Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G13060_circ_g.4 |
ID in PlantcircBase | ath_circ_002341 |
Alias | Chr1:4453385|4453853 |
Organism | Arabidpsis thaliana |
Position | chr1: 4453385-4453853 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | CIRCexplorer; CIRI |
Parent gene | AT1G13060 |
Parent gene annotation |
20S proteasome beta subunit E1 |
Parent gene strand | + |
Alternative splicing | AT1G13060_circ_g.5 AT1G13060_circ_g.6 |
Support reads | 5 |
Tissues | seedling |
Exon boundary | Yes-No |
Splicing signals | GA-AA |
Number of exons covered | AT1G13060.3:1 AT1G13060.1:1 AT1G13060.2:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.127753678 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to methyl jasmonate |
Other Information | |
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References | Zhang et al., 2020 |