CircRNA Name |
AT2G10940_circ_g.10 |
ID in PlantcircBase |
ath_circ_013146 |
Alias |
NA |
Organism |
Arabidpsis thaliana |
Position |
chr2: 4311606-4311755 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
e-circRNA
|
Identification method |
circRNA_finder, circseq_cup, find_circ |
Parent gene |
AT2G10940 |
Parent gene annotation |
At2g10940/F15K19.1 |
Parent gene strand |
- |
Alternative splicing |
AT2G10940_circ_g.1 AT2G10940_circ_g.2 AT2G10940_circ_g.3 AT2G10940_circ_g.4 AT2G10940_circ_g.5 AT2G10940_circ_g.6 AT2G10940_circ_g.7 AT2G10940_circ_g.8 AT2G10940_circ_g.9 AT2G10940_circ_g.11 AT2G10940_circ_g.12 AT2G10940_circ_g.13 |
Support reads |
42 |
Tissues |
leaf, aerial, inflorescences, whole_plant |
Exon boundary |
No-No
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT2G10940.1:1 AT2G10940.2:1
|