Plant Circular RNA Database

Detail information of Os03g0858100_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os03g0858100_circ_g.5
					
						ID in PlantcircBase
						osa_circ_022807
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 36218661-36222368  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, KNIFE, PcircRNA_finder
					
						Parent gene
						
							Os03g0858100						
					
						Parent gene annotation
						
							Similar to CRM1 protein (Fragment). (Os03t0858100-01);Similar to
 predicted protein. (Os03t0858100-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os03g0858100_circ_g.4 Os03g0858100_circ_g.6 Os03g0858100_circ_g.7 						
					
						Support reads
						2
					
						Tissues
						seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0858100-01:13

General Information
CircRNA Name	Os03g0858100_circ_g.5
ID in PlantcircBase	osa_circ_022807
Alias	NA
Organism	Oryza sativa
Position	chr3: 36218661-36222368 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, KNIFE, PcircRNA_finder
Parent gene	Os03g0858100
Parent gene annotation	Similar to CRM1 protein (Fragment). (Os03t0858100-01);Similar to predicted protein. (Os03t0858100-02)
Parent gene strand	-
Alternative splicing	Os03g0858100_circ_g.4 Os03g0858100_circ_g.6 Os03g0858100_circ_g.7
Support reads	2
Tissues	seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0858100-01:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGTGTTCAAGTTGTGAGAATTCTGCAGAATGTGGACCACCTGCAGCCACATATCTGGATTATT
CTGTAGATCCCGTAGTATCTGATCAGCGGCATTCCTcttatactggacaagaacatcgttgtct
ttcattgtttcacgtacaatattcccattttcatcttccacaatcagtacctcctctggttttg
ccatccga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTATACTGGACAAGAACATCGTTGTCTTTCATTGTTTCACGTACAATATTCCCATTTTCATCT
TCCACAATCAGTACCTCCTCTGGTTTTGCCATCCGACAAATCATCAACATTCGTAATTTTGATA
GTGGGCCTGAGTAAAGCTGACGCCTCTGCTGAACAGCTGTGATGGTGCCATCAACTCCAGGGAG
CATCTGAGCCTACAGATTATTCATATGTGCGATGAGTCGACGATGTAGAAGAGTGCAGCACTTC
AAAACAAGAAATAACAAGTGAAATAGAAGGAAAAGTTTGCAAAAAGTGCATGAATTGCAAAGGT
GAATATATCAAAGCCATTGAATTCATGTAAAAAATTCATAGAGGAACACCTGAAGTCCCATCAT
GTTTACAGATGCTGCAGGCTCCATTTGATTGTGTGCTTCAAATAGCTCTAAAACAAACACATTC
CAGTAATCCAAACACACCTGCAAATCGGCCAAAATTATAAGATATGCATCTCTCTTGAACCATT
CATATATGTACCGAATCTAGCTATAAATTACTTACCTTAAAAACCTCTGTGTCATCAACATATG
AAATTCCAATGAGGTACTCAAGGCCCAGAAGTAATGCAGCTCTATTTTCTGGAGATGCCTCCAA
TATGCGCATGTGATTCTAAATGTATCACCAAATAAAGAGATCAGAGCATATTGAAACTAAATCA
TGATTTCGTACGGCGTAACTAACATTTATGTTATTTTTTCAGTGTATAAATTGACAAGGCCAAT
ACAAGAACAAATCAGCTTTTTTTGTCACAACTGGGAATATGACATCAAAAGAGTAGGTTAATTA
GTTACAGCATCTCAAAGAAAGTTTCATATATTTTAAGTGTGCAATTTTATTATCTCAAAAAATA
AGATAGTTAGGCATACAGAGAATGTGAGAAATCCTACCTTGAAGAAAGAAGTGAAAAAAAGAGC
TAGATTTTGTATGAATGCCTGCACCAAGGAAAATACATTTTATTAATACAGTACCTCAATGGTA
TTTAAAAAATGAGAAATCAACCAGACTCCTATGACTGACTGTTATTGAAGTAATCACTGCCATA
CCTGTTCTTCACTGGAGCCATTAGCATAAGCATCAGGAATTGTTCCAGGAGGAAGAATAGCCTA
TACATGTTATGGAAGGGTCGTTCATAAGTACATATTTAAAAGGAGGGGGAAAGGGCGAGGATAC
TTTAGAAAGAAGGAAGCAACAGATTCCTGAAGACATTCTTTACCTGCAACTGCATCATGAAAAT
CGTATACATCTTCACATACTGCACATTATAAAAATCACCAAACTGAAGAGCAGCGACCTGCAAG
ATCCATATATACAAAAGATAAATAGGGTATTAAACCAACAAGGTTACATGTTTCTCAAATGCAA
TAGGGCTGGTTTACTGCCCCCATTCAAAAAGGATATATAGAAAAAAAAAACTGAACCAAACTAA
TGGATATGGTCCATTTTTTATTACTCCATTAGGAACATACGCAGTTAGAAACATTGCTAATTAG
ACACAGCAGGAAATACATCACCAATTTACCTCTGTAAGGCACTGGAGTGTAAGGTTCCGATAAG
CAGCCATAGGAAAGAACTTCAGTAATGTCTCCAGCTAACAAACATATATGAAGAAAAATAAGAC
ATGATTTGATAAATTCTATGTAGGATCTTTCCTGATAAGTTTAGAAATAAGCTACATACCAAAG
GTGACTCAAATATGAAGCCCACTGGTATCCATGATAAGAAAGCATGAAGTGTAGCCAGTGTAGC
ACGGATGAGCTCAGGTCTTTGTGTTGCAGATAGGACATATAAACATAGCTCATGAATAAGACGA
AATTCACTGTTCAACAATAAGGAAAATAATGTTGCATCAGTTCAAAAGGCAGTCGCAATAAAGT
ATATGTCAAAATAATTGACTGTGGTCTAATATATATAGATACAGAACACCCTAAAAGGACAAAG
ATGGTAACAAGAACCAACCTGTTAAGTGATGACTTCAGTTCTTTAATCTTCTGTTGTGTCATTT
CACCTCTTGAAAAATCAAAAATTTCTTCGCTTAAAAGCTGCAAATCGCAGAGTCAGTAGTTGGT
TCCATGTTGTTAAACAGAAACAGGTGATAACTCAACTTGCCTTCAATATAGCCATGCAATTTTC
GCATATGGTTTCACTACTCTTTGCAGCAGCAACAAGGTCAGGAACGAAAGATGACCACCTAGCT
GGCCACTCATGCTTCAGAACCTATTATATTGCAACAATTAATAATACAAGTCAGTTGACTTGCC
AGATGAACAAATAGATAATAACAAGCAGTGCTATGACTTAAAAGGTGACTGAAACAGTACAGCT
TACCTGCACCAGTATAATGTTGAGTTTATTAACATAAAGTCTCTCTTGCCGAAAAGAAGCCTCA
TTACTGGAGAGCTGATAGAGTGACGAAAGAGAACATAAAAGGCATACACGAATGAGATTTGTTT
TCATGGGCCAGATGAAATAAAAGATTTGTCAAATGTATTGGTCCTTACCTGGACAATAACATCA
GATATGTAATTCTTGATGCCATCACGTTGTTCAGTTGGCAATGCATTCCACCTATACTTTATAA
CACTTTCAAGTACCTAAAATGTGTAGCAAAATCAGGAAATGACACAGAATGAACTTCGCAGCTA
CAAGTGAAGATGTAGCACTAGCATGCATGCACAGAGACATCCCAGGTTGGGATCTCCTAATTTA
AAATGAACATGGAGCAAGCATCAGCATCATGTTGAAACTAGCTTGTAGATGCAGAAAACCCAGG
TTTTATTTATGGCTGATGCACATAACTATGGGTTGCATGATCATACCATATGGCCCCTAAACAA
TTTCTGTGGTTCTGCCAAAAAGAGAAGGGTGATGATGGAGTCATGGCAAAAAAAGAGATGAGCC
TTATTTGAATAGTGAAAGAGATTAGAGATTCTGAAGTGGCAAAAGAGAAGCTCTTTTTATTCTG
TTGGTGAAACAATAGAACCAACATGTCACCTTTCACTGCTCTAAATAGAGGCCATTATAAACCA
TGTTTCTCCAGCATGTTAAAAAATAAGCATAGCACAAAAACTGCAAACTGATATTTAGAAACTT
AGGTCTCCATCTATTTCTGTAAAAAAGGAAGCATCCACTTTTACTGTAAACAGGGTTCTGTACA
AACTTCATGCTACCATCCTGCATTTAAATTTTTTAAGCATGGCCTATGTATGTATTCAATCTAG
CCTATGCGCTAGGCCTGCGAAGGCAAATAAGCAACATGTGTTTCTCCTAGGGTTGATTCGTCTC
TATAATGTGGTAGTACATAAGTGATAAAACACTCAACACTGTTGAACAATCTGAATGCTCAAAT
ATAGGATATGGTGACTATGAGAACCTCTCCTAACACAGTTACACTACAATCATATAAGCAAACG
TGTAATGTAAAGTGCAGGTATTACGGGATGAAAAAATATCTTACTACAATGCTAATCATTAAGA
GAAATGGCAGCCATCTTTATTGAGTTGCAAAGAAACCTAACATGGCTAACTAGTGAGGTGCGGA
AACTTACTTGGAGGGCAAAGAACTTGGTGTTCAAGTTGTGAGAATTCTGCAGAATGTGGACCAC
CTGCAGCCACATATCTGGATTATTCTGTAGATCCCGTAGTATCTGATCAGCGGCATTCCT
						
					

			
		

Sequences
Splice junction sequence	TGGTGTTCAAGTTGTGAGAATTCTGCAGAATGTGGACCACCTGCAGCCACATATCTGGATTATT CTGTAGATCCCGTAGTATCTGATCAGCGGCATTCCTcttatactggacaagaacatcgttgtct ttcattgtttcacgtacaatattcccattttcatcttccacaatcagtacctcctctggttttg ccatccga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTATACTGGACAAGAACATCGTTGTCTTTCATTGTTTCACGTACAATATTCCCATTTTCATCT TCCACAATCAGTACCTCCTCTGGTTTTGCCATCCGACAAATCATCAACATTCGTAATTTTGATA GTGGGCCTGAGTAAAGCTGACGCCTCTGCTGAACAGCTGTGATGGTGCCATCAACTCCAGGGAG CATCTGAGCCTACAGATTATTCATATGTGCGATGAGTCGACGATGTAGAAGAGTGCAGCACTTC AAAACAAGAAATAACAAGTGAAATAGAAGGAAAAGTTTGCAAAAAGTGCATGAATTGCAAAGGT GAATATATCAAAGCCATTGAATTCATGTAAAAAATTCATAGAGGAACACCTGAAGTCCCATCAT GTTTACAGATGCTGCAGGCTCCATTTGATTGTGTGCTTCAAATAGCTCTAAAACAAACACATTC CAGTAATCCAAACACACCTGCAAATCGGCCAAAATTATAAGATATGCATCTCTCTTGAACCATT CATATATGTACCGAATCTAGCTATAAATTACTTACCTTAAAAACCTCTGTGTCATCAACATATG AAATTCCAATGAGGTACTCAAGGCCCAGAAGTAATGCAGCTCTATTTTCTGGAGATGCCTCCAA TATGCGCATGTGATTCTAAATGTATCACCAAATAAAGAGATCAGAGCATATTGAAACTAAATCA TGATTTCGTACGGCGTAACTAACATTTATGTTATTTTTTCAGTGTATAAATTGACAAGGCCAAT ACAAGAACAAATCAGCTTTTTTTGTCACAACTGGGAATATGACATCAAAAGAGTAGGTTAATTA GTTACAGCATCTCAAAGAAAGTTTCATATATTTTAAGTGTGCAATTTTATTATCTCAAAAAATA AGATAGTTAGGCATACAGAGAATGTGAGAAATCCTACCTTGAAGAAAGAAGTGAAAAAAAGAGC TAGATTTTGTATGAATGCCTGCACCAAGGAAAATACATTTTATTAATACAGTACCTCAATGGTA TTTAAAAAATGAGAAATCAACCAGACTCCTATGACTGACTGTTATTGAAGTAATCACTGCCATA CCTGTTCTTCACTGGAGCCATTAGCATAAGCATCAGGAATTGTTCCAGGAGGAAGAATAGCCTA TACATGTTATGGAAGGGTCGTTCATAAGTACATATTTAAAAGGAGGGGGAAAGGGCGAGGATAC TTTAGAAAGAAGGAAGCAACAGATTCCTGAAGACATTCTTTACCTGCAACTGCATCATGAAAAT CGTATACATCTTCACATACTGCACATTATAAAAATCACCAAACTGAAGAGCAGCGACCTGCAAG ATCCATATATACAAAAGATAAATAGGGTATTAAACCAACAAGGTTACATGTTTCTCAAATGCAA TAGGGCTGGTTTACTGCCCCCATTCAAAAAGGATATATAGAAAAAAAAAACTGAACCAAACTAA TGGATATGGTCCATTTTTTATTACTCCATTAGGAACATACGCAGTTAGAAACATTGCTAATTAG ACACAGCAGGAAATACATCACCAATTTACCTCTGTAAGGCACTGGAGTGTAAGGTTCCGATAAG CAGCCATAGGAAAGAACTTCAGTAATGTCTCCAGCTAACAAACATATATGAAGAAAAATAAGAC ATGATTTGATAAATTCTATGTAGGATCTTTCCTGATAAGTTTAGAAATAAGCTACATACCAAAG GTGACTCAAATATGAAGCCCACTGGTATCCATGATAAGAAAGCATGAAGTGTAGCCAGTGTAGC ACGGATGAGCTCAGGTCTTTGTGTTGCAGATAGGACATATAAACATAGCTCATGAATAAGACGA AATTCACTGTTCAACAATAAGGAAAATAATGTTGCATCAGTTCAAAAGGCAGTCGCAATAAAGT ATATGTCAAAATAATTGACTGTGGTCTAATATATATAGATACAGAACACCCTAAAAGGACAAAG ATGGTAACAAGAACCAACCTGTTAAGTGATGACTTCAGTTCTTTAATCTTCTGTTGTGTCATTT CACCTCTTGAAAAATCAAAAATTTCTTCGCTTAAAAGCTGCAAATCGCAGAGTCAGTAGTTGGT TCCATGTTGTTAAACAGAAACAGGTGATAACTCAACTTGCCTTCAATATAGCCATGCAATTTTC GCATATGGTTTCACTACTCTTTGCAGCAGCAACAAGGTCAGGAACGAAAGATGACCACCTAGCT GGCCACTCATGCTTCAGAACCTATTATATTGCAACAATTAATAATACAAGTCAGTTGACTTGCC AGATGAACAAATAGATAATAACAAGCAGTGCTATGACTTAAAAGGTGACTGAAACAGTACAGCT TACCTGCACCAGTATAATGTTGAGTTTATTAACATAAAGTCTCTCTTGCCGAAAAGAAGCCTCA TTACTGGAGAGCTGATAGAGTGACGAAAGAGAACATAAAAGGCATACACGAATGAGATTTGTTT TCATGGGCCAGATGAAATAAAAGATTTGTCAAATGTATTGGTCCTTACCTGGACAATAACATCA GATATGTAATTCTTGATGCCATCACGTTGTTCAGTTGGCAATGCATTCCACCTATACTTTATAA CACTTTCAAGTACCTAAAATGTGTAGCAAAATCAGGAAATGACACAGAATGAACTTCGCAGCTA CAAGTGAAGATGTAGCACTAGCATGCATGCACAGAGACATCCCAGGTTGGGATCTCCTAATTTA AAATGAACATGGAGCAAGCATCAGCATCATGTTGAAACTAGCTTGTAGATGCAGAAAACCCAGG TTTTATTTATGGCTGATGCACATAACTATGGGTTGCATGATCATACCATATGGCCCCTAAACAA TTTCTGTGGTTCTGCCAAAAAGAGAAGGGTGATGATGGAGTCATGGCAAAAAAAGAGATGAGCC TTATTTGAATAGTGAAAGAGATTAGAGATTCTGAAGTGGCAAAAGAGAAGCTCTTTTTATTCTG TTGGTGAAACAATAGAACCAACATGTCACCTTTCACTGCTCTAAATAGAGGCCATTATAAACCA TGTTTCTCCAGCATGTTAAAAAATAAGCATAGCACAAAAACTGCAAACTGATATTTAGAAACTT AGGTCTCCATCTATTTCTGTAAAAAAGGAAGCATCCACTTTTACTGTAAACAGGGTTCTGTACA AACTTCATGCTACCATCCTGCATTTAAATTTTTTAAGCATGGCCTATGTATGTATTCAATCTAG CCTATGCGCTAGGCCTGCGAAGGCAAATAAGCAACATGTGTTTCTCCTAGGGTTGATTCGTCTC TATAATGTGGTAGTACATAAGTGATAAAACACTCAACACTGTTGAACAATCTGAATGCTCAAAT ATAGGATATGGTGACTATGAGAACCTCTCCTAACACAGTTACACTACAATCATATAAGCAAACG TGTAATGTAAAGTGCAGGTATTACGGGATGAAAAAATATCTTACTACAATGCTAATCATTAAGA GAAATGGCAGCCATCTTTATTGAGTTGCAAAGAAACCTAACATGGCTAACTAGTGAGGTGCGGA AACTTACTTGGAGGGCAAAGAACTTGGTGTTCAAGTTGTGAGAATTCTGCAGAATGTGGACCAC CTGCAGCCACATATCTGGATTATTCTGTAGATCCCGTAGTATCTGATCAGCGGCATTCCT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.223252137

Conservation Information
Conserved circRNAs	NA
PMCS	0.223252137

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							36222322-36218663(-)
36218682-36222277(-)
						
					

						Potential amino acid sequence
						
							MWLQVVHILQNSHNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQ
ERLYVNKLNIILVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEM
TQQKIKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANGSSEE
QAFIQNLALFFTSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVCLDYWNVFVLE
LFEAHNQMEPAASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRMLMICRMAKPEEVLI
VEDENGNIVRETMKDNDVLVQYKRNAADQILRDLQNNPDMWLQVVHILQNSHNLNTKFFALQVL
ESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKLNIILVQVLKHEWPARWS
SFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQKIKELKSSLNSEFRLIHELCLY
VLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETLLKFFPMAAYRNLTLQCLTEVAALQF
GDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANGSSEEQAFIQNLALFFTSFFKNHMRILEAS
PENRAALLLGLEYLIGISYVDDTEVFKVCLDYWNVFVLELFEAHNQMEPAASVNMMGLQAQMLP
GVDGTITAVQQRRQLYSGPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKRN
AADQILRDLQNNPDMWLQVVHILQNSHNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISD
VIVQLSSNEASFRQERLYVNKLNIILVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILK
LLSEEIFDFSRGEMTQQKIKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWI
PVGFIFESPLLETLLKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPP
GTIPDAYANGSSEEQAFIQNLALFFTSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEV
FKVCLDYWNVFVLELFEAHNQMEPAASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRM
LMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKRNAADQILRDLQNNPDMWLQVVHILQN
SHNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKLNII
LVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQKIKELKSS
LNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETLLKFFPMAAYRN
LTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANGSSEEQAFIQNLALFF
TSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVCLDYWNVFVLELFEAHNQMEPA
ASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRMLMICRMAKPEEVLIVEDENGNIVRE
TMKDNDVLVQYK(-)
MFLSSIRGMPLIRYYGIYRIIQICGCRWSTFCRILTT*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	36222322-36218663(-) 36218682-36222277(-)
Potential amino acid sequence	MWLQVVHILQNSHNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQ ERLYVNKLNIILVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEM TQQKIKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETL LKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANGSSEE QAFIQNLALFFTSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVCLDYWNVFVLE LFEAHNQMEPAASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRMLMICRMAKPEEVLI VEDENGNIVRETMKDNDVLVQYKRNAADQILRDLQNNPDMWLQVVHILQNSHNLNTKFFALQVL ESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKLNIILVQVLKHEWPARWS SFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQKIKELKSSLNSEFRLIHELCLY VLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETLLKFFPMAAYRNLTLQCLTEVAALQF GDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANGSSEEQAFIQNLALFFTSFFKNHMRILEAS PENRAALLLGLEYLIGISYVDDTEVFKVCLDYWNVFVLELFEAHNQMEPAASVNMMGLQAQMLP GVDGTITAVQQRRQLYSGPLSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKRN AADQILRDLQNNPDMWLQVVHILQNSHNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISD VIVQLSSNEASFRQERLYVNKLNIILVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILK LLSEEIFDFSRGEMTQQKIKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWI PVGFIFESPLLETLLKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPP GTIPDAYANGSSEEQAFIQNLALFFTSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEV FKVCLDYWNVFVLELFEAHNQMEPAASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRM LMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKRNAADQILRDLQNNPDMWLQVVHILQN SHNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKLNII LVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQKIKELKSS LNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETLLKFFPMAAYRN LTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANGSSEEQAFIQNLALFF TSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVCLDYWNVFVLELFEAHNQMEPA ASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRMLMICRMAKPEEVLIVEDENGNIVRE TMKDNDVLVQYK(-) MFLSSIRGMPLIRYYGIYRIIQICGCRWSTFCRILTT*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os03g0858100_circ_g.5

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