Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d026270_circ_g.4 |
ID in PlantcircBase | zma_circ_003241 |
Alias | circ367 |
Organism | Zea mays |
Position | chr10: 142465732-142468180 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d026270 |
Parent gene annotation |
RING/FYVE/PHD zinc finger superfamily protein |
Parent gene strand | - |
Alternative splicing | Zm00001d026270_circ_g.2 Zm00001d026270_circ_g.3 Zm00001d026270_circ_g.5 |
Support reads | 3 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d026270_T019:7 Zm00001d026270_T020:6 Zm00001d026270_T001:7 Zm00001d026270_T021:7 Zm00001d026270_T007:7 Zm00001d026270_T005:7 Zm00001d026270_T014:7 Zm00001d026270_T011:7 Zm00001d026270_T002:7 Zm00001d026270_T018:7 Zm00001d026270_T013:7 Zm00001d026270_T016:6 Zm00001d026270_T009:7 Zm00001d026270_T017:7 Zm00001d026270_T004:7 Zm00001d026270_T015:2 Zm00001d026270_T003:6 Zm00001d026270_T006:7 Zm00001d026270_T010:7 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.010515857 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |