Plant Circular RNA Database

Detail information of orai.012G022500_circ_g.1

			
						 General Information
					
						CircRNA Name
						orai.012G022500_circ_g.1
					
						ID in PlantcircBase
						gra_circ_001299
					
						Alias
						Chr12:2768323|2770596
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr12: 2768323-2770596  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.012G022500						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						5
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.012G022500.2:5
Gorai.012G022500.3:5
Gorai.012G022500.1:5
Gorai.012G022500.4:5

General Information
CircRNA Name	orai.012G022500_circ_g.1
ID in PlantcircBase	gra_circ_001299
Alias	Chr12:2768323\|2770596
Organism	Gossypium raimondii
Position	chrChr12: 2768323-2770596 JBrowse»
Reference genome	Graimondii_221
Type	e-circRNA
Identification method	CIRI
Parent gene	Gorai.012G022500
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	NA
Support reads	5
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.012G022500.2:5 Gorai.012G022500.3:5 Gorai.012G022500.1:5 Gorai.012G022500.4:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCTTTGCCTCTACAAATGTTGGTGAGGTTTCATCAGTTACTGGATCTTCAGGTATTAAGCTTGC
CACAAGTTCAGACCAAAAACCAGAGAACTTAAGCAGatctgaaattgatcatttgacgaggtta
ctatgctcaagaagtgctgatattcctggtggaaatgaagaaaagaggcctgaattgatctcag
tggtatct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1722
Transcript exons: 2768323-2768512,2768641-2768919,2769027-2769119,2769217-
2769870,2770091-2770596
ATCTGAAATTGATCATTTGACGAGGTTACTATGCTCAAGAAGTGCTGATATTCCTGGTGGAAAT
GAAGAAAAGAGGCCTGAATTGATCTCAGTGGTATCTCATGACAAGAAAGAAGAATTTCCAAAGA
CACCAGTTAGAGAACATGTGACTGAGAACCATCTTATTTCAACACCTGTTGTCAGCTCAACTGT
CATTGATGATGTTGTTGCTTCACCTGCTGAGCTTGCAAAAGCTTACATGGGTAATAAGACGCCA
AAAGTATCTGCATCAAGGCTTGGACTACAAAATCAAGTGCCTAGGGGAGATTTAACTTGTCCAA
GCAATAAAAATTTCCCTTCTATGTCTTCCACAATGTCACTTGTGCCAAGATCTTCTGGTCATGT
TGGTAATCTTGGAAACAGTTTTGTGACCCCAAGATTAAGGGGCAGGTCTGCAATATACAGCATG
GCACGGACACCTTATTCCAGGAGTTCTGGCACTGCAAGTGATGCTTTTGGTGGACCTTCATCAT
CATCTCAGAGTGCTTGGGAGCAAAAGAGAATTTCTGGCTCTACACAAGGGGTTTTAAAGCGCAG
GAGTTCAGTATTAGACAATGATATAGGATCAGTTGGCCCTATTCGGCGGATTCGTCAAAAGTCC
AACCTTCTTTCTTCAAGAAACTTAAGCTTACCTACTTCTGCCGGCCCATCTGCTCGCATAGCTG
GCAATAGTTCAGCTGCTCTAGATACTCTGGCTGAGAATGGGGATAACAGCTCTCCTGGCACTAG
TGTTACCACTGTTCCATCCAAGTCCAGTCAGACTGCGTCAAAAATTTTACAGCAATTGGACATG
TTGGTATCCCCAAGGGAAAAATCACCAACTAAGTTGTCACCATCTATGCTACGTGGGCAGGCTC
TTAAAAGCATTGAGAATGTAGATTCTTCAAAATTTCTGGAGAACATGCAAGATACTGACAAGTT
GAGTGGTTCTTGCACTGCCCTTCCTGGTATTTGTGAGTCTATGTCAGGAAAGCATGATAAGGCT
AAGGAAAATGGCTCAACAATGATGGTTGCTCTTCCTAACAAGGCGGTTCCTGCAGTAAATGGTG
CAGATAGTAATAGTTTGATGAAGGATAATAACATGCCTAGTGTTAAAGCTTCTGATTCCAGTGT
GATCAAGTCTATTGTACCACAACCTCAACAAAAGAGTCGGGCTTTTCAGATGAGTGCACATGAG
GATTATCTAGATCTGGATGATGATGACTATCCTAATGGAGCCACACCTGCCGAAGGGAGAGGGA
GGTTGGATAATTGTCTCATGGAGAGTAAGAGTGCAGCTCCTGAAGCTATGATAGATAAGGCTTC
TAGTCCTGAAGTTATACCCAATTCAAGTGCTGCATTCAATCAAAAACCTGATTTGAAAACATCT
GATGGACCCACAGGTGTTGAAAAGAATGCTGGTATTACTTCTCCAGTTGTAGAGGTGGCTATTT
CATCTCTGCAGTCTCCACTTTTTGTATCTTCGTCAACTCCCATAGCCGATAGAGACGTTGTCCC
TTCACAGTCAAATGCTCCTCATATGCTTAGCATTGGGGAGAAAGTTGTGGAAGCAAAGCAATCA
AATGGTGCTGTTACTTCATTTGGCTTTGCCTCTACAAATGTTGGTGAGGTTTCATCAGTTACTG
GATCTTCAGGTATTAAGCTTGCCACAAGTTCAGACCAAAAACCAGAGAACTTAAGCAG
						
