGAGAATTTCACAATAATAGTTCAATTCC
TAGGCTAAACCACCAAGCTAAAATTTAATTGAAAGGGATCGAAGTAGAATTGATTTTATCTGCA
AATCACATTTTTCAATCAAATCAGAGAATTTAGCAAAATTATGGGTGAAAATTCTGCTTGCACA
TTTTCACCATTTTGAAACAAGGTATTCAAGGCTCCGTTTGGTAACCTTTTCGTTTTTAGCTTTT
GTTTTTTACGATCAAATTTACTTCGTCTCTATTTCTTACCATGATTTGCATCTTGAATTATTAG
CTAAATTTCAAAAAAATAAGTTTTTTCTCAAACGAAAACGAGCTTCTTTATTAATGATAAAAAA
AGAGACTAATGCTCAGAGTACAAGAGAGGTATACCAAGAGCAAAAAGGACTAAGAGAACAAATA
CAACATAATCCAAGACAAGAGAGAGCATAAAGAAATTACAATGAGCAGGGCAGGATCCTCTAGA
ACCCCAGCAAAACAAGGCAAAATGAAACAACTTTCAACAACGAGCCCTAAGACAACTGATAATT
CCTGTGTAATTTAAGCTACACAGAACTTGGGTTTGTCACTTAGATTTTGTAGGGGCTCTCTCTA
AATTTTTGTGTTTCTCTAAGTTTGAATTGAATCTAGTGCTTTTGTATTCCAATCATCTAATTGT
AAGATACATAGCCTTCTTATATAGGAGAAAGGCTAAAACCATAAAAGGAAAGAATTACAATTAG
AATAGAATATAATTATTAAACTGCCAATTCACCAAAAAACTTAAGCTGGTGGTTGAAGGAAAAT
TTAAATATATATTACCAACACTCCCCCTCACTTGTGGGCTTGAAATATTTAAAAGGCCCAACAA
GTGGAAATCAATTTTAATTGGGGAGGAAACGACAATGTAGGGGCTTGAACACAAGACCTTCCTG
GACCACCTGCTCTGATACCATATTAAACCACCAATTCACCTAAAAGTTTAAGATGGTGGTTGAA
GAAAAATTTAATTATATATCACCAAATATTATATTTGGTGATTTTACAGCTAATTCTCTTATTT
ACAATCAACAGTTTCTTGGTTGATGGATTTTCATCCTATTTGGCATGTAGTCTTCTTCATCTTC
AGTTGTTTCTCTCTCTTATATTTGTCTTCTATTTGGTGATTTTGTATTTTTGGAGCGTTAGTCT
CTTTTCATAATATCAATGAAATTTTAAGTAACATACATATCTATCTATACATATATTTGGGCTG
ACTTGATAAAGGCCTGTCTTGAGAAAATAGTTCTATTGACATTCAATGTTTGGTTCAGTTTTGC
ATCATAATTTATAGAAGTATGTTTTCCCCTTGATTGTTCTTGAGGAATGGTTTGGACCTTTTGG
TGCTTTCCTTTTTCTGGTTATTGAAATTCAGTATGCATTTGTATCACTCGCACAGTTAACATCA
AGAGTTGAGCTACCGTCAGGTTGGGAATGGATTGATGATTGGCATTTGGACAAGACATCTCAAA
CTGCTGATGATGGTTGGGTTTATGCTCCAGATGTCAAAAGTTTAAAATGGCCTGATTCCTCCGA
CTCAAAATCTGTAAACCATGCAAGGCAAAGGAGGTGGGTCAGAAATAGGAGACAGATCGTAAAC
AATATAAAGAAGGAAGTATTCATAGGGCAGTTGAAGCCAGGTGATACAGTTCCTCTACCTTTAT
CGGTGCTGAAACATTCTGGACTTTATATCTTTCATTTTAGGCCTTCGACTCTTAATAATTGTGA
TGAGTACTCTTGGAGTTCAGTTGTAGATAAACCAAATAAAGAGGATGTTAATGGGCCTCATATT
TTTTCTGAAATATGTATTTCAACCCTAAGTGAATCTGAGGAGTTGTTGTATTGTGCTCAGACAA
GCGGAACGTCGTCAAGTAGTACCCATATGTTATGGTTTTGCTTAGGCATACGAGCATTGGAAAT
TGCCAAAGATATACACTCTGACCCTATTCAGGACTGGAATCTTGTTATCAAGGCTCCATTATCT
ATTGCCAATTACCTTCCACTTGTTACAGAATTTTCTGTTCTAGAGAAACAGAAAAGTGGCCATT
TCATTGATTGCTGCAGAGCAATCCTTCATCCAGGGAAAACTGTGAAGGTCTACGATGCTGATAT
CAGAAATCCATTGTTCTTTTCACTCTTCCCACAGAGGGGATGGCTTCCTGTACATGTAAATTTA
GTTCTCTTTCATCTTGCTACATTGTTTATGAGAGAATTTGCTGAATTCATGGGTTTTTTCTTAA
ACCTCTGTTTTTTTCCTTTTTGACAGGAAGCAGTTCTTATATCCCATCCTCATGGAGTTCCATC
AAGAACATTAAGTTTGAGAAGTTCAATTACTGGAAGGTTCCATTTTTTATCCCTACCCTACTTG
TCTCTCAATTTATCTTCATGGAGACCAACTTGGGTGTGATTTGTGCAGGGTTGTTCAAGTTATT
CTTGAACAAAATCATAATAAGGAACATCCATTTCTGGAGAAGATCATCAGATTCTATGCGCCCT
ACTGGTTTTCTATTTCTAGATGCCCTCCTCTCACACTCCATCTTGTAGACAGATCAGGGAGAAA
AAAATCGCGAAAGATTTATCACCGGTTTAAGTCCAACACTAATACCGACATATTTGAGGAAATA
ACTGAAGAAGAAATACACGAAGGCTACACAATCGCTTCTGCTCTGAACTTCAATTCGTTGGGCC
TCTCTGTGTCAATTAATCAATCTGGGACAAACAAATGTGTAACTGTCGAAGATCTATCTCCTCT
TGGCGACATGGTAAGTATTTCAAATTATGAGTCTATTATCTTCTTCAAATGGAACGGACTTCGT
TATTTATTTGATTTTATCTGCAGGATGGATCCTTAGATCTCTATGCTTGTGATGATGATGAGGG
AAAGCGTATGCAGCTTTTCATTTCAACAAAACCATGTCCCTATCAATCTGTACCAACCAAG
						
					

			
		

Sequences
Splice junction sequence	TGGATCCTTAGATCTCTATGCTTGTGATGATGATGAGGGAAAGCGTATGCAGCTTTTCATTTCA ACAAAACCATGTCCCTATCAATCTGTACCAACCAAGgggatgctactggattcttttctgctcc tttaacacagatagcacagatcttggaggatgaatttcatttgcatgatcacgtgaataggata agcagtat
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GGGATGCTACTGGATTCTTTTCTGCTCCTTTAACACAGATAGCACAGATCTTGGAGGATGAATT TCATTTGCATGATCACGTGAATAGGATAAGCAGTATTGAACTTGCTCCACCAGAATTGGTAATG GGTCTTGTTCTTCCTGTATGATATGTAACCGTTTGGCTTCCATCTGAAAGTGTTACATTAATTG TCAAATGCCAATATGTTACTATCACACTTCCTAATTTAAATTCTAAGAATTATATCACAGGGGA AAACAGGCAAGTCCAGTGGAAGATTAAATTGTACTGTTCTTTTGTCGCCCAAACCAGAATTTGA GAACATTAATCAATCTCAAAAGAGAGGAAGAAAATCTGGTTCTATTCAAATAAGTCCGACCAGG ACTGGCCCTTGGACTACTGTTAGGTTAAACTATGCTACACCAGCTGCCTGTTGGCGCTTGGGGA ATGATGTAATCGCCAGCCAAGTGACTGTCAAGGATAGCAGCCGATATGTGACAATAAGGTCTCT CGTCTCAGTGCAGAACAATACTGATTTTATACTTGATGTATGCCTCATGTCCAAACATTACAAG GAAGGCATACATCTCCTGAATGAAACTGGTAATTCTGATGGTTCAACCACCGAGAGTAACATGG TTGTCATAGAAGAGTTCTATGAAACCGAAAAGTACATCCCCACTGCTGGCTGGGTTAGCTGCCT GAAACTCAGTCAGGATTTTTCAGAAGGAATTATCCCGGAGGTAATAATCGTACTCTCTAAGAGA GTAAAGATGAATTCAAATTATGATCATTTAGAGAAGTAAATGGTTAAAATCAAATGAAGAAAAA CTTTTTTTTTCATATAATTTTATTAAAAAGAACTTCGTCTGTTACATGTTTGGTGGAATTCTAG CTGGTCGTGTCCTTAAAACTTAGTATAATTTAATTACTCATATTAATATCTAGTGATGTTTATG TTGTATTTTTCTTCTAAATTTCTTTGTCAGATCGCTTTGTTTATGCTTAATTGACATAAGGATG AATCACTCTTCTATAATCTCTGGCCGTGGGAGGACTCAACCATTGTGCGACTGATAAAATTTGA ATTTTATTAAATAATTCCTCTTTCTTACTTTAGAAGAACACAAAGGTCTATCTTGAATAGAAGG ACCTAAAGCATAAACGTAAATAATCCTACCATTATAATTACATTCTAATTACAACTAATGTAAT CCCCTCAAGTTGGTGTAAAGACTTCCGTTGACAACTTGTTTTGAAAAGGAAACCAAAGTTTTCA TTGAGAAAATGAAAAGAGATTAATACTCAAAAGTACATTAACCTACAGGAAAAGAGAAACTAAG