Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d038805_circ_g.1 |
ID in PlantcircBase | zma_circ_002398 |
Alias | circ2037 |
Organism | Zea mays |
Position | chr6: 164802809-164805436 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d038805 |
Parent gene annotation |
Probable transcriptional regulatory protein |
Parent gene strand | - |
Alternative splicing | Zm00001d038805_circ_g.2 |
Support reads | 9 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d038805_T022:4 Zm00001d038805_T021:4 Zm00001d038805_T003:4 Zm00001d038805_T014:4 Zm00001d038805_T011:3 Zm00001d038805_T016:4 Zm00001d038805_T024:2 Zm00001d038805_T017:4 Zm00001d038805_T007:4 Zm00001d038805_T005:4 Zm00001d038805_T009:4 Zm00001d038805_T023:2 Zm00001d038805_T020:3 Zm00001d038805_T004:2 Zm00001d038805_T015:4 Zm00001d038805_T002:4 Zm00001d038805_T012:3 Zm00001d038805_T018:2 Zm00001d038805_T019:5 Zm00001d038805_T010:3 Zm00001d038805_T001:2 Zm00001d038805_T006:5 Zm00001d038805_T008:4 Zm00001d038805_T013:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.101940852 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |