Plant Circular RNA Database

Detail information of Os04g0620400_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os04g0620400_circ_g.2
					
						ID in PlantcircBase
						osa_circ_025340
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 31534242-31538722  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os04g0620400						
					
						Parent gene annotation
						
							SIT4 phosphatase-associated protein family protein. (Os04t062040
0-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os04g0620400_circ_g.1 Os04g0620400_circ_g.3 Os04g0620400_circ_g.4 						
					
						Support reads
						2
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0620400-01:13

General Information
CircRNA Name	Os04g0620400_circ_g.2
ID in PlantcircBase	osa_circ_025340
Alias	NA
Organism	Oryza sativa
Position	chr4: 31534242-31538722 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os04g0620400
Parent gene annotation	SIT4 phosphatase-associated protein family protein. (Os04t062040 0-01)
Parent gene strand	+
Alternative splicing	Os04g0620400_circ_g.1 Os04g0620400_circ_g.3 Os04g0620400_circ_g.4
Support reads	2
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0620400-01:13

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGATTTGGTTCTTTCAGCAAAATTCTGGGTGGGCTGAGTGGCATGCTGGAACCCTAACTAGGTG
TAACGCAGTAGAAAATGTTTACCAGTGGGCTTGTGGtctgcgggacaaagttcaagtggagcaa
ttactccactacattgtcgaagaggcacctgaagatgctgaaaagaagaggatatttcggtata
catggctt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TCTGCGGGACAAAGTTCAAGTGGAGCAATTACTCCACTACATTGTCGAAGAGGCACCTGAAGAT
GCTGAAAAGAAGAGGATATTTCGGTATACATGGCTTATGGTTGAATAAAAAAACACTTAATGCA
ATCCCCACATGTGGAATTCTCACGAATTTTTGTGTGCAGATTTCCTTTTGTAGCTTGTGAAATA
TTTACATGTGAAGTGGATGTCATAATGAAGACATTAGTGGAGAATGAAGATGTATGTTTCATTT
TAGTTTTCTTATGTTAGCTTGATACAATATTATTCTCCTATCATGGTGTACAATTATCTTGTAT
GACTAATGAAGCCATGCTATCTGTGCAGCTCATGGACTTGCTTTTCTCCTACTTAAAACCTGAC
CGACCTCATGGGACACTGTTGGCTGGTTACTTTTGTAAGGTACTTTTATGCAACCATTCACGTC
TGCAAATTTTTTGTCTCAGCCTGGCTGATTAAATGGTCATTATATACTGCTACCTTTTGCAGGT
CGTGATTTGCTTGATGCTGAGGAAGACTCTCCCATTCGTCAATTATGTGCAGGTTTGTGTAGTT
CTGCTGTCAGTTGTCAGCTCTTCCTTTGCTCTTTTGTTCGCTCACTGTTCTCCCAAGTTAGCCT
TGCCTTCATCTGTCTTTCTTATGCATTTGTATTTACTGTGAAACAGTGGTTTCTGTAGTAAGCA
ATTTGTGCAACAGCTATTACAGCTAACGCCATTTTGTGAAGCAATGTTTGTTCAGCTGATGTCA
CTTTTGGGAGAGGTGAATCTAATCCATTTAGGATATAAATTGTTTTAGGACTTAGTGACGTGCT
ATAAATAATCTAGAGTAATTCATTTTCAGTATAGGTTTGGAGGATAGTTGTGAGGCTACATAGG
GGATGCAACTGTATTGACGCAAAGAATCCACTGAAGCGTAGACATGGAAACTCATCTTAAAGCA
AGGATGAGCAATTTGGCACATGAGTGGATTAAAGGTGTGATATATGTTTAGCATTAGATTCTTC
TAACGAGCAAGGATATTTGTTCAAAAGGTCTAAGAAGGACGTGGGCGTGTGGTAGAGCAACAAT
GCCTTGTATCTCCAAGGCTGTGCTGAAAGAATTTGCAGTTGGTCTTTGCCAAAACTTCTCATGC
TGTGATTGTTTCGTTGCCATTAGCCCATTATTTACGTTCTTTCTATAAGATCCACATCCACCTA
TTGTTTGATGTTGTGCACGGGTGTTAAGGTATCAAATCTACATCTGGGGCTGCAACACAAATAG
GTGTAGAGTATTAAAGTTGGAATCATCAAAATGACAGTTGGTCATAGAGTAGAACTAAAAACCT
GTGACAGTGAACATGCACTTGTAGATGAGTTTCTCATTTGTCTCAGCTTTACACATGTTGAACA
TCTGAAACTCATTTTTCACATCTCTTGTAACCATTCATATTATGTTTAAAGGTTGTACTGTGGA
GAGGTGAATCCATACATTGGTGTTCTGTGCATAAATATTACTTACGGATTTGATTTTTATGTGT
TGCTTATTCCTGCTGCAGGGCCATCCTGAAATAGTTAGCCAACTTGTTGACCTTATTGGTATAA
CTTCTATAATGGAGGTTAGCTTTCTAAAGACAAATTTAAATGCCAAAAAAAATCATCTGTAGCT
TTGGAAAGTCATGGTAACAAATAACATCACTGATTAATCGGCTTAAACAGTTTGATAGCTTGTT
GGTTTGTAATGCAGGTGTTGATCCGCTTGATCGGTGCTGATGAAACTATGTATTCTGGTTATGT
TGACTCAATGCAATGGTTGGATGACATAAAGGTCCTTGAGATGATTGTTGACAAGTTCAGTTCA
TCTGTAAGAACTAAAGATTACTTTTAGCATCTCGTCTCACTTTGTCAATCTTCTGCTTGTCTTG
TTTATTGTTGCTCCAAACTATTTTAACAATAGGACCGCTGCTTGTTACTTCGTTAATTTCTGGT
CAGCATGCATGCTTCCAGTTTTAACGGAAAAATAAGTTAAAACTTCCCTTGGAATTTAAATGAT
CAAGTACTGTCCTCAAGTACTAACTGGTTACATTCCATTCTTTTGAAGATGGCACAATTTTTAT
CATATTCAAATGCAGGAAGTGTTGGCTATTTATATGCTGTTCATATATAATAGAAATTTGTGGG
TAATGCTTTTTTTTATTAACATACTCGTTATAACTTCTGTTGAAGGATTCTCCTGAGGTTCATG
CAAACGCTGCTGAAATCCTTTGTGCGATAACTAGATATGCCCCACCAGCGCTTGCTACAAAAAT
ATCCAGTGCAAGGTGCTTTTCCATCTGCCCATATTGCTGAAATTTTTAAGATGTGTAAAGTCTC
TGGGCTTTGTGATAGCAATTTGATATTCAAAACAATTCTGTGTATCCTTTTTACTTCATGGTTG
CAGTTTTGTGGCGAGACTATTTCACCATGCTTTTGAAGATTCAAGGCCTAAATCGGTGTTGGTC
CACTCATTGTCAGTGTGCATATCTTTGTTGGATCCTAAGAGACTTGTATTAGCTTCCTACCAAG
TTTTCCGTAGTCAACTAAGCCATGCAACATTGGTCACTGCAAGTCCAGAGACAGTTGGTGGCAT
GCTGGATAGCCTAGGTTAGTGGTTCCTTAAGCTGTTATGTCCATATATCTTTTCGTTTGGTGAG
TCACTCTGGCTATGGTCCTTTAAAATATACATCCTTTATTGTCATTTTACATTATTTGCTGTCC
ACAATTAAGTCCAGCTCTTGTTGTGGATTGCTTTTATTAATTCAGAACCTTTACCTGAGTATTA
TTCAGGAAAGCTTTGTATCTTCATAAAATGGTGTAGCCAATGATAAGACACATATAAAACTTCT
GAATACCTCTTTTGAGTAACATGTATACATTCTTCTACTATCATTTAAGCATCCTACATTCAAC
TATTTCTTTTAGTTCTTATGATTATAAAGTGCAAGTAACACATAAAGATGTATGCTCCAACCTC
CAAGGCTAATGCACTGAAAGATCTTAATTTCTACCAATGATGTTTAAGGTGATTTGTTGAAGCT
GCTGGATGTTTCATCTGCTGAAAATGTTCTGCCAACGACATATGGAGTCTTACAACCTCCTCTA
GGAAAGCAACGCTTGAAGGTATGAGTGCTTAATTATATGCAGGTCTGTCGAGCCACAAAGTGCA
TAGATTACATGACATAACAGCGATTTGTGCCTATTTGTGTTTGCCAGCATTTTACATCGCTGTT
GCACAATTATACACTTTTTTGTCTGCGAAGACCTTGAATATAAATATACTTATCCATACCATTG
GTGCCAGATGTCTATTTGACCTTTGATTTCTGTTGTTTAGGTAATTGCTTTACATTTTTCATTG
TTATTCTTGATGTTTTTTTTTTCAGATTGTAGAGTTCATCTCCGTCCTGCTCTCAATTGGAAGT
GAAGCTGCTGAAATTCGATTGATCCATCTAGGAGCAATCAAGCGTGTCATAGATCTATTTTTTG
AGTAAGTTAAATTGCAATGTTGTTTCTCATAAGTTTGTCAAGGAGCTGACATATAATTAATCAT
TAGGTACCCTTTTAACAACTTTTTGCACCACCATGTGGAGAGCATCATCAGTTCTTGTTTAGAT
AGTAAGCAGGATCAGCTGATCTGTCATGTTCTTGATGAGTGTAAGCTTGTTACAAGAATTTTGG
AAGCTGAGAAGAACTCTGCTCTATCAATAGATTTAACTAAGGTACTAAATTAATATCCCACTCT
TTATTTTATTAAACAATTATATTTACTTGCAATTCCCCTTTCAGCACACGGTTCCTTTGGAGGG
GAGATTTACACCAAGGATCGGACTTGTTGGTCATATGACACGCATATCTAACAAACTCATTCAG
CTGGCTAAGACCAACAGCATAATTCAATCACATTTGCAGGTCTGTATTCGATTATGCATAGGGA
AACCTTCGTATTGTTTACATCCCCGACATGTTAGTGGTTTTATTAATGGTCCCTTGCCAATTAT
CTGATGGATCCCTAGACAAGTGGTCGACATGAATGGTTCTTGCATACAGAATATCTGATGGTTT
GCATTAAACTTGGGTTAACCCATTAGTGTTCTGAATGATACTTCCCTTATAATACAGGAAATGA
AAGTTAAACATGATCCAAGGTGACATGTCTTAACCACACTGTCTGTTGAACATAATGATTACGT
GAAATATCCAATACAACAATCAATATGTTTATTACGGGCCTCGTAGCTTCTTAAATATTTATTG
GTTTGTTTTTCTATACAAGCTCATTCTTGCAAATTTTGATTGTGTGATATGCTTTTGAAAATTC
TAGTGGCAGCATTCTTTGTTTGACTCACTTGATTTGGTTCTTTCAGCAAAATTCTGGGTGGGCT
GAGTGGCATGCTGGAACCCTAACTAGGTGTAACGCAGTAGAAAATGTTTACCAGTGGGCTTGTG
G
						
					

			
		

Sequences
Splice junction sequence	TGATTTGGTTCTTTCAGCAAAATTCTGGGTGGGCTGAGTGGCATGCTGGAACCCTAACTAGGTG TAACGCAGTAGAAAATGTTTACCAGTGGGCTTGTGGtctgcgggacaaagttcaagtggagcaa ttactccactacattgtcgaagaggcacctgaagatgctgaaaagaagaggatatttcggtata catggctt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TCTGCGGGACAAAGTTCAAGTGGAGCAATTACTCCACTACATTGTCGAAGAGGCACCTGAAGAT GCTGAAAAGAAGAGGATATTTCGGTATACATGGCTTATGGTTGAATAAAAAAACACTTAATGCA ATCCCCACATGTGGAATTCTCACGAATTTTTGTGTGCAGATTTCCTTTTGTAGCTTGTGAAATA TTTACATGTGAAGTGGATGTCATAATGAAGACATTAGTGGAGAATGAAGATGTATGTTTCATTT TAGTTTTCTTATGTTAGCTTGATACAATATTATTCTCCTATCATGGTGTACAATTATCTTGTAT GACTAATGAAGCCATGCTATCTGTGCAGCTCATGGACTTGCTTTTCTCCTACTTAAAACCTGAC CGACCTCATGGGACACTGTTGGCTGGTTACTTTTGTAAGGTACTTTTATGCAACCATTCACGTC TGCAAATTTTTTGTCTCAGCCTGGCTGATTAAATGGTCATTATATACTGCTACCTTTTGCAGGT CGTGATTTGCTTGATGCTGAGGAAGACTCTCCCATTCGTCAATTATGTGCAGGTTTGTGTAGTT CTGCTGTCAGTTGTCAGCTCTTCCTTTGCTCTTTTGTTCGCTCACTGTTCTCCCAAGTTAGCCT TGCCTTCATCTGTCTTTCTTATGCATTTGTATTTACTGTGAAACAGTGGTTTCTGTAGTAAGCA ATTTGTGCAACAGCTATTACAGCTAACGCCATTTTGTGAAGCAATGTTTGTTCAGCTGATGTCA CTTTTGGGAGAGGTGAATCTAATCCATTTAGGATATAAATTGTTTTAGGACTTAGTGACGTGCT ATAAATAATCTAGAGTAATTCATTTTCAGTATAGGTTTGGAGGATAGTTGTGAGGCTACATAGG GGATGCAACTGTATTGACGCAAAGAATCCACTGAAGCGTAGACATGGAAACTCATCTTAAAGCA AGGATGAGCAATTTGGCACATGAGTGGATTAAAGGTGTGATATATGTTTAGCATTAGATTCTTC TAACGAGCAAGGATATTTGTTCAAAAGGTCTAAGAAGGACGTGGGCGTGTGGTAGAGCAACAAT GCCTTGTATCTCCAAGGCTGTGCTGAAAGAATTTGCAGTTGGTCTTTGCCAAAACTTCTCATGC TGTGATTGTTTCGTTGCCATTAGCCCATTATTTACGTTCTTTCTATAAGATCCACATCCACCTA TTGTTTGATGTTGTGCACGGGTGTTAAGGTATCAAATCTACATCTGGGGCTGCAACACAAATAG GTGTAGAGTATTAAAGTTGGAATCATCAAAATGACAGTTGGTCATAGAGTAGAACTAAAAACCT GTGACAGTGAACATGCACTTGTAGATGAGTTTCTCATTTGTCTCAGCTTTACACATGTTGAACA TCTGAAACTCATTTTTCACATCTCTTGTAACCATTCATATTATGTTTAAAGGTTGTACTGTGGA GAGGTGAATCCATACATTGGTGTTCTGTGCATAAATATTACTTACGGATTTGATTTTTATGTGT TGCTTATTCCTGCTGCAGGGCCATCCTGAAATAGTTAGCCAACTTGTTGACCTTATTGGTATAA CTTCTATAATGGAGGTTAGCTTTCTAAAGACAAATTTAAATGCCAAAAAAAATCATCTGTAGCT TTGGAAAGTCATGGTAACAAATAACATCACTGATTAATCGGCTTAAACAGTTTGATAGCTTGTT GGTTTGTAATGCAGGTGTTGATCCGCTTGATCGGTGCTGATGAAACTATGTATTCTGGTTATGT TGACTCAATGCAATGGTTGGATGACATAAAGGTCCTTGAGATGATTGTTGACAAGTTCAGTTCA TCTGTAAGAACTAAAGATTACTTTTAGCATCTCGTCTCACTTTGTCAATCTTCTGCTTGTCTTG TTTATTGTTGCTCCAAACTATTTTAACAATAGGACCGCTGCTTGTTACTTCGTTAATTTCTGGT CAGCATGCATGCTTCCAGTTTTAACGGAAAAATAAGTTAAAACTTCCCTTGGAATTTAAATGAT CAAGTACTGTCCTCAAGTACTAACTGGTTACATTCCATTCTTTTGAAGATGGCACAATTTTTAT CATATTCAAATGCAGGAAGTGTTGGCTATTTATATGCTGTTCATATATAATAGAAATTTGTGGG TAATGCTTTTTTTTATTAACATACTCGTTATAACTTCTGTTGAAGGATTCTCCTGAGGTTCATG CAAACGCTGCTGAAATCCTTTGTGCGATAACTAGATATGCCCCACCAGCGCTTGCTACAAAAAT ATCCAGTGCAAGGTGCTTTTCCATCTGCCCATATTGCTGAAATTTTTAAGATGTGTAAAGTCTC TGGGCTTTGTGATAGCAATTTGATATTCAAAACAATTCTGTGTATCCTTTTTACTTCATGGTTG CAGTTTTGTGGCGAGACTATTTCACCATGCTTTTGAAGATTCAAGGCCTAAATCGGTGTTGGTC CACTCATTGTCAGTGTGCATATCTTTGTTGGATCCTAAGAGACTTGTATTAGCTTCCTACCAAG TTTTCCGTAGTCAACTAAGCCATGCAACATTGGTCACTGCAAGTCCAGAGACAGTTGGTGGCAT GCTGGATAGCCTAGGTTAGTGGTTCCTTAAGCTGTTATGTCCATATATCTTTTCGTTTGGTGAG TCACTCTGGCTATGGTCCTTTAAAATATACATCCTTTATTGTCATTTTACATTATTTGCTGTCC ACAATTAAGTCCAGCTCTTGTTGTGGATTGCTTTTATTAATTCAGAACCTTTACCTGAGTATTA TTCAGGAAAGCTTTGTATCTTCATAAAATGGTGTAGCCAATGATAAGACACATATAAAACTTCT GAATACCTCTTTTGAGTAACATGTATACATTCTTCTACTATCATTTAAGCATCCTACATTCAAC TATTTCTTTTAGTTCTTATGATTATAAAGTGCAAGTAACACATAAAGATGTATGCTCCAACCTC CAAGGCTAATGCACTGAAAGATCTTAATTTCTACCAATGATGTTTAAGGTGATTTGTTGAAGCT GCTGGATGTTTCATCTGCTGAAAATGTTCTGCCAACGACATATGGAGTCTTACAACCTCCTCTA GGAAAGCAACGCTTGAAGGTATGAGTGCTTAATTATATGCAGGTCTGTCGAGCCACAAAGTGCA TAGATTACATGACATAACAGCGATTTGTGCCTATTTGTGTTTGCCAGCATTTTACATCGCTGTT GCACAATTATACACTTTTTTGTCTGCGAAGACCTTGAATATAAATATACTTATCCATACCATTG GTGCCAGATGTCTATTTGACCTTTGATTTCTGTTGTTTAGGTAATTGCTTTACATTTTTCATTG TTATTCTTGATGTTTTTTTTTTCAGATTGTAGAGTTCATCTCCGTCCTGCTCTCAATTGGAAGT GAAGCTGCTGAAATTCGATTGATCCATCTAGGAGCAATCAAGCGTGTCATAGATCTATTTTTTG AGTAAGTTAAATTGCAATGTTGTTTCTCATAAGTTTGTCAAGGAGCTGACATATAATTAATCAT TAGGTACCCTTTTAACAACTTTTTGCACCACCATGTGGAGAGCATCATCAGTTCTTGTTTAGAT AGTAAGCAGGATCAGCTGATCTGTCATGTTCTTGATGAGTGTAAGCTTGTTACAAGAATTTTGG AAGCTGAGAAGAACTCTGCTCTATCAATAGATTTAACTAAGGTACTAAATTAATATCCCACTCT TTATTTTATTAAACAATTATATTTACTTGCAATTCCCCTTTCAGCACACGGTTCCTTTGGAGGG GAGATTTACACCAAGGATCGGACTTGTTGGTCATATGACACGCATATCTAACAAACTCATTCAG CTGGCTAAGACCAACAGCATAATTCAATCACATTTGCAGGTCTGTATTCGATTATGCATAGGGA AACCTTCGTATTGTTTACATCCCCGACATGTTAGTGGTTTTATTAATGGTCCCTTGCCAATTAT CTGATGGATCCCTAGACAAGTGGTCGACATGAATGGTTCTTGCATACAGAATATCTGATGGTTT GCATTAAACTTGGGTTAACCCATTAGTGTTCTGAATGATACTTCCCTTATAATACAGGAAATGA AAGTTAAACATGATCCAAGGTGACATGTCTTAACCACACTGTCTGTTGAACATAATGATTACGT GAAATATCCAATACAACAATCAATATGTTTATTACGGGCCTCGTAGCTTCTTAAATATTTATTG GTTTGTTTTTCTATACAAGCTCATTCTTGCAAATTTTGATTGTGTGATATGCTTTTGAAAATTC TAGTGGCAGCATTCTTTGTTTGACTCACTTGATTTGGTTCTTTCAGCAAAATTCTGGGTGGGCT GAGTGGCATGCTGGAACCCTAACTAGGTGTAACGCAGTAGAAAATGTTTACCAGTGGGCTTGTG G

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.106663492

Conservation Information
Conserved circRNAs	NA
PMCS	0.106663492

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							31534459-31538719(+)
31538702-31534419(+)
						
					

						Potential amino acid sequence
						
							MKTLVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDL
IGITSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAIT
RYAPPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSH
ATLVTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGS
EAAEIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILE
AEKNSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHA
GTLTRCNAVENVYQWACGLRDKVQVEQLLHYIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIM
KTLVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLI
GITSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITR
YAPPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHA
TLVTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSE
AAEIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEA
EKNSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAG
TLTRCNAVENVYQWACGLRDKVQVEQLLHYIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMK
TLVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIG
ITSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRY
APPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHAT
LVTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEA
AEIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAE
KNSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGT
LTRCNAVENVYQWACGLRDKVQVEQLLHYIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKT
LVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGI
TSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYA
PPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHATL
VTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAA
EIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEK
NSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTL
TRCNAVENVYQWAC(+)
MFTSGLVVCGTKFKWSNYSTTLSKRHLKMLKRRGYFDFLL*(+)
						
					

						Sponge-miRNAs
						
							osa-miR417 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	31534459-31538719(+) 31538702-31534419(+)
Potential amino acid sequence	MKTLVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDL IGITSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAIT RYAPPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSH ATLVTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGS EAAEIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILE AEKNSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHA GTLTRCNAVENVYQWACGLRDKVQVEQLLHYIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIM KTLVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLI GITSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITR YAPPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHA TLVTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSE AAEIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEA EKNSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAG TLTRCNAVENVYQWACGLRDKVQVEQLLHYIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMK TLVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIG ITSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRY APPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHAT LVTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEA AEIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAE KNSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGT LTRCNAVENVYQWACGLRDKVQVEQLLHYIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKT LVENEDLMDLLFSYLKPDRPHGTLLAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGI TSIMEVLIRLIGADETMYSGYVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYA PPALATKISSASFVARLFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHATL VTASPETVGGMLDSLGDLLKLLDVSSAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAA EIRLIHLGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEK NSALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAGTL TRCNAVENVYQWAC(+) MFTSGLVVCGTKFKWSNYSTTLSKRHLKMLKRRGYFDFLL*(+)
Sponge-miRNAs	osa-miR417
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os04g0620400_circ_g.2

Address

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