Plant Circular RNA Database

Detail information of Zm00001d052001_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d052001_circ_g.2
					
						ID in PlantcircBase
						zma_circ_008156
					
						Alias
						Zm04circ00069
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 176247820-176251723  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d052001						
					
						Parent gene annotation
						
							Chaperone protein dnaJ  
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d052001_circ_g.1 Zm00001d052001_circ_g.3 Zm00001d052001_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d052001_T011:5
Zm00001d052001_T002:5
Zