Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d022180_circ_g.1 |
ID in PlantcircBase | zma_circ_009473 |
Alias | zma_circ_0002650 |
Organism | Zea mays |
Position | chr7: 171992189-172002790 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d022180 |
Parent gene annotation |
ribosomal proteinS6 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d022180_T010:3 Zm00001d022180_T007:2 Zm00001d022180_T001:2 Zm00001d022180_T004:2 Zm00001d022180_T002:2 Zm00001d022180_T008:2 Zm00001d022180_T005:2 Zm00001d022180_T006:2 Zm00001d022180_T011:3 Zm00001d022180_T003:2 Zm00001d022180_T009:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 1.040829767 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ma et al., 2021b |