					

						Genomic sequence
						
							ATCTGAAATTGATCATTTGACGAGGTTACTATGCTCAAGAAGTGCTGATATTCCTGGTGGAAAT
GAAGAAAAGAGGCCTGAATTGATCTCAGTGGTATCTCATGACAAGAAAGAAGAATTTCCAAAGA
CACCAGTTAGAGAACATGTGACTGAGAACCATCTTATTTCAACACCTGTTGTCAGCTCAACTGT
AAGGAAAAGCTTTCTTTCCTTCAATTTGCTTTTGGGCTAACATATCTTCAAATGATTTTTCCTA
GTCTGTATAATTTTAATTTCATAGATTGAAAAAAGAAGAAAAACACTTTTATGGTTCTGCAGGT
CATTGATGATGTTGTTGCTTCACCTGCTGAGCTTGCAAAAGCTTACATGGGTAATAAGACGCCA
AAAGTATCTGCATCAAGGCTTGGACTACAAAATCAAGTGCCTAGGGGAGATTTAACTTGTCCAA
GCAATAAAAATTTCCCTTCTATGTCTTCCACAATGTCACTTGTGCCAAGATCTTCTGGTCATGT
TGGTAATCTTGGAAACAGTTTTGTGACCCCAAGATTAAGGGGCAGGTCTGCAATATACAGCATG
GCACGGACACCTTATTCCAGGGTTAACTCATCAACTCTCCTCAAGGCTGTTATGCTTTGCTATC
TTTCCTCTTCTATAATTGCTTGTTTGTCATTTGTCTAATCTGAGTTTTTGGCTTATTCTTTTAG
AGTTCTGGCACTGCAAGTGATGCTTTTGGTGGACCTTCATCATCATCTCAGAGTGCTTGGGAGC
AAAAGAGAATTTCTGGCTCTACACAAGGGGTACTTATTCAGGATCTTTGTATTTCTCCCTTTGA
GGGTGTTTTTTCCTCTCTGTCTAGAGAGTATCATTCAGTGGATATTTTTCTTTTCTTAGCAGGT
TTTAAAGCGCAGGAGTTCAGTATTAGACAATGATATAGGATCAGTTGGCCCTATTCGGCGGATT
CGTCAAAAGTCCAACCTTCTTTCTTCAAGAAACTTAAGCTTACCTACTTCTGCCGGCCCATCTG
CTCGCATAGCTGGCAATAGTTCAGCTGCTCTAGATACTCTGGCTGAGAATGGGGATAACAGCTC
TCCTGGCACTAGTGTTACCACTGTTCCATCCAAGTCCAGTCAGACTGCGTCAAAAATTTTACAG
CAATTGGACATGTTGGTATCCCCAAGGGAAAAATCACCAACTAAGTTGTCACCATCTATGCTAC
GTGGGCAGGCTCTTAAAAGCATTGAGAATGTAGATTCTTCAAAATTTCTGGAGAACATGCAAGA
TACTGACAAGTTGAGTGGTTCTTGCACTGCCCTTCCTGGTATTTGTGAGTCTATGTCAGGAAAG
CATGATAAGGCTAAGGAAAATGGCTCAACAATGATGGTTGCTCTTCCTAACAAGGCGGTTCCTG
CAGTAAATGGTGCAGATAGTAATAGTTTGATGAAGGATAATAACATGCCTAGTGTTAAAGCTTC
TGATTCCAGTGTGATCAAGTCTATTGTACCACAACCTCAACAAAAGAGTCGGGCTTTTCAGATG
AGTGCACATGAGGTATGTGTTAATTGGTAATCGGGCATATCTCATGTCAAAATTATTTAGTGAT
CAAATAGAGCTGTTAATGATCAGAATTCCTCCCGGTTCTTTTGCTGATCAAGTGCTATTGTTTC
CAGAAGACGAGGCTCTATCAAAGGCTTACTTTTGGATTGAGGGATATCTATAAGCTTCACTTTT
GCCTCTATACTGTCTATTAATTTCATGTTTTCTGTACCAGGATTATCTAGATCTGGATGATGAT
GACTATCCTAATGGAGCCACACCTGCCGAAGGGAGAGGGAGGTTGGATAATTGTCTCATGGAGA
GTAAGAGTGCAGCTCCTGAAGCTATGATAGATAAGGCTTCTAGTCCTGAAGTTATACCCAATTC
AAGTGCTGCATTCAATCAAAAACCTGATTTGAAAACATCTGATGGACCCACAGGTGTTGAAAAG
AATGCTGGTATTACTTCTCCAGTTGTAGAGGTGGCTATTTCATCTCTGCAGTCTCCACTTTTTG
TATCTTCGTCAACTCCCATAGCCGATAGAGACGTTGTCCCTTCACAGTCAAATGCTCCTCATAT
GCTTAGCATTGGGGAGAAAGTTGTGGAAGCAAAGCAATCAAATGGTGCTGTTACTTCATTTGGC
TTTGCCTCTACAAATGTTGGTGAGGTTTCATCAGTTACTGGATCTTCAGGTATTAAGCTTGCCA
CAAGTTCAGACCAAAAACCAGAGAACTTAAGCAG
						
					

			
		

Sequences
Splice junction sequence	GCTTTGCCTCTACAAATGTTGGTGAGGTTTCATCAGTTACTGGATCTTCAGGTATTAAGCTTGC CACAAGTTCAGACCAAAAACCAGAGAACTTAAGCAGatctgaaattgatcatttgacgaggtta ctatgctcaagaagtgctgatattcctggtggaaatgaagaaaagaggcctgaattgatctcag tggtatct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1722 Transcript exons: 2768323-2768512,2768641-2768919,2769027-2769119,2769217- 2769870,2770091-2770596 ATCTGAAATTGATCATTTGACGAGGTTACTATGCTCAAGAAGTGCTGATATTCCTGGTGGAAAT GAAGAAAAGAGGCCTGAATTGATCTCAGTGGTATCTCATGACAAGAAAGAAGAATTTCCAAAGA CACCAGTTAGAGAACATGTGACTGAGAACCATCTTATTTCAACACCTGTTGTCAGCTCAACTGT CATTGATGATGTTGTTGCTTCACCTGCTGAGCTTGCAAAAGCTTACATGGGTAATAAGACGCCA AAAGTATCTGCATCAAGGCTTGGACTACAAAATCAAGTGCCTAGGGGAGATTTAACTTGTCCAA GCAATAAAAATTTCCCTTCTATGTCTTCCACAATGTCACTTGTGCCAAGATCTTCTGGTCATGT TGGTAATCTTGGAAACAGTTTTGTGACCCCAAGATTAAGGGGCAGGTCTGCAATATACAGCATG GCACGGACACCTTATTCCAGGAGTTCTGGCACTGCAAGTGATGCTTTTGGTGGACCTTCATCAT CATCTCAGAGTGCTTGGGAGCAAAAGAGAATTTCTGGCTCTACACAAGGGGTTTTAAAGCGCAG GAGTTCAGTATTAGACAATGATATAGGATCAGTTGGCCCTATTCGGCGGATTCGTCAAAAGTCC AACCTTCTTTCTTCAAGAAACTTAAGCTTACCTACTTCTGCCGGCCCATCTGCTCGCATAGCTG GCAATAGTTCAGCTGCTCTAGATACTCTGGCTGAGAATGGGGATAACAGCTCTCCTGGCACTAG TGTTACCACTGTTCCATCCAAGTCCAGTCAGACTGCGTCAAAAATTTTACAGCAATTGGACATG TTGGTATCCCCAAGGGAAAAATCACCAACTAAGTTGTCACCATCTATGCTACGTGGGCAGGCTC TTAAAAGCATTGAGAATGTAGATTCTTCAAAATTTCTGGAGAACATGCAAGATACTGACAAGTT GAGTGGTTCTTGCACTGCCCTTCCTGGTATTTGTGAGTCTATGTCAGGAAAGCATGATAAGGCT AAGGAAAATGGCTCAACAATGATGGTTGCTCTTCCTAACAAGGCGGTTCCTGCAGTAAATGGTG CAGATAGTAATAGTTTGATGAAGGATAATAACATGCCTAGTGTTAAAGCTTCTGATTCCAGTGT GATCAAGTCTATTGTACCACAACCTCAACAAAAGAGTCGGGCTTTTCAGATGAGTGCACATGAG GATTATCTAGATCTGGATGATGATGACTATCCTAATGGAGCCACACCTGCCGAAGGGAGAGGGA GGTTGGATAATTGTCTCATGGAGAGTAAGAGTGCAGCTCCTGAAGCTATGATAGATAAGGCTTC TAGTCCTGAAGTTATACCCAATTCAAGTGCTGCATTCAATCAAAAACCTGATTTGAAAACATCT GATGGACCCACAGGTGTTGAAAAGAATGCTGGTATTACTTCTCCAGTTGTAGAGGTGGCTATTT CATCTCTGCAGTCTCCACTTTTTGTATCTTCGTCAACTCCCATAGCCGATAGAGACGTTGTCCC TTCACAGTCAAATGCTCCTCATATGCTTAGCATTGGGGAGAAAGTTGTGGAAGCAAAGCAATCA AATGGTGCTGTTACTTCATTTGGCTTTGCCTCTACAAATGTTGGTGAGGTTTCATCAGTTACTG GATCTTCAGGTATTAAGCTTGCCACAAGTTCAGACCAAAAACCAGAGAACTTAAGCAG
Genomic sequence	ATCTGAAATTGATCATTTGACGAGGTTACTATGCTCAAGAAGTGCTGATATTCCTGGTGGAAAT GAAGAAAAGAGGCCTGAATTGATCTCAGTGGTATCTCATGACAAGAAAGAAGAATTTCCAAAGA CACCAGTTAGAGAACATGTGACTGAGAACCATCTTATTTCAACACCTGTTGTCAGCTCAACTGT AAGGAAAAGCTTTCTTTCCTTCAATTTGCTTTTGGGCTAACATATCTTCAAATGATTTTTCCTA GTCTGTATAATTTTAATTTCATAGATTGAAAAAAGAAGAAAAACACTTTTATGGTTCTGCAGGT CATTGATGATGTTGTTGCTTCACCTGCTGAGCTTGCAAAAGCTTACATGGGTAATAAGACGCCA AAAGTATCTGCATCAAGGCTTGGACTACAAAATCAAGTGCCTAGGGGAGATTTAACTTGTCCAA GCAATAAAAATTTCCCTTCTATGTCTTCCACAATGTCACTTGTGCCAAGATCTTCTGGTCATGT TGGTAATCTTGGAAACAGTTTTGTGACCCCAAGATTAAGGGGCAGGTCTGCAATATACAGCATG GCACGGACACCTTATTCCAGGGTTAACTCATCAACTCTCCTCAAGGCTGTTATGCTTTGCTATC TTTCCTCTTCTATAATTGCTTGTTTGTCATTTGTCTAATCTGAGTTTTTGGCTTATTCTTTTAG AGTTCTGGCACTGCAAGTGATGCTTTTGGTGGACCTTCATCATCATCTCAGAGTGCTTGGGAGC AAAAGAGAATTTCTGGCTCTACACAAGGGGTACTTATTCAGGATCTTTGTATTTCTCCCTTTGA