Plant Circular RNA Database

Detail information of Os06g0690700_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os06g0690700_circ_g.1
					
						ID in PlantcircBase
						osa_circ_032127
					
						Alias
						Os_ciR10584
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr6: 28790115-28794696  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os06g0690700						
					
						Parent gene annotation
						
							Similar to Potential cadmium/zinc-transporting ATPase HMA1 (EC 3
.6.3.3) (EC 3.6.3.5). (Os06t0690700-01);Similar to HMA1 (Heavy m
etal ATPase 1); copper-exporting ATPase. (Os06t0690700-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os06g0690700_circ_g.2 Os06g0690700_circ_g.3 Os06g0690700_circ_g.4 Os06g0690700_circ_g.5 Os06g0690700_circ_g.6 						
					
						Support reads
						2
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os06t0690700-02:6
Os06t0690700-01:8

General Information
CircRNA Name	Os06g0690700_circ_g.1
ID in PlantcircBase	osa_circ_032127
Alias	Os_ciR10584
Organism	Oryza sativa
Position	chr6: 28790115-28794696 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Os06g0690700
Parent gene annotation	Similar to Potential cadmium/zinc-transporting ATPase HMA1 (EC 3 .6.3.3) (EC 3.6.3.5). (Os06t0690700-01);Similar to HMA1 (Heavy m etal ATPase 1); copper-exporting ATPase. (Os06t0690700-02)
Parent gene strand	-
Alternative splicing	Os06g0690700_circ_g.2 Os06g0690700_circ_g.3 Os06g0690700_circ_g.4 Os06g0690700_circ_g.5 Os06g0690700_circ_g.6
Support reads	2
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os06t0690700-02:6 Os06t0690700-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACTCATCTAGCCATCTTTGCAATTTGGGCTTGTTTAGCTGGCCTTCTTCTGTCAACTGGACGAT
TCTGTTGAGTGTTGAATCCTCCCACGACTTGGTGACcgtcaaccaaagaggaagaaatcccaaa
acagaaggaagtgccgcaaaaacaatacaagacaatgcaagagctacactttgcttgacctgtg
aggatgaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1314
Transcript exons: 28790115-28790201,28790296-28790483,28791621-28791837,28
792446-28792610,28792798-28792903,28793483-28793724,2879
4146-28794258,28794501-28794696
CGTCAACCAAAGAGGAAGAAATCCCAAAACAGAAGGAAGTGCCGCAAAAACAATACAAGACAAT
GCAAGAGCTACACTTTGCTTGACCAAAGAAGTTGTTTGACGAGCTTTAGCTATACAAAATGGCA
CCCCACATATATTATCCTGCAACAAAAGAACATCTGCAACAGCCACCGCTGTTGCACTGGCACG
CTGGGCTAGAACTATACCAACCGTTGCAGCTGCAAGAGCTGGTGCATCATTTATGCCATCACCA
ACCATTATTAGACCTCCACCTCCCTCCCTTGAAACTGCTTTTACTTTATTCAACTTGTCCTCTG
GCTTTAAACAGCAGTGAACTTCGTCGATACAAACAGCTTTAGCAACTCTTAGAGCACTTGATTC
ATGATCTCCCGTAAGCATCATGATGCGAAGTTTAGCCTTGTCTCTTAAGGTAGATATAACTTCA
CATACACCAGAACGGGGTTCATCCTCAAAGTGAAAAAGGGTGACCTTTTTATCCACTGTTAGAG
CAGCCTGGACAAATTCAGGCCCAAATGCAGAAGCTTTTACAGCCTCTTTTATCTGCTCAGATTC
ACCACTGGATCTGTATAGCGAAGAAATGTATTCCACAGAACCAATTGATGCCTTAGAAAGTTCA
TCTTCATTGTTTCCAGCCTTTACACCGCTCAAAGTAGCAACAACTCCTCTACCAGGTAAGCACT
CAAAGCTTTCTACAGCAACCAGTGGGAGGTCCTTCCCAACAGAATGATCTAAAACTGCCCTTCC
AATAGGATGAGTTGTTCCCTTCTCCATAGCTGCAGCAACAGCTAGAGCTTCACTTTCACAGTTA
GGAGTACAACAAGCCTGATCACTAAAATCATTTGTCACATCTGAATGCCCATGAATGGGTTCGA
TAGCTTTGCACATGAGCTTCCCTGTTGTTAATGTTCCTGTCTTGTCAAAAGCAATAGACTGACA
AGCAGAAAGAGCATCCAGCACATGTCCGCCTTTCAACAAAATTCCCTTGCTTGCAAGAGAACTG
ATCGCAGTTGCATATGCTAATGGAGCTACAGCCAATGCACATGGAGATGCAGCAACCATAAGTC
CTAGCCCACGGTAAATTGAGCCCCTACAAACTGAGTTGCCAAAAAAGGGCCACTTAAAGAGTAA
TGGTCCCAGAAGTGCGACAACTAAAGACAGGACCACAACAACTCTGCTATAGTGCTCTCCAAAC
TCATCTAGCCATCTTTGCAATTTGGGCTTGTTTAGCTGGCCTTCTTCTGTCAACTGGACGATTC
TGTTGAGTGTTGAATCCTCCCACGACTTGGTGAC
						
					

						Genomic sequence
						
							CGTCAACCAAAGAGGAAGAAATCCCAAAACAGAAGGAAGTGCCGCAAAAACAATACAAGACAAT
GCAAGAGCTACACTTTGCTTGACCTGTGAGGATGAATCACAAAGTATAAGAACCAGTAATATAT
ATTGTATCTATAGTTAGAAATGTTTTAGAATGAAGCCTCCCAAGAAACAATACCAAAGAAGTTG
TTTGACGAGCTTTAGCTATACAAAATGGCACCCCACATATATTATCCTGCAACAAAAGAACATC
TGCAACAGCCACCGCTGTTGCACTGGCACGCTGGGCTAGAACTATACCAACCGTTGCAGCTGCA
AGAGCTGGTGCATCATTTATGCCATCACCAACCATTATTAGACCTCCACCTGTAATCATGTATA
CATGAATCATAACCAGGAAGTGAAAAAAAAAATAATTCCCTCCAAATAATGAAATGAATACCAC
AAGAGGTAATATATGGCTGTAAGTCAAAAATTCTGATGGATACACAGTTCAGCTGATCCAAAGT
ACGACCACAGAAAGCTTCGAATATTTAATTCTTTAATTATACATGAAGAATGTTTAGTTATGGA
CTTCTATAGACATTTCTGTGGTTGCAGCTGACAGGTTATATCTACATGCAAATAATAACAGATA
ACTATTGGAATCAATTGATCAAGTCATGCAGCAAGAAGGGATGGGGATTAAGCAGAATGTAGCC
AGTACAATTAGACTGTGTTCGTAAGTTCACATTCCCAACCTCCGCTTCCTTGTTTCCCGCGCAC
ATGCTTTCTGAACTACTAAGCGGTATTTTTTTTTTTTGCAAAAATCTATAGAAAAGTTGCTGTA
AAAATCATATTAATCCATTTATGAGTTTTTTAGTAATATTTAATTAATCATGTGCTAATAAGCA
ACCCCGGTTTCCATGCAGTGGTGAACAGAGAATCAAAATTTGGAGTGGGCTAGTGAAAATTAGC
ACAAAACTATCGATTTATGTATATGTTTCTTATATGTGTTTGCCACCATGTTATCATGATTAAA
ACGTGCTTTATTGGTTGATTCATACTATCATTAGTATAGGGAATACTGCTAGTAAAAAAGAAAA
TAATATGCAGTGCAGCTTGCGTGTGCCTGATTTGCCAGCCTCAAATTTAGAGGCCAGTGTCCAC
GGCTCCATGCACACGGCGAAGTATAGCGGATTGGTGGACTCTTGCCTGCCGCACATGAGCTACA
AGTTTGCCAAGATCATGACAGCTGGAGGCGCTAACTAGCAGGAGCACATGCAGCGGGGTGCGTG
GCAGTAGGGGCCTAGGGTGTACCCGAGCCCACTCTGCACCCCCCCCCCCCCCGGCGCGGGTTGT
GTCCACCCCTGTTTCCGTGCACGGGCCTCCCGAACACAGCCTTTTAAGTGGTCAGCATCTAAAG
TACATGTGTTCATAATTAAGTAACAACTGAAAAACTAGCAAAAATACCGTCATATAACCATTTA
ACTGAAAATTTGCAGTCATAAGATATCGACCTACCTCCCTCCCTTGAAACTGCTTTTACTTTAT
TCAACTTGTCCTCTGGCTTTAAACAGCAGTGAACTTCGTCGATACAAACAGCTTTAGCAACTCT
TAGAGCACTTGATTCATGATCTCCCGTAAGCATCATGATGCGAAGTTTAGCCTTGTCTCTTAAG
GTAGATATAACTTCACATACACCAGAACGGGGTTCATCCTCAAAGTGAAAAAGGGTGACCTGAA
ATGAATTTTTCATCAGCAGATGGACAATGCATGGCAGAGTACTTATGAAATAACCTAAATGGTG
ATAAAAAAAATGCAAACGGTTCATCTGCAAGGAAACTGAGCATGAAAGTGTGAACGGAAGTGAC
ATTAGATAATAACAGTCTGTATTTCCATGTTACATGACCAAGATATTTGAACTTGTATGCAGCA
ATAAAGACTAGCAGCACCTCCTGGTTGTCTATTAAAATTTAATTTTACTCCTGTTGCATTTCAT
GATTGATCTCCTAGCCACTTTGATACCAACTGAAATATATCACTTTCTATAAAAAAAATGCATA
TTACAATTTACAGTCAGCAAACATATGAACATTTGGTTTTTAATCTCAGATTCACTCGAAAGAA
AAAAAAAAAAGGCAAACCATCTGAACTTGATAGGCTGAAGGCATATCCACCTTAGCTCCTAAAC
TACCATGTTGAATTACTTTAGCATTTATGCAATTATATAATACACCTATATTTACAGCAGACAT
CTGGACAGATTACTGTGGAACAATATAAAAATAATTTTAGAAAGGGAGAAGTATGCTGACAAAT
GAGAAGATTGTAATGTAATTAACTCACCTTTTTATCCACTGTTAGAGCAGCCTGGACAAATTCA
GGCCCAAATGCAGAAGCTTTTACAGCCTCTTTTATCTGCTCAGATTCACCACTGGATCTGTATA
GCGAAGAAATGTATTCCACAGAACCAATTGATGCCTTAGAAAGTTCATCTTCATTGTTTCCAGC
CTGTAACACATATATGAGGTATCAAGCTAACATACTAAAGATCAATCTTCTCAATAATTTGTAT
TTAAAAAACAAATTCTAGTGCTGTTTGTTTTCAAATCTATGAAACTACATTGCATTACATGACC
CTTTTTTATGTCCAATTTTCAAGATAACCAAGCTGATTGGAATATACTATATAATCTACCTTTA
CACCGCTCAAAGTAGCAACAACTCCTCTACCAGGTAAGCACTCAAAGCTTTCTACAGCAACCAG
TGGGAGGTCCTTCCCAACAGAATGATCTAAAACTGCCCTGTGAATAATGCAATCAGGATGTGAG
TTAGTATGTCAGATTATCCATCATTCTACAAAATTCATAACATACATTAGAAAAATGAAAAACA
GAATCATACAGTGGCCTAAGAATCTCAACATAATTCTTAAAATAGTGGCAAAAAAAAAATTGGT
CTCAACCTAGCAAACCTGATTTCAAATAAGTTGTGGCATCAGACTTCAGGCATAGGCCTAGCGT
TGAAAAAGAAGTTGACAATTTAATCAAGCTGATCTGAAGTAAGCATATCTCAGGTTGATAGATA
CAATGAATTAGGTACTGGTTAAATAGCACTAAGGACGTTATCAAAAAAATAGCACTAAGGACCA
CTATGACTTTGGTCAAACTTCAAAGACCATTTGTATGAGCACAAAGTGTTGGCAAATACTTCAT
GCCAATGTTATGGCATCAAAAGAGGTCAACTAGTGATGAACCATGGTATTATTACAATTAGCAT
GCAAAATTAAATATATACTACTACATGACTTCATCATCTAGCGTAAATAAAAAAAATCAAATAA
GCAAAAAGACAGACAATGAGAATTTTGTCCATGCTCTCACCTTCCAATAGGATGAGTTGTTCCC
TTCTCCATAGCTGCAGCAACAGCTAGAGCTTCACTTTCACAGTTAGGAGTACAACAAGCCTGAT
CACTAAAATCATTTGTCACATCTGAATGCCCATGAATGGGTTCGATAGCTTTGCACATGAGCTT
CCCTGTTGTTAATGTTCCTGTCTTGTCAAAAGCAATAGACTGACAAGCAGAAAGAGCATCCAGC
ACATGTCCGCCTTTCAACAAAATTCCCTACAGATCACCCCCAAAGAAAGGTTTGTGAACAATTT
TACTATGCAGAAGACTCTTGGAGAAGGTCATCAGACATGCCATATTGAACTAAAAAATATTTTG
GCGAAAACTGCTAACATAACATGGTTTCATAGCATGCACTTAAAGCAACAATGGCTATCTTCCT
GCTATTGGTTACAATGCAGCAATAATCATTTCAAGAAATGATTCCAATTAATATCCCCTGATCT
CTTCTAAGATTTGTGCACATAACTCTAGTATAGATAATGCAAAGGAAAAGAAGCAGCCTAGTAG
ACTAATAAAATTCCGAATAAAAATACCAGATTCTTCATGTAATTTAGTAATTGAGTAAGCTTTC
TCTTGCATGGAAAGAAGAAAAATGGCCAGTAGAACTCAAACGATGGAAACTTTCAAACAATACC
TTGCTTGCAAGAGAACTGATCGCAGTTGCATATGCTAATGGAGCTACAGCCAATGCACATGGAG
ATGCAGCAACCATAAGTCCTAGCCCACGGTAAATTGAGCCCCTACAAACTAAAGAAAATGTCAG
TGCACAGAAAGCTTGATCATATAGTCAAATCAATCAGTTCAGTGCAAATTGCATGATCATCAAA
CTTCTTTCTCCTACAATTAAACATATTGGTTCAGTACCCAGATCATTAAGAATAGCTCCCACCT
AAAGCATATTCTACAATTATCAAAGGACCTAGTCAGATTTGATCAATTATATCTGTGACAAGAC
ATCTACAACACATAGTGTGACATTAGAAAAATACCTGAGTTGCCAAAAAAGGGCCACTTAAAGA
GTAATGGTCCCAGAAGTGCGACAACTAAAGACAGGACCACAACAACTCTGCTATAGTGCTCTCC
AAACTCATCTAGCCATCTTTGCAATTTGGGCTTGTTTAGCTGGCCTTCTTCTGTCAACTGGACG
ATTCTGTTGAGTGTTGAATCCTCCCACGACTTGGTGAC
						
					

			
		

Sequences
Splice junction sequence	ACTCATCTAGCCATCTTTGCAATTTGGGCTTGTTTAGCTGGCCTTCTTCTGTCAACTGGACGAT TCTGTTGAGTGTTGAATCCTCCCACGACTTGGTGACcgtcaaccaaagaggaagaaatcccaaa acagaaggaagtgccgcaaaaacaatacaagacaatgcaagagctacactttgcttgacctgtg aggatgaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1314 Transcript exons: 28790115-28790201,28790296-28790483,28791621-28791837,28 792446-28792610,28792798-28792903,28793483-28793724,2879 4146-28794258,28794501-28794696 CGTCAACCAAAGAGGAAGAAATCCCAAAACAGAAGGAAGTGCCGCAAAAACAATACAAGACAAT GCAAGAGCTACACTTTGCTTGACCAAAGAAGTTGTTTGACGAGCTTTAGCTATACAAAATGGCA CCCCACATATATTATCCTGCAACAAAAGAACATCTGCAACAGCCACCGCTGTTGCACTGGCACG CTGGGCTAGAACTATACCAACCGTTGCAGCTGCAAGAGCTGGTGCATCATTTATGCCATCACCA ACCATTATTAGACCTCCACCTCCCTCCCTTGAAACTGCTTTTACTTTATTCAACTTGTCCTCTG GCTTTAAACAGCAGTGAACTTCGTCGATACAAACAGCTTTAGCAACTCTTAGAGCACTTGATTC ATGATCTCCCGTAAGCATCATGATGCGAAGTTTAGCCTTGTCTCTTAAGGTAGATATAACTTCA CATACACCAGAACGGGGTTCATCCTCAAAGTGAAAAAGGGTGACCTTTTTATCCACTGTTAGAG CAGCCTGGACAAATTCAGGCCCAAATGCAGAAGCTTTTACAGCCTCTTTTATCTGCTCAGATTC ACCACTGGATCTGTATAGCGAAGAAATGTATTCCACAGAACCAATTGATGCCTTAGAAAGTTCA TCTTCATTGTTTCCAGCCTTTACACCGCTCAAAGTAGCAACAACTCCTCTACCAGGTAAGCACT CAAAGCTTTCTACAGCAACCAGTGGGAGGTCCTTCCCAACAGAATGATCTAAAACTGCCCTTCC AATAGGATGAGTTGTTCCCTTCTCCATAGCTGCAGCAACAGCTAGAGCTTCACTTTCACAGTTA GGAGTACAACAAGCCTGATCACTAAAATCATTTGTCACATCTGAATGCCCATGAATGGGTTCGA TAGCTTTGCACATGAGCTTCCCTGTTGTTAATGTTCCTGTCTTGTCAAAAGCAATAGACTGACA AGCAGAAAGAGCATCCAGCACATGTCCGCCTTTCAACAAAATTCCCTTGCTTGCAAGAGAACTG ATCGCAGTTGCATATGCTAATGGAGCTACAGCCAATGCACATGGAGATGCAGCAACCATAAGTC CTAGCCCACGGTAAATTGAGCCCCTACAAACTGAGTTGCCAAAAAAGGGCCACTTAAAGAGTAA TGGTCCCAGAAGTGCGACAACTAAAGACAGGACCACAACAACTCTGCTATAGTGCTCTCCAAAC TCATCTAGCCATCTTTGCAATTTGGGCTTGTTTAGCTGGCCTTCTTCTGTCAACTGGACGATTC TGTTGAGTGTTGAATCCTCCCACGACTTGGTGAC
Genomic sequence	CGTCAACCAAAGAGGAAGAAATCCCAAAACAGAAGGAAGTGCCGCAAAAACAATACAAGACAAT GCAAGAGCTACACTTTGCTTGACCTGTGAGGATGAATCACAAAGTATAAGAACCAGTAATATAT ATTGTATCTATAGTTAGAAATGTTTTAGAATGAAGCCTCCCAAGAAACAATACCAAAGAAGTTG TTTGACGAGCTTTAGCTATACAAAATGGCACCCCACATATATTATCCTGCAACAAAAGAACATC TGCAACAGCCACCGCTGTTGCACTGGCACGCTGGGCTAGAACTATACCAACCGTTGCAGCTGCA AGAGCTGGTGCATCATTTATGCCATCACCAACCATTATTAGACCTCCACCTGTAATCATGTATA CATGAATCATAACCAGGAAGTGAAAAAAAAAATAATTCCCTCCAAATAATGAAATGAATACCAC AAGAGGTAATATATGGCTGTAAGTCAAAAATTCTGATGGATACACAGTTCAGCTGATCCAAAGT ACGACCACAGAAAGCTTCGAATATTTAATTCTTTAATTATACATGAAGAATGTTTAGTTATGGA CTTCTATAGACATTTCTGTGGTTGCAGCTGACAGGTTATATCTACATGCAAATAATAACAGATA ACTATTGGAATCAATTGATCAAGTCATGCAGCAAGAAGGGATGGGGATTAAGCAGAATGTAGCC AGTACAATTAGACTGTGTTCGTAAGTTCACATTCCCAACCTCCGCTTCCTTGTTTCCCGCGCAC ATGCTTTCTGAACTACTAAGCGGTATTTTTTTTTTTTGCAAAAATCTATAGAAAAGTTGCTGTA AAAATCATATTAATCCATTTATGAGTTTTTTAGTAATATTTAATTAATCATGTGCTAATAAGCA ACCCCGGTTTCCATGCAGTGGTGAACAGAGAATCAAAATTTGGAGTGGGCTAGTGAAAATTAGC ACAAAACTATCGATTTATGTATATGTTTCTTATATGTGTTTGCCACCATGTTATCATGATTAAA ACGTGCTTTATTGGTTGATTCATACTATCATTAGTATAGGGAATACTGCTAGTAAAAAAGAAAA TAATATGCAGTGCAGCTTGCGTGTGCCTGATTTGCCAGCCTCAAATTTAGAGGCCAGTGTCCAC GGCTCCATGCACACGGCGAAGTATAGCGGATTGGTGGACTCTTGCCTGCCGCACATGAGCTACA AGTTTGCCAAGATCATGACAGCTGGAGGCGCTAACTAGCAGGAGCACATGCAGCGGGGTGCGTG GCAGTAGGGGCCTAGGGTGTACCCGAGCCCACTCTGCACCCCCCCCCCCCCCGGCGCGGGTTGT GTCCACCCCTGTTTCCGTGCACGGGCCTCCCGAACACAGCCTTTTAAGTGGTCAGCATCTAAAG TACATGTGTTCATAATTAAGTAACAACTGAAAAACTAGCAAAAATACCGTCATATAACCATTTA ACTGAAAATTTGCAGTCATAAGATATCGACCTACCTCCCTCCCTTGAAACTGCTTTTACTTTAT TCAACTTGTCCTCTGGCTTTAAACAGCAGTGAACTTCGTCGATACAAACAGCTTTAGCAACTCT TAGAGCACTTGATTCATGATCTCCCGTAAGCATCATGATGCGAAGTTTAGCCTTGTCTCTTAAG GTAGATATAACTTCACATACACCAGAACGGGGTTCATCCTCAAAGTGAAAAAGGGTGACCTGAA ATGAATTTTTCATCAGCAGATGGACAATGCATGGCAGAGTACTTATGAAATAACCTAAATGGTG ATAAAAAAAATGCAAACGGTTCATCTGCAAGGAAACTGAGCATGAAAGTGTGAACGGAAGTGAC ATTAGATAATAACAGTCTGTATTTCCATGTTACATGACCAAGATATTTGAACTTGTATGCAGCA ATAAAGACTAGCAGCACCTCCTGGTTGTCTATTAAAATTTAATTTTACTCCTGTTGCATTTCAT GATTGATCTCCTAGCCACTTTGATACCAACTGAAATATATCACTTTCTATAAAAAAAATGCATA TTACAATTTACAGTCAGCAAACATATGAACATTTGGTTTTTAATCTCAGATTCACTCGAAAGAA AAAAAAAAAAGGCAAACCATCTGAACTTGATAGGCTGAAGGCATATCCACCTTAGCTCCTAAAC TACCATGTTGAATTACTTTAGCATTTATGCAATTATATAATACACCTATATTTACAGCAGACAT CTGGACAGATTACTGTGGAACAATATAAAAATAATTTTAGAAAGGGAGAAGTATGCTGACAAAT GAGAAGATTGTAATGTAATTAACTCACCTTTTTATCCACTGTTAGAGCAGCCTGGACAAATTCA GGCCCAAATGCAGAAGCTTTTACAGCCTCTTTTATCTGCTCAGATTCACCACTGGATCTGTATA GCGAAGAAATGTATTCCACAGAACCAATTGATGCCTTAGAAAGTTCATCTTCATTGTTTCCAGC