AAAACAAAAGAAGCAATACCATTGAGGTACAAAGGAGAGAAGATATCAAAAAGCAAACACTTAA GACCTAACAAACTAGACTAGCTCTAGAAAAGAAACCAAAGCTAGATAACACATAATTTAAAGCC AAAGCCAACACCAATGAACAGACAATGATAGAAGTCCTTTAGGACTGAATGAGTGTGAGGATCA AACCACAAAGCAAACCGAACGGTCACTTCCAAGCTTGCAACGACTAGGAAATAATGCAACTTCT TAAGGGCAAAACTGTAAGACTTAGTTGCACAAACACGAGAATTTCACAATAATAGTTCAATTCC TAGGCTAAACCACCAAGCTAAAATTTAATTGAAAGGGATCGAAGTAGAATTGATTTTATCTGCA AATCACATTTTTCAATCAAATCAGAGAATTTAGCAAAATTATGGGTGAAAATTCTGCTTGCACA TTTTCACCATTTTGAAACAAGGTATTCAAGGCTCCGTTTGGTAACCTTTTCGTTTTTAGCTTTT GTTTTTTACGATCAAATTTACTTCGTCTCTATTTCTTACCATGATTTGCATCTTGAATTATTAG CTAAATTTCAAAAAAATAAGTTTTTTCTCAAACGAAAACGAGCTTCTTTATTAATGATAAAAAA AGAGACTAATGCTCAGAGTACAAGAGAGGTATACCAAGAGCAAAAAGGACTAAGAGAACAAATA CAACATAATCCAAGACAAGAGAGAGCATAAAGAAATTACAATGAGCAGGGCAGGATCCTCTAGA ACCCCAGCAAAACAAGGCAAAATGAAACAACTTTCAACAACGAGCCCTAAGACAACTGATAATT CCTGTGTAATTTAAGCTACACAGAACTTGGGTTTGTCACTTAGATTTTGTAGGGGCTCTCTCTA AATTTTTGTGTTTCTCTAAGTTTGAATTGAATCTAGTGCTTTTGTATTCCAATCATCTAATTGT AAGATACATAGCCTTCTTATATAGGAGAAAGGCTAAAACCATAAAAGGAAAGAATTACAATTAG AATAGAATATAATTATTAAACTGCCAATTCACCAAAAAACTTAAGCTGGTGGTTGAAGGAAAAT TTAAATATATATTACCAACACTCCCCCTCACTTGTGGGCTTGAAATATTTAAAAGGCCCAACAA GTGGAAATCAATTTTAATTGGGGAGGAAACGACAATGTAGGGGCTTGAACACAAGACCTTCCTG GACCACCTGCTCTGATACCATATTAAACCACCAATTCACCTAAAAGTTTAAGATGGTGGTTGAA GAAAAATTTAATTATATATCACCAAATATTATATTTGGTGATTTTACAGCTAATTCTCTTATTT ACAATCAACAGTTTCTTGGTTGATGGATTTTCATCCTATTTGGCATGTAGTCTTCTTCATCTTC AGTTGTTTCTCTCTCTTATATTTGTCTTCTATTTGGTGATTTTGTATTTTTGGAGCGTTAGTCT CTTTTCATAATATCAATGAAATTTTAAGTAACATACATATCTATCTATACATATATTTGGGCTG ACTTGATAAAGGCCTGTCTTGAGAAAATAGTTCTATTGACATTCAATGTTTGGTTCAGTTTTGC ATCATAATTTATAGAAGTATGTTTTCCCCTTGATTGTTCTTGAGGAATGGTTTGGACCTTTTGG TGCTTTCCTTTTTCTGGTTATTGAAATTCAGTATGCATTTGTATCACTCGCACAGTTAACATCA AGAGTTGAGCTACCGTCAGGTTGGGAATGGATTGATGATTGGCATTTGGACAAGACATCTCAAA CTGCTGATGATGGTTGGGTTTATGCTCCAGATGTCAAAAGTTTAAAATGGCCTGATTCCTCCGA CTCAAAATCTGTAAACCATGCAAGGCAAAGGAGGTGGGTCAGAAATAGGAGACAGATCGTAAAC AATATAAAGAAGGAAGTATTCATAGGGCAGTTGAAGCCAGGTGATACAGTTCCTCTACCTTTAT CGGTGCTGAAACATTCTGGACTTTATATCTTTCATTTTAGGCCTTCGACTCTTAATAATTGTGA TGAGTACTCTTGGAGTTCAGTTGTAGATAAACCAAATAAAGAGGATGTTAATGGGCCTCATATT TTTTCTGAAATATGTATTTCAACCCTAAGTGAATCTGAGGAGTTGTTGTATTGTGCTCAGACAA GCGGAACGTCGTCAAGTAGTACCCATATGTTATGGTTTTGCTTAGGCATACGAGCATTGGAAAT TGCCAAAGATATACACTCTGACCCTATTCAGGACTGGAATCTTGTTATCAAGGCTCCATTATCT ATTGCCAATTACCTTCCACTTGTTACAGAATTTTCTGTTCTAGAGAAACAGAAAAGTGGCCATT TCATTGATTGCTGCAGAGCAATCCTTCATCCAGGGAAAACTGTGAAGGTCTACGATGCTGATAT CAGAAATCCATTGTTCTTTTCACTCTTCCCACAGAGGGGATGGCTTCCTGTACATGTAAATTTA GTTCTCTTTCATCTTGCTACATTGTTTATGAGAGAATTTGCTGAATTCATGGGTTTTTTCTTAA ACCTCTGTTTTTTTCCTTTTTGACAGGAAGCAGTTCTTATATCCCATCCTCATGGAGTTCCATC AAGAACATTAAGTTTGAGAAGTTCAATTACTGGAAGGTTCCATTTTTTATCCCTACCCTACTTG TCTCTCAATTTATCTTCATGGAGACCAACTTGGGTGTGATTTGTGCAGGGTTGTTCAAGTTATT CTTGAACAAAATCATAATAAGGAACATCCATTTCTGGAGAAGATCATCAGATTCTATGCGCCCT ACTGGTTTTCTATTTCTAGATGCCCTCCTCTCACACTCCATCTTGTAGACAGATCAGGGAGAAA AAAATCGCGAAAGATTTATCACCGGTTTAAGTCCAACACTAATACCGACATATTTGAGGAAATA ACTGAAGAAGAAATACACGAAGGCTACACAATCGCTTCTGCTCTGAACTTCAATTCGTTGGGCC TCTCTGTGTCAATTAATCAATCTGGGACAAACAAATGTGTAACTGTCGAAGATCTATCTCCTCT TGGCGACATGGTAAGTATTTCAAATTATGAGTCTATTATCTTCTTCAAATGGAACGGACTTCGT TATTTATTTGATTTTATCTGCAGGATGGATCCTTAGATCTCTATGCTTGTGATGATGATGAGGG AAAGCGTATGCAGCTTTTCATTTCAACAAAACCATGTCCCTATCAATCTGTACCAACCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.091804962

Conservation Information
Conserved circRNAs	NA
PMCS	0.091804962

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							39465400-39460934(+)
39465455-39460906(+)
39461436-39460906(+)
						
						Potential amino acid sequence
						
							MLVMMMRESVCSFSFQQNHVPINLYQPRGCYWILFCSFNTDSTDLGG*
MSLSICTNQGDATGFFSAPLTQIAQILEDEFHLHDHVNRISSIELAPPELGKTGKSSGRLNCTV
LLSPKPEFENINQSQKRGRKSGSIQISPTRTGPWTTVRLNYATPAACWRLGNDVIASQVTVKDS
SRYVTIRSLVSVQNNTDFILDVCLMSKHYKEGIHLLNETGNSDGSTTESNMVVIEEFYETEKYI
PTAGWVSCLKLSQDFSEGIIPELTSRVELPSGWEWIDDWHLDKTSQTADDGWVYAPDVKSLKWP
DSSDSKSVNHARQRRWVRNRRQIVNNIKKEVFIGQLKPGDTVPLPLSVLKHSGLYIFHFRPSTL
NNCDEYSWSSVVDKPNKEDVNGPHIFSEICISTLSESEELLYCAQTSGTSSSSTHMLWFCLGIR
ALEIAKDIHSDPIQDWNLVIKAPLSIANYLPLVTEFSVLEKQKSGHFIDCCRAILHPGKTVKVY
DADIRNPLFFSLFPQRGWLPVHEAVLISHPHGVPSRTLSLRSSITGRVVQVILEQNHNKEHPFL
EKIIRFYAPYWFSISRCPPLTLHLVDRSGRKKSRKIYHRFKSNTNTDIFEEITEEEIHEGYTIA
SALNFNSLGLSVSINQSGTNKCVTVEDLSPLGDMDGSLDLYACDDDEGKRMQLFISTKPCPYQS
VPTKGMLLDSFLLL*
MSKHYKEGIHLLNETGNSDGSTTESNMVVIEEFYETEKYIPTAGWVSCLKLSQDFSEGIIPELT
SRVELPSGWEWIDDWHLDKTSQTADDGWVYAPDVKSLKWPDSSDSKSVNHARQRRWVRNRRQIV
NNIKKEVFIGQLKPGDTVPLPLSVLKHSGLYIFHFRPSTLNNCDEYSWSSVVDKPNKEDVNGPH
IFSEICISTLSESEELLYCAQTSGTSSSSTHMLWFCLGIRALEIAKDIHSDPIQDWNLVIKAPL
SIANYLPLVTEFSVLEKQKSGHFIDCCRAILHPGKTVKVYDADIRNPLFFSLFPQRGWLPVHEA
VLISHPHGVPSRTLSLRSSITGRVVQVILEQNHNKEHPFLEKIIRFYAPYWFSISRCPPLTLHL
VDRSGRKKSRKIYHRFKSNTNTDIFEEITEEEIHEGYTIASALNFNSLGLSVSINQSGTNKCVT
VEDLSPLGDMDGSLDLYACDDDEGKRMQLFISTKPCPYQSVPTKGMLLDSFLLL*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	39465400-39460934(+) 39465455-39460906(+) 39461436-39460906(+)
Potential amino acid sequence	MLVMMMRESVCSFSFQQNHVPINLYQPRGCYWILFCSFNTDSTDLGG* MSLSICTNQGDATGFFSAPLTQIAQILEDEFHLHDHVNRISSIELAPPELGKTGKSSGRLNCTV LLSPKPEFENINQSQKRGRKSGSIQISPTRTGPWTTVRLNYATPAACWRLGNDVIASQVTVKDS SRYVTIRSLVSVQNNTDFILDVCLMSKHYKEGIHLLNETGNSDGSTTESNMVVIEEFYETEKYI PTAGWVSCLKLSQDFSEGIIPELTSRVELPSGWEWIDDWHLDKTSQTADDGWVYAPDVKSLKWP DSSDSKSVNHARQRRWVRNRRQIVNNIKKEVFIGQLKPGDTVPLPLSVLKHSGLYIFHFRPSTL NNCDEYSWSSVVDKPNKEDVNGPHIFSEICISTLSESEELLYCAQTSGTSSSSTHMLWFCLGIR ALEIAKDIHSDPIQDWNLVIKAPLSIANYLPLVTEFSVLEKQKSGHFIDCCRAILHPGKTVKVY DADIRNPLFFSLFPQRGWLPVHEAVLISHPHGVPSRTLSLRSSITGRVVQVILEQNHNKEHPFL EKIIRFYAPYWFSISRCPPLTLHLVDRSGRKKSRKIYHRFKSNTNTDIFEEITEEEIHEGYTIA SALNFNSLGLSVSINQSGTNKCVTVEDLSPLGDMDGSLDLYACDDDEGKRMQLFISTKPCPYQS VPTKGMLLDSFLLL* MSKHYKEGIHLLNETGNSDGSTTESNMVVIEEFYETEKYIPTAGWVSCLKLSQDFSEGIIPELT SRVELPSGWEWIDDWHLDKTSQTADDGWVYAPDVKSLKWPDSSDSKSVNHARQRRWVRNRRQIV NNIKKEVFIGQLKPGDTVPLPLSVLKHSGLYIFHFRPSTLNNCDEYSWSSVVDKPNKEDVNGPH IFSEICISTLSESEELLYCAQTSGTSSSSTHMLWFCLGIRALEIAKDIHSDPIQDWNLVIKAPL SIANYLPLVTEFSVLEKQKSGHFIDCCRAILHPGKTVKVYDADIRNPLFFSLFPQRGWLPVHEA VLISHPHGVPSRTLSLRSSITGRVVQVILEQNHNKEHPFLEKIIRFYAPYWFSISRCPPLTLHL VDRSGRKKSRKIYHRFKSNTNTDIFEEITEEEIHEGYTIASALNFNSLGLSVSINQSGTNKCVT VEDLSPLGDMDGSLDLYACDDDEGKRMQLFISTKPCPYQSVPTKGMLLDSFLLL*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						He et al., 2020

circRNA

Detail information of Csa3G912290_circ_g.5

Address

Any questions?

Supported by