GGGTGTTTTTTCCTCTCTGTCTAGAGAGTATCATTCAGTGGATATTTTTCTTTTCTTAGCAGGT TTTAAAGCGCAGGAGTTCAGTATTAGACAATGATATAGGATCAGTTGGCCCTATTCGGCGGATT CGTCAAAAGTCCAACCTTCTTTCTTCAAGAAACTTAAGCTTACCTACTTCTGCCGGCCCATCTG CTCGCATAGCTGGCAATAGTTCAGCTGCTCTAGATACTCTGGCTGAGAATGGGGATAACAGCTC TCCTGGCACTAGTGTTACCACTGTTCCATCCAAGTCCAGTCAGACTGCGTCAAAAATTTTACAG CAATTGGACATGTTGGTATCCCCAAGGGAAAAATCACCAACTAAGTTGTCACCATCTATGCTAC GTGGGCAGGCTCTTAAAAGCATTGAGAATGTAGATTCTTCAAAATTTCTGGAGAACATGCAAGA TACTGACAAGTTGAGTGGTTCTTGCACTGCCCTTCCTGGTATTTGTGAGTCTATGTCAGGAAAG CATGATAAGGCTAAGGAAAATGGCTCAACAATGATGGTTGCTCTTCCTAACAAGGCGGTTCCTG CAGTAAATGGTGCAGATAGTAATAGTTTGATGAAGGATAATAACATGCCTAGTGTTAAAGCTTC TGATTCCAGTGTGATCAAGTCTATTGTACCACAACCTCAACAAAAGAGTCGGGCTTTTCAGATG AGTGCACATGAGGTATGTGTTAATTGGTAATCGGGCATATCTCATGTCAAAATTATTTAGTGAT CAAATAGAGCTGTTAATGATCAGAATTCCTCCCGGTTCTTTTGCTGATCAAGTGCTATTGTTTC CAGAAGACGAGGCTCTATCAAAGGCTTACTTTTGGATTGAGGGATATCTATAAGCTTCACTTTT GCCTCTATACTGTCTATTAATTTCATGTTTTCTGTACCAGGATTATCTAGATCTGGATGATGAT GACTATCCTAATGGAGCCACACCTGCCGAAGGGAGAGGGAGGTTGGATAATTGTCTCATGGAGA GTAAGAGTGCAGCTCCTGAAGCTATGATAGATAAGGCTTCTAGTCCTGAAGTTATACCCAATTC AAGTGCTGCATTCAATCAAAAACCTGATTTGAAAACATCTGATGGACCCACAGGTGTTGAAAAG AATGCTGGTATTACTTCTCCAGTTGTAGAGGTGGCTATTTCATCTCTGCAGTCTCCACTTTTTG TATCTTCGTCAACTCCCATAGCCGATAGAGACGTTGTCCCTTCACAGTCAAATGCTCCTCATAT GCTTAGCATTGGGGAGAAAGTTGTGGAAGCAAAGCAATCAAATGGTGCTGTTACTTCATTTGGC TTTGCCTCTACAAATGTTGGTGAGGTTTCATCAGTTACTGGATCTTCAGGTATTAAGCTTGCCA CAAGTTCAGACCAAAAACCAGAGAACTTAAGCAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.514629053

Conservation Information
Conserved circRNAs	NA
PMCS	0.514629053

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							2768689-2770593(+)
						
					

						Potential amino acid sequence
						
							MGNKTPKVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGR
SAIYSMARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIR
RIRQKSNLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKI
LQQLDMLVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMS
GKHDKAKENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAF
QMSAHEDYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQK
PDLKTSDGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKV
VEAKQSNGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLSRSEIDHLTRLLCSRSADI
PGGNEEKRPELISVVSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMG
NKTPKVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGRSA
IYSMARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIRRI
RQKSNLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKILQ
QLDMLVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMSGK
HDKAKENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAFQM
SAHEDYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQKPD
LKTSDGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKVVE
AKQSNGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLSRSEIDHLTRLLCSRSADIPG
GNEEKRPELISVVSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNK
TPKVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGRSAIY
SMARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIRRIRQ
KSNLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKILQQL
DMLVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMSGKHD
KAKENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAFQMSA
HEDYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQKPDLK
TSDGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKVVEAK
QSNGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLSRSEIDHLTRLLCSRSADIPGGN
EEKRPELISVVSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNKTP
KVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGRSAIYSM
ARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIRRIRQKS
NLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKILQQLDM
LVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMSGKHDKA
KENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAFQMSAHE
DYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQKPDLKTS
DGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKVVEAKQS
NGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLS(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	2768689-2770593(+)
Potential amino acid sequence	MGNKTPKVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGR SAIYSMARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIR RIRQKSNLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKI LQQLDMLVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMS GKHDKAKENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAF QMSAHEDYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQK PDLKTSDGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKV VEAKQSNGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLSRSEIDHLTRLLCSRSADI PGGNEEKRPELISVVSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMG NKTPKVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGRSA IYSMARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIRRI RQKSNLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKILQ QLDMLVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMSGK HDKAKENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAFQM SAHEDYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQKPD LKTSDGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKVVE AKQSNGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLSRSEIDHLTRLLCSRSADIPG GNEEKRPELISVVSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNK TPKVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGRSAIY SMARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIRRIRQ KSNLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKILQQL DMLVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMSGKHD KAKENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAFQMSA HEDYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQKPDLK TSDGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKVVEAK QSNGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLSRSEIDHLTRLLCSRSADIPGGN EEKRPELISVVSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNKTP KVSASRLGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSSGHVGNLGNSFVTPRLRGRSAIYSM ARTPYSRSSGTASDAFGGPSSSSQSAWEQKRISGSTQGVLKRRSSVLDNDIGSVGPIRRIRQKS NLLSSRNLSLPTSAGPSARIAGNSSAALDTLAENGDNSSPGTSVTTVPSKSSQTASKILQQLDM LVSPREKSPTKLSPSMLRGQALKSIENVDSSKFLENMQDTDKLSGSCTALPGICESMSGKHDKA KENGSTMMVALPNKAVPAVNGADSNSLMKDNNMPSVKASDSSVIKSIVPQPQQKSRAFQMSAHE DYLDLDDDDYPNGATPAEGRGRLDNCLMESKSAAPEAMIDKASSPEVIPNSSAAFNQKPDLKTS DGPTGVEKNAGITSPVVEVAISSLQSPLFVSSSTPIADRDVVPSQSNAPHMLSIGEKVVEAKQS NGAVTSFGFASTNVGEVSSVTGSSGIKLATSSDQKPENLS(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.012G022500_circ_g.1

Address

Any questions?

Supported by