CTGTAACACATATATGAGGTATCAAGCTAACATACTAAAGATCAATCTTCTCAATAATTTGTAT TTAAAAAACAAATTCTAGTGCTGTTTGTTTTCAAATCTATGAAACTACATTGCATTACATGACC CTTTTTTATGTCCAATTTTCAAGATAACCAAGCTGATTGGAATATACTATATAATCTACCTTTA CACCGCTCAAAGTAGCAACAACTCCTCTACCAGGTAAGCACTCAAAGCTTTCTACAGCAACCAG TGGGAGGTCCTTCCCAACAGAATGATCTAAAACTGCCCTGTGAATAATGCAATCAGGATGTGAG TTAGTATGTCAGATTATCCATCATTCTACAAAATTCATAACATACATTAGAAAAATGAAAAACA GAATCATACAGTGGCCTAAGAATCTCAACATAATTCTTAAAATAGTGGCAAAAAAAAAATTGGT CTCAACCTAGCAAACCTGATTTCAAATAAGTTGTGGCATCAGACTTCAGGCATAGGCCTAGCGT TGAAAAAGAAGTTGACAATTTAATCAAGCTGATCTGAAGTAAGCATATCTCAGGTTGATAGATA CAATGAATTAGGTACTGGTTAAATAGCACTAAGGACGTTATCAAAAAAATAGCACTAAGGACCA CTATGACTTTGGTCAAACTTCAAAGACCATTTGTATGAGCACAAAGTGTTGGCAAATACTTCAT GCCAATGTTATGGCATCAAAAGAGGTCAACTAGTGATGAACCATGGTATTATTACAATTAGCAT GCAAAATTAAATATATACTACTACATGACTTCATCATCTAGCGTAAATAAAAAAAATCAAATAA GCAAAAAGACAGACAATGAGAATTTTGTCCATGCTCTCACCTTCCAATAGGATGAGTTGTTCCC TTCTCCATAGCTGCAGCAACAGCTAGAGCTTCACTTTCACAGTTAGGAGTACAACAAGCCTGAT CACTAAAATCATTTGTCACATCTGAATGCCCATGAATGGGTTCGATAGCTTTGCACATGAGCTT CCCTGTTGTTAATGTTCCTGTCTTGTCAAAAGCAATAGACTGACAAGCAGAAAGAGCATCCAGC ACATGTCCGCCTTTCAACAAAATTCCCTACAGATCACCCCCAAAGAAAGGTTTGTGAACAATTT TACTATGCAGAAGACTCTTGGAGAAGGTCATCAGACATGCCATATTGAACTAAAAAATATTTTG GCGAAAACTGCTAACATAACATGGTTTCATAGCATGCACTTAAAGCAACAATGGCTATCTTCCT GCTATTGGTTACAATGCAGCAATAATCATTTCAAGAAATGATTCCAATTAATATCCCCTGATCT CTTCTAAGATTTGTGCACATAACTCTAGTATAGATAATGCAAAGGAAAAGAAGCAGCCTAGTAG ACTAATAAAATTCCGAATAAAAATACCAGATTCTTCATGTAATTTAGTAATTGAGTAAGCTTTC TCTTGCATGGAAAGAAGAAAAATGGCCAGTAGAACTCAAACGATGGAAACTTTCAAACAATACC TTGCTTGCAAGAGAACTGATCGCAGTTGCATATGCTAATGGAGCTACAGCCAATGCACATGGAG ATGCAGCAACCATAAGTCCTAGCCCACGGTAAATTGAGCCCCTACAAACTAAAGAAAATGTCAG TGCACAGAAAGCTTGATCATATAGTCAAATCAATCAGTTCAGTGCAAATTGCATGATCATCAAA CTTCTTTCTCCTACAATTAAACATATTGGTTCAGTACCCAGATCATTAAGAATAGCTCCCACCT AAAGCATATTCTACAATTATCAAAGGACCTAGTCAGATTTGATCAATTATATCTGTGACAAGAC ATCTACAACACATAGTGTGACATTAGAAAAATACCTGAGTTGCCAAAAAAGGGCCACTTAAAGA GTAATGGTCCCAGAAGTGCGACAACTAAAGACAGGACCACAACAACTCTGCTATAGTGCTCTCC AAACTCATCTAGCCATCTTTGCAATTTGGGCTTGTTTAGCTGGCCTTCTTCTGTCAACTGGACG ATTCTGTTGAGTGTTGAATCCTCCCACGACTTGGTGAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.208299767

Conservation Information
Conserved circRNAs	NA
PMCS	0.208299767

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							28794225-28790117(-)
						
					

						Potential amino acid sequence
						
							MVAASPCALAVAPLAYATAISSLASKGILLKGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIE
PIHGHSDVTNDFSDQACCTPNCESEALAVAAAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFEC
LPGRGVVATLSGVKAGNNEDELSKASIGSVEYISSLYRSSGESEQIKEAVKASAFGPEFVQAAL
TVDKKVTLFHFEDEPRSGVCEVISTLRDKAKLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPE
DKLNKVKAVSREGGGGLIMVGDGINDAPALAAATVGIVLAQRASATAVAVADVLLLQDNICGVP
FCIAKARQTTSLVKQSVALALSCIVFAALPSVLGFLPLWLTVTKSWEDSTLNRIVQLTEEGQLN
KPKLQRWLDEFGEHYSRVVVVLSLVVALLGPLLFKWPFFGNSVCRGSIYRGLGLMVAASPCALA
VAPLAYATAISSLASKGILLKGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIEPIHGHSDVTN
DFSDQACCTPNCESEALAVAAAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFECLPGRGVVATL
SGVKAGNNEDELSKASIGSVEYISSLYRSSGESEQIKEAVKASAFGPEFVQAALTVDKKVTLFH
FEDEPRSGVCEVISTLRDKAKLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPEDKLNKVKAVS
REGGGGLIMVGDGINDAPALAAATVGIVLAQRASATAVAVADVLLLQDNICGVPFCIAKARQTT
SLVKQSVALALSCIVFAALPSVLGFLPLWLTVTKSWEDSTLNRIVQLTEEGQLNKPKLQRWLDE
FGEHYSRVVVVLSLVVALLGPLLFKWPFFGNSVCRGSIYRGLGLMVAASPCALAVAPLAYATAI
SSLASKGILLKGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIEPIHGHSDVTNDFSDQACCTP
NCESEALAVAAAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFECLPGRGVVATLSGVKAGNNED
ELSKASIGSVEYISSLYRSSGESEQIKEAVKASAFGPEFVQAALTVDKKVTLFHFEDEPRSGVC
EVISTLRDKAKLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPEDKLNKVKAVSREGGGGLIMV
GDGINDAPALAAATVGIVLAQRASATAVAVADVLLLQDNICGVPFCIAKARQTTSLVKQSVALA
LSCIVFAALPSVLGFLPLWLTVTKSWEDSTLNRIVQLTEEGQLNKPKLQRWLDEFGEHYSRVVV
VLSLVVALLGPLLFKWPFFGNSVCRGSIYRGLGLMVAASPCALAVAPLAYATAISSLASKGILL
KGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIEPIHGHSDVTNDFSDQACCTPNCESEALAVA
AAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFECLPGRGVVATLSGVKAGNNEDELSKASIGSV
EYISSLYRSSGESEQIKEAVKASAFGPEFVQAALTVDKKVTLFHFEDEPRSGVCEVISTLRDKA
KLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPEDKLNKVKAVSREGGGGLIMVGDGINDAPAL
AAATVGIVLAQRASATAVAVADVLLLQDNICGVPFCIAKARQTTSLVKQSVALALSCIVFAALP
SVLGFLPLWLT(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	28794225-28790117(-)
Potential amino acid sequence	MVAASPCALAVAPLAYATAISSLASKGILLKGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIE PIHGHSDVTNDFSDQACCTPNCESEALAVAAAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFEC LPGRGVVATLSGVKAGNNEDELSKASIGSVEYISSLYRSSGESEQIKEAVKASAFGPEFVQAAL TVDKKVTLFHFEDEPRSGVCEVISTLRDKAKLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPE DKLNKVKAVSREGGGGLIMVGDGINDAPALAAATVGIVLAQRASATAVAVADVLLLQDNICGVP FCIAKARQTTSLVKQSVALALSCIVFAALPSVLGFLPLWLTVTKSWEDSTLNRIVQLTEEGQLN KPKLQRWLDEFGEHYSRVVVVLSLVVALLGPLLFKWPFFGNSVCRGSIYRGLGLMVAASPCALA VAPLAYATAISSLASKGILLKGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIEPIHGHSDVTN DFSDQACCTPNCESEALAVAAAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFECLPGRGVVATL SGVKAGNNEDELSKASIGSVEYISSLYRSSGESEQIKEAVKASAFGPEFVQAALTVDKKVTLFH FEDEPRSGVCEVISTLRDKAKLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPEDKLNKVKAVS REGGGGLIMVGDGINDAPALAAATVGIVLAQRASATAVAVADVLLLQDNICGVPFCIAKARQTT SLVKQSVALALSCIVFAALPSVLGFLPLWLTVTKSWEDSTLNRIVQLTEEGQLNKPKLQRWLDE FGEHYSRVVVVLSLVVALLGPLLFKWPFFGNSVCRGSIYRGLGLMVAASPCALAVAPLAYATAI SSLASKGILLKGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIEPIHGHSDVTNDFSDQACCTP NCESEALAVAAAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFECLPGRGVVATLSGVKAGNNED ELSKASIGSVEYISSLYRSSGESEQIKEAVKASAFGPEFVQAALTVDKKVTLFHFEDEPRSGVC EVISTLRDKAKLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPEDKLNKVKAVSREGGGGLIMV GDGINDAPALAAATVGIVLAQRASATAVAVADVLLLQDNICGVPFCIAKARQTTSLVKQSVALA LSCIVFAALPSVLGFLPLWLTVTKSWEDSTLNRIVQLTEEGQLNKPKLQRWLDEFGEHYSRVVV VLSLVVALLGPLLFKWPFFGNSVCRGSIYRGLGLMVAASPCALAVAPLAYATAISSLASKGILL KGGHVLDALSACQSIAFDKTGTLTTGKLMCKAIEPIHGHSDVTNDFSDQACCTPNCESEALAVA AAMEKGTTHPIGRAVLDHSVGKDLPLVAVESFECLPGRGVVATLSGVKAGNNEDELSKASIGSV EYISSLYRSSGESEQIKEAVKASAFGPEFVQAALTVDKKVTLFHFEDEPRSGVCEVISTLRDKA KLRIMMLTGDHESSALRVAKAVCIDEVHCCLKPEDKLNKVKAVSREGGGGLIMVGDGINDAPAL AAATVGIVLAQRASATAVAVADVLLLQDNICGVPFCIAKARQTTSLVKQSVALALSCIVFAALP SVLGFLPLWLT(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os06g0690700_circ_g.1

Address

Any questions?

Supported by