Plant Circular RNA Database

Detail information of Zm00001d008600_circ_g.1

			
						 General Information
					
						CircRNA Name
						Zm00001d008600_circ_g.1
					
						ID in PlantcircBase
						zma_circ_009549
					
						Alias
						Zm08circ00005
					
						Organism
						
							Zea mays						
					
						Position
						
							chr8: 14147596-14151637  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d008600						
					
						Parent gene annotation
						
							Sulfoquinovosyl transferase SQD2
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d008600_T001:9
Zm00001d008600_T002:8
Zm00001d008600_T003:7

General Information
CircRNA Name	Zm00001d008600_circ_g.1
ID in PlantcircBase	zma_circ_009549
Alias	Zm08circ00005
Organism	Zea mays
Position	chr8: 14147596-14151637 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	CIRI2
Parent gene	Zm00001d008600
Parent gene annotation	Sulfoquinovosyl transferase SQD2
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d008600_T001:9 Zm00001d008600_T002:8 Zm00001d008600_T003:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATTGGCTACTTGGAACTAAATTTTGCTTTATTTTTTTACCAGGGTAATGGAAAGGTTGCCTGG
AGTAAGAATTGCATTTATTGGAGATGGACCATATAGatacatctctgggtataagaaccggttc
cagaacttcatcaaacatttgcgagaaatgggggacgaggtgcgtgttttactgtcatttggta
aggtcgat

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATACATCTCTGGGTATAAGAACCGGTTCCAGAACTTCATCAAACATTTGCGAGAAATGGGGGAC
GAGGTGCGTGTTTTACTGTCATTTGGTAAGGTCGATATTAGAGGGGCAGCAGATTAGTTGGTGT
CGATTAATTTGGTTTAGTTGTATTCTTCAGGTCATTGTTGTGACCAATCATGAGGGAGTTCCCC
AAGAGTTCCATGGCGCCAAGGTTATAGGTTCATGGAGGTAAGTCTTCCAGGATGCTTGTGCCAA
CTTCTGTCTTAAAATATCAGTAGCAGTTCAGGCAATATTTTATGAAGGCCTGAGTTTTCTTGTT
GCTGTTCAAACAATGAATTGAGAATGCCTACTCTGTATAAAAGCTGCCACTAAGAAACATTTGC
TGCGCTTCTACTCCGTACGAAGGAGAGACTTTAATCCAGATCATAACTATACCTTACCTAAAAG
AATAATATGCCTTGGAACTGTTCCTTATGCTACTGCATCGAATCGTCTGGTTTCAGACTTATTC
ATTTAATTAGTATAACTGAATTAATAAGTGAGCACAAGTACAATAGCTCGTCTATTTGCCAAAA
CAACAACAACAAAACATTTTAGTTCCGTATGAGTTGGGGTAGAGTGCGATAGCTGAGTTGATTA
GGTGGTCTGAGTAGCACTTCTCAAGTCCTGGGTTCGATTCCCTGTGAGAACGAATTTTCGTGTT
GTGGTTTAAAAAATTTCCTCGTCTCACACCAAATCACAGGTCTAAGGTCCGGTCACGGTATGGG
CTACGGTGCCATTGTGTATGGGTGGGACATGGGTTTTCTCGATCTGCGTGAGAATGTATTCTTA
ATATAATGTCGTTGGGGCGGTCTTACCCCCGCAGGTCGAGTTTTTTTAAGTTGAGATAGACTAG
AGTTAAAATTCAACCGAAACCAGTAGTCATGGTTAAGACACATGAATAGTTGTTTTCCATGCAC
TCCTAATCAATGCTAAATCATTGATATATTTCATCCTTTTAAGTCTCCTTCTATTGTCTCTTTC
TATATTAACTTTGACCTTCTGCCTCTTTTTCTATTGCTATCGCGCCTTAGAACCCACTATGCAC
TGGTGTCTCTGGAGGTCTCTATTAGACATGTTCAAACAATCTTAATGGGTGTTAAACAAATTTG
TATTCAATTAATGATACCCTATCTTATCAACGTATGTTATCATTCCAAACTTGATCCCTTATTT
TATGTTCACAAATCTAACACACATACACATTTTTTCCAACAATTATCTACTGAACATCGTCTTT
TTGTAAGCTAACATTCTGCACCATACAACATAGCAGGTTTAATTGTCGTCTTATAAAATTTTCC
CTTTACCTTTTGTATACCCTCTTGTCATATAGAATGCAGATGCTTGACGCCACTTTATACACCC
TGCTTTAATTCTATGGCTAACATCTTCATCAATATCCTTATCTCTCTATAACATTGATCCTAAA
TACTGAAATATATCCTTTCTGGGCACTACTTGATCTTTCAAAATAACGTCTTCTTTCTCATGTG
TAGTAGTGATGAAGTCACATCTTATATATTCATGTGTAGTAGTGATGAAGTCACACCTTTGAAC
TCTAGAGTCTCCCACCACAACTCTACTTTTCATGCTCGACTTTCATCAACTAGCACAACATCAT
CCATAAAAAGCATGCACTAAGGGATATCCCCTTGTATGTCCCTTGTGACTTTATCCATCACCAA
GGAAAAAAAAGGTAGGAGCTCAAAGCTGATCCTTGATGTAATCCTATTCTAATCGAGAAGTCAT
CCATGTCTTCATCACTTGTTCGAACTAGTTACAACATTGTTGTACATATCCTTTAATGAGTTCA
ACTTACTTCGTTGGAGCTTAATGTTTGTCCAAAGTCCACCACATAACATTCTTTGATACTTTAT
CATAAGCCTTCTCCAAGTAAAAGAAAACCATGTGTAAGTCTTTGCTCACTATATTGCTCCATCA
CTTGTCTTATTAAAAAAATGACTTACATGGTTGACCTTCCAGACATAAAATCAAATTGGTTCAT
AAAGGTTCTCGTTATTCCTCTCAAACGATGCTCGATAACTCTCTTCCATAGCTTTATAGTATGG
TTCATCAACTTAATTACCCGATAGTATAGCTTTGAATATCTTACTTATTCTTATAGATCGGTAC
CAATGCAAGTTATTTTTAGCTTTGCCTCCACTCCCTTAGGTTGTTGCATTCACCTCTGAGGCCA
CCTTCCAATGCAAGTTATCATCTTCTCCCTATTGTTTGTGTCATCATCTTCCTTCCAAGTGTCC
TCTTTGACGGTCTTCTCTTTGAAGACTTATGTTGTCTCCACTTTCAAATTCCACCACTTTATTG
TCGCAATCTTGGGTTATTTATCCCTTACAGACACACACACACCTAAAAACGAAAGACCGTCACC
ATAAGCTTATGTTGAGAGACAACACACTTTCTAAGTATCACCTTGCAATCTAGACATGTTCGTT
TATGCTCTCTTCCTGTGACTTTGTGAGGACAAATTCAATCTGACTAGAGTGTTGGCCACTACTA
TAGGTAACTAAATATGATTTTCTTTTCCTAAAGAAAGTGTTGGCTATCAACATGTCAAAAATCT
CACCTATTTGCTACATGAGAAATATTTTAAAAATCTTTCTTGAAGTTGTTAAGCTATTGAACAA
TGACACGCAATCATGTTGCCATGCTGGTTGGACTGAAAGCATTGTATTTTCCCTATCGGGTACA
TGATATGTGGTGCCTTTACTTGTGGAATCTTAGGCTTATGACTGTTTTCTCATCCTTTACAGCT
TCCCATGCCCCATGTATGGAAAAGTACCTCTTTCGCTGGCACTCAGTCCTAGGATCATTTCGGA
GGTTGCGAAGTTCAAACCTGACATTATTCATGCGTCTTCTCCTGGAATTATGGTAACTCTTTTA
ACAGTCAAATAATTAATTATCGAATCTCTCTGATTATCTATTATCGCATATGACTAAAGTTCAT
TACTCTTTCAGGTTTTTGGAGCTCTAGCTATTGCCAAGCTACTCGGTGTGCCCCTAGTCATGTC
CTATCACACCCATGTTCCAGTGTAAGTTGACTATGAACTTTATTGCACCAAGTTTTACTGCAAA
CAGACAGAAGTTCAGATTTTTCATTGCCATTGAATCATATTTCTTTTTCTTGCAGATACATACC
TAGATATACATTTAGCTGGCTTGTGGAGCCAATGTGGCAAGTCATAAGTGAGCATTTGCATTTT
AGTTCCACCTCATCTCTTCTTTCCTAAACAGTAACTTGCATGCCTGTCTATGAAACACGCTGAT
TCTTGGTCGTGTTATTCCCGAAACACAGGATTCCTTCATAGAGCTGCTGATTTAACTTTAGTAC
CATCTGCTGCTATCAGCAAAGATTTTGAAACTGCCCAGGTCATATCAGGTTGGACATTTTTTTA
CACAATGTACCAGATGCACATATGTTTTTATTCATGCCATGATGCTAAAGATGTGATTTCCCTC
CTTGTTCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCTGCAAGCTTCCATCCTAG
ATTCCGCAGTCATGAGATGCGAGTCAGGCTAAGGCAATACTCTGTCTCCTTTCTTCCTGAATGT
TCTGCATGCAGCAAGTTGAGATAGACTGTATAAGCTTATGTTGCTTGATGTATTCTTTCAGTGA
CGGTGAGCCTGAAAAACCACTGGTAATTCATGTCGGACGTTTTGGGCGTGAGAAAAGTTTGGAT
TTTTTGAAGATGTAAGCTATTGTGATACTTGCTCCTTTTGTGATTGATTTGATCTTTGATTCTT
AGTTGACAAACATGATGCGTCTTTATTAAAAGCAGAGAGTAATGCAACTAAATTAAATGATCTA
AATGCCATATTTATTCATTCTTCATTCACGCCTTACATCATTGGCTACTTGGAACTAAATTTTG
CTTTATTTTTTTACCAGGGTAATGGAAAGGTTGCCTGGAGTAAGAATTGCATTTATTGGAGATG
GACCATATAG
						
					

			
		

Sequences
Splice junction sequence	CATTGGCTACTTGGAACTAAATTTTGCTTTATTTTTTTACCAGGGTAATGGAAAGGTTGCCTGG AGTAAGAATTGCATTTATTGGAGATGGACCATATAGatacatctctgggtataagaaccggttc cagaacttcatcaaacatttgcgagaaatgggggacgaggtgcgtgttttactgtcatttggta aggtcgat
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATACATCTCTGGGTATAAGAACCGGTTCCAGAACTTCATCAAACATTTGCGAGAAATGGGGGAC GAGGTGCGTGTTTTACTGTCATTTGGTAAGGTCGATATTAGAGGGGCAGCAGATTAGTTGGTGT CGATTAATTTGGTTTAGTTGTATTCTTCAGGTCATTGTTGTGACCAATCATGAGGGAGTTCCCC AAGAGTTCCATGGCGCCAAGGTTATAGGTTCATGGAGGTAAGTCTTCCAGGATGCTTGTGCCAA CTTCTGTCTTAAAATATCAGTAGCAGTTCAGGCAATATTTTATGAAGGCCTGAGTTTTCTTGTT GCTGTTCAAACAATGAATTGAGAATGCCTACTCTGTATAAAAGCTGCCACTAAGAAACATTTGC TGCGCTTCTACTCCGTACGAAGGAGAGACTTTAATCCAGATCATAACTATACCTTACCTAAAAG AATAATATGCCTTGGAACTGTTCCTTATGCTACTGCATCGAATCGTCTGGTTTCAGACTTATTC ATTTAATTAGTATAACTGAATTAATAAGTGAGCACAAGTACAATAGCTCGTCTATTTGCCAAAA CAACAACAACAAAACATTTTAGTTCCGTATGAGTTGGGGTAGAGTGCGATAGCTGAGTTGATTA GGTGGTCTGAGTAGCACTTCTCAAGTCCTGGGTTCGATTCCCTGTGAGAACGAATTTTCGTGTT GTGGTTTAAAAAATTTCCTCGTCTCACACCAAATCACAGGTCTAAGGTCCGGTCACGGTATGGG CTACGGTGCCATTGTGTATGGGTGGGACATGGGTTTTCTCGATCTGCGTGAGAATGTATTCTTA ATATAATGTCGTTGGGGCGGTCTTACCCCCGCAGGTCGAGTTTTTTTAAGTTGAGATAGACTAG AGTTAAAATTCAACCGAAACCAGTAGTCATGGTTAAGACACATGAATAGTTGTTTTCCATGCAC TCCTAATCAATGCTAAATCATTGATATATTTCATCCTTTTAAGTCTCCTTCTATTGTCTCTTTC TATATTAACTTTGACCTTCTGCCTCTTTTTCTATTGCTATCGCGCCTTAGAACCCACTATGCAC TGGTGTCTCTGGAGGTCTCTATTAGACATGTTCAAACAATCTTAATGGGTGTTAAACAAATTTG TATTCAATTAATGATACCCTATCTTATCAACGTATGTTATCATTCCAAACTTGATCCCTTATTT TATGTTCACAAATCTAACACACATACACATTTTTTCCAACAATTATCTACTGAACATCGTCTTT TTGTAAGCTAACATTCTGCACCATACAACATAGCAGGTTTAATTGTCGTCTTATAAAATTTTCC CTTTACCTTTTGTATACCCTCTTGTCATATAGAATGCAGATGCTTGACGCCACTTTATACACCC TGCTTTAATTCTATGGCTAACATCTTCATCAATATCCTTATCTCTCTATAACATTGATCCTAAA TACTGAAATATATCCTTTCTGGGCACTACTTGATCTTTCAAAATAACGTCTTCTTTCTCATGTG TAGTAGTGATGAAGTCACATCTTATATATTCATGTGTAGTAGTGATGAAGTCACACCTTTGAAC TCTAGAGTCTCCCACCACAACTCTACTTTTCATGCTCGACTTTCATCAACTAGCACAACATCAT CCATAAAAAGCATGCACTAAGGGATATCCCCTTGTATGTCCCTTGTGACTTTATCCATCACCAA GGAAAAAAAAGGTAGGAGCTCAAAGCTGATCCTTGATGTAATCCTATTCTAATCGAGAAGTCAT CCATGTCTTCATCACTTGTTCGAACTAGTTACAACATTGTTGTACATATCCTTTAATGAGTTCA ACTTACTTCGTTGGAGCTTAATGTTTGTCCAAAGTCCACCACATAACATTCTTTGATACTTTAT CATAAGCCTTCTCCAAGTAAAAGAAAACCATGTGTAAGTCTTTGCTCACTATATTGCTCCATCA CTTGTCTTATTAAAAAAATGACTTACATGGTTGACCTTCCAGACATAAAATCAAATTGGTTCAT AAAGGTTCTCGTTATTCCTCTCAAACGATGCTCGATAACTCTCTTCCATAGCTTTATAGTATGG TTCATCAACTTAATTACCCGATAGTATAGCTTTGAATATCTTACTTATTCTTATAGATCGGTAC CAATGCAAGTTATTTTTAGCTTTGCCTCCACTCCCTTAGGTTGTTGCATTCACCTCTGAGGCCA CCTTCCAATGCAAGTTATCATCTTCTCCCTATTGTTTGTGTCATCATCTTCCTTCCAAGTGTCC TCTTTGACGGTCTTCTCTTTGAAGACTTATGTTGTCTCCACTTTCAAATTCCACCACTTTATTG TCGCAATCTTGGGTTATTTATCCCTTACAGACACACACACACCTAAAAACGAAAGACCGTCACC ATAAGCTTATGTTGAGAGACAACACACTTTCTAAGTATCACCTTGCAATCTAGACATGTTCGTT TATGCTCTCTTCCTGTGACTTTGTGAGGACAAATTCAATCTGACTAGAGTGTTGGCCACTACTA TAGGTAACTAAATATGATTTTCTTTTCCTAAAGAAAGTGTTGGCTATCAACATGTCAAAAATCT CACCTATTTGCTACATGAGAAATATTTTAAAAATCTTTCTTGAAGTTGTTAAGCTATTGAACAA TGACACGCAATCATGTTGCCATGCTGGTTGGACTGAAAGCATTGTATTTTCCCTATCGGGTACA TGATATGTGGTGCCTTTACTTGTGGAATCTTAGGCTTATGACTGTTTTCTCATCCTTTACAGCT TCCCATGCCCCATGTATGGAAAAGTACCTCTTTCGCTGGCACTCAGTCCTAGGATCATTTCGGA GGTTGCGAAGTTCAAACCTGACATTATTCATGCGTCTTCTCCTGGAATTATGGTAACTCTTTTA ACAGTCAAATAATTAATTATCGAATCTCTCTGATTATCTATTATCGCATATGACTAAAGTTCAT TACTCTTTCAGGTTTTTGGAGCTCTAGCTATTGCCAAGCTACTCGGTGTGCCCCTAGTCATGTC CTATCACACCCATGTTCCAGTGTAAGTTGACTATGAACTTTATTGCACCAAGTTTTACTGCAAA CAGACAGAAGTTCAGATTTTTCATTGCCATTGAATCATATTTCTTTTTCTTGCAGATACATACC TAGATATACATTTAGCTGGCTTGTGGAGCCAATGTGGCAAGTCATAAGTGAGCATTTGCATTTT AGTTCCACCTCATCTCTTCTTTCCTAAACAGTAACTTGCATGCCTGTCTATGAAACACGCTGAT TCTTGGTCGTGTTATTCCCGAAACACAGGATTCCTTCATAGAGCTGCTGATTTAACTTTAGTAC CATCTGCTGCTATCAGCAAAGATTTTGAAACTGCCCAGGTCATATCAGGTTGGACATTTTTTTA CACAATGTACCAGATGCACATATGTTTTTATTCATGCCATGATGCTAAAGATGTGATTTCCCTC CTTGTTCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCTGCAAGCTTCCATCCTAG ATTCCGCAGTCATGAGATGCGAGTCAGGCTAAGGCAATACTCTGTCTCCTTTCTTCCTGAATGT TCTGCATGCAGCAAGTTGAGATAGACTGTATAAGCTTATGTTGCTTGATGTATTCTTTCAGTGA CGGTGAGCCTGAAAAACCACTGGTAATTCATGTCGGACGTTTTGGGCGTGAGAAAAGTTTGGAT TTTTTGAAGATGTAAGCTATTGTGATACTTGCTCCTTTTGTGATTGATTTGATCTTTGATTCTT AGTTGACAAACATGATGCGTCTTTATTAAAAGCAGAGAGTAATGCAACTAAATTAAATGATCTA AATGCCATATTTATTCATTCTTCATTCACGCCTTACATCATTGGCTACTTGGAACTAAATTTTG CTTTATTTTTTTACCAGGGTAATGGAAAGGTTGCCTGGAGTAAGAATTGCATTTATTGGAGATG GACCATATAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.117918745

Conservation Information
Conserved circRNAs	NA
PMCS	0.117918745

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							14147652-14151634(+)
14151626-14147763(+)
14147760-14151337(-)
14147800-14151210(-)
						
						Potential amino acid sequence
						
							MGDEVIVVTNHEGVPQEFHGAKVIGSWSFPCPMYGKVPLSLALSPRIISEVAKFKPDIIHASSP
GIMVFGALAIAKLLGVPLVMSYHTHVPVYIPRYTFSWLVEPMWQVIRFLHRAADLTLVPSAAIS
KDFETAQVISANRIRLWNKGVDSASFHPRFRSHEMRVRLSDGEPEKPLVIHVGRFGREKSLDFL
KMVMERLPGVRIAFIGDGPYRYISGYKNRFQNFIKHLREMGDEVIVVTNHEGVPQEFHGAKVIG
SWSFPCPMYGKVPLSLALSPRIISEVAKFKPDIIHASSPGIMVFGALAIAKLLGVPLVMSYHTH
VPVYIPRYTFSWLVEPMWQVIRFLHRAADLTLVPSAAISKDFETAQVISANRIRLWNKGVDSAS
FHPRFRSHEMRVRLSDGEPEKPLVIHVGRFGREKSLDFLKMVMERLPGVRIAFIGDGPYRYISG
YKNRFQNFIKHLREMGDEVIVVTNHEGVPQEFHGAKVIGSWSFPCPMYGKVPLSLALSPRIISE
VAKFKPDIIHASSPGIMVFGALAIAKLLGVPLVMSYHTHVPVYIPRYTFSWLVEPMWQVIRFLH
RAADLTLVPSAAISKDFETAQVISANRIRLWNKGVDSASFHPRFRSHEMRVRLSDGEPEKPLVI
HVGRFGREKSLDFLKMVMERLPGVRIAFIGDGPYRYISGYKNRFQNFIKHLREMGDEVIVVTNH
EGVPQEFHGAKVIGSWSFPCPMYGKVPLSLALSPRIISEVAKFKPDIIHASSPGIMVFGALAIA
KLLGVPLVMSYHTHVPVYIPRYTFSWLVEPMWQVIRFLHRAADLTLVPSAAISKDFETAQVISA
NRIRLWNKGVDSASFHPRFRSHEMRVRLSDGEPEKPLVIHVGRFGREKSLDFLKMVMERLPGVR
IAFIGDGPY(+)
MDHIDTSLGIRTGSRTSSNICEKWGTRSLL*(+)
MTSSPISRKCLMKFWNRFLYPEMYLYGPSPINAILTPGNLSITIFKKSKLFSRPKRPT*(-)
MELLGNSLMIGHNNDLVPHFSQMFDEVLEPVLIPRDVSIWSISNKCNSYSRQPFHYHLQKIQTF
LTPKTSDMNYQWFFRLTVT*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	14147652-14151634(+) 14151626-14147763(+) 14147760-14151337(-) 14147800-14151210(-)
Potential amino acid sequence	MGDEVIVVTNHEGVPQEFHGAKVIGSWSFPCPMYGKVPLSLALSPRIISEVAKFKPDIIHASSP GIMVFGALAIAKLLGVPLVMSYHTHVPVYIPRYTFSWLVEPMWQVIRFLHRAADLTLVPSAAIS KDFETAQVISANRIRLWNKGVDSASFHPRFRSHEMRVRLSDGEPEKPLVIHVGRFGREKSLDFL KMVMERLPGVRIAFIGDGPYRYISGYKNRFQNFIKHLREMGDEVIVVTNHEGVPQEFHGAKVIG SWSFPCPMYGKVPLSLALSPRIISEVAKFKPDIIHASSPGIMVFGALAIAKLLGVPLVMSYHTH VPVYIPRYTFSWLVEPMWQVIRFLHRAADLTLVPSAAISKDFETAQVISANRIRLWNKGVDSAS FHPRFRSHEMRVRLSDGEPEKPLVIHVGRFGREKSLDFLKMVMERLPGVRIAFIGDGPYRYISG YKNRFQNFIKHLREMGDEVIVVTNHEGVPQEFHGAKVIGSWSFPCPMYGKVPLSLALSPRIISE VAKFKPDIIHASSPGIMVFGALAIAKLLGVPLVMSYHTHVPVYIPRYTFSWLVEPMWQVIRFLH RAADLTLVPSAAISKDFETAQVISANRIRLWNKGVDSASFHPRFRSHEMRVRLSDGEPEKPLVI HVGRFGREKSLDFLKMVMERLPGVRIAFIGDGPYRYISGYKNRFQNFIKHLREMGDEVIVVTNH EGVPQEFHGAKVIGSWSFPCPMYGKVPLSLALSPRIISEVAKFKPDIIHASSPGIMVFGALAIA KLLGVPLVMSYHTHVPVYIPRYTFSWLVEPMWQVIRFLHRAADLTLVPSAAISKDFETAQVISA NRIRLWNKGVDSASFHPRFRSHEMRVRLSDGEPEKPLVIHVGRFGREKSLDFLKMVMERLPGVR IAFIGDGPY(+) MDHIDTSLGIRTGSRTSSNICEKWGTRSLL(+) MTSSPISRKCLMKFWNRFLYPEMYLYGPSPINAILTPGNLSITIFKKSKLFSRPKRPT(-) MELLGNSLMIGHNNDLVPHFSQMFDEVLEPVLIPRDVSIWSISNKCNSYSRQPFHYHLQKIQTF LTPKTSDMNYQWFFRLTVT*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d008600_circ_g.1

Address

Any questions?

Supported by