Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d009562_circ_g.2 |
ID in PlantcircBase | zma_circ_005644 |
Alias | tassel_test_circ_000219 |
Organism | Zea mays |
Position | chr8: 70202972-70203092 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d009562 |
Parent gene annotation |
Putative homeodomain-like transcription factor superfamily prote in |
Parent gene strand | + |
Alternative splicing | Zm00001d009562_circ_g.1 |
Support reads | NA |
Tissues | tassel |
Exon boundary | No-No |
Splicing signals | GT-AA |
Number of exons covered | Zm00001d009562_T035:1 Zm00001d009562_T012:1 Zm00001d009562_T015:1 Zm00001d009562_T030:1 Zm00001d009562_T029:1 Zm00001d009562_T013:1 Zm00001d009562_T023:1 Zm00001d009562_T024:1 Zm00001d009562_T034:1 Zm00001d009562_T063:1 Zm00001d009562_T003:1 Zm00001d009562_T005:1 Zm00001d009562_T021:1 Zm00001d009562_T043:1 Zm00001d009562_T058:1 Zm00001d009562_T066:1 Zm00001d009562_T007:1 Zm00001d009562_T001:1 Zm00001d009562_T051:1 Zm00001d009562_T064:1 Zm00001d009562_T036:1 Zm00001d009562_T050:1 Zm00001d009562_T025:1 Zm00001d009562_T087:1 Zm00001d009562_T032:1 Zm00001d009562_T045:1 Zm00001d009562_T057:1 Zm00001d009562_T067:1 Zm00001d009562_T020:1 Zm00001d009562_T049:1 Zm00001d009562_T052:1 Zm00001d009562_T017:1 Zm00001d009562_T004:1 Zm00001d009562_T002:1 Zm00001d009562_T082:1 Zm00001d009562_T062:1 Zm00001d009562_T033:1 Zm00001d009562_T044:1 Zm00001d009562_T019:1 Zm00001d009562_T037:1 Zm00001d009562_T018:1 Zm00001d009562_T046:1 Zm00001d009562_T040:1 Zm00001d009562_T026:1 Zm00001d009562_T016:1 Zm00001d009562_T009:1 Zm00001d009562_T022:1 Zm00001d009562_T038:1 Zm00001d009562_T006:1 Zm00001d009562_T028:1 Zm00001d009562_T060:1 Zm00001d009562_T041:1 Zm00001d009562_T069:1 Zm00001d009562_T031:1 Zm00001d009562_T008:1 Zm00001d009562_T014:1 Zm00001d009562_T011:1 Zm00001d009562_T039:1 Zm00001d009562_T027:1 Zm00001d009562_T079:1 Zm00001d009562_T010:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.593801928 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |