Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G47840_circ_g.1 |
ID in PlantcircBase | ath_circ_006217 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 17618245-17618395 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer |
Parent gene | AT1G47840 |
Parent gene annotation |
Hexokinase-like 1 protein |
Parent gene strand | - |
Alternative splicing | 1_circ_ag.3 AT1G47840_circ_g.2 |
Support reads | 1 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G47840.1:1 AT1G47840.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.245735152 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |