CircRNA Name |
AT1G06210_circ_g.2 |
ID in PlantcircBase |
ath_circ_000949 |
Alias |
At_ciR486, Ath_circ_FC0212 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 1897562-1898422 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
ue-circRNA
|
Identification method |
CIRCexplorer, KNIFE, PcircRNA_finder, find_circ |
Parent gene |
AT1G06210 |
Parent gene annotation |
TOM1-like protein 2 |
Parent gene strand |
+ |
Alternative splicing |
AT1G06210_circ_g.1 AT1G06210_circ_g.3 |
Support reads |
10/14/5 |
Tissues |
leaf/root, whole_plant/seedlings |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT1G06210.2:2 AT1G06210.1:2
|