Detail information of BGIOSGA032222_circ_g.2


General Information
CircRNA Name BGIOSGA032222_circ_g.2
ID in PlantcircBase osi_circ_008821
Alias Chr10:6332928_6338549(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr10: 4815389-4821010  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method CIRCexplorer2
Parent gene BGIOSGA032222
Parent gene annotation NA
Parent gene strand -
Alternative splicing BGIOSGA032222_circ_g.3
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-Yes
Splicing signals   CT-TA
Number of exons covered BGIOSGA032222-TA:16
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CATGAGTTCTTCGAGATGAATAGCTACTGTCATCTAACAAGTCTGTCGATGTGCCAAGGGCCTT
ATTATTTACGATTCTTTTGTCATGTTCATGTGAAACcctgcagctagtcgatgctttaaagacc
tcaatgttgtaagaactgaaacctgtcaaaaaaaaaggaagtatatacacatgtaatatgttat
aaggaaag
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.
Conservation Information
Conserved circRNAs osa_circ_006325
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021