Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G19800_circ_g.2 |
ID in PlantcircBase | ath_circ_003454 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 6847097-6847184 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | circRNA_finder, circseq_cup |
Parent gene | AT1G19800 |
Parent gene annotation |
Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G19800.6:1 AT1G19800.3:1 AT1G19800.4:1 AT1G19800.5:1 AT1G19800.2:1 AT1G19800.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.20045045 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |