Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT3G09600_circ_g.2 |
ID in PlantcircBase | ath_circ_020688 |
Alias | 3:2946925-2948296 |
Organism | Arabidpsis thaliana |
Position | chr3: 2946925-2948296 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT3G09600 |
Parent gene annotation |
Protein REVEILLE 8 |
Parent gene strand | + |
Alternative splicing | AT3G09600_circ_g.1 |
Support reads | 1/2 |
Tissues | seedling;flower |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT3G09600.3:7 AT3G09600.2:7 AT3G09600.4:6 AT3G09600.1:7 AT3G09600.9:7 AT3G09600.6:7 AT3G09600.8:7 AT3G09600.7:7 AT3G09600.5:7 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.181246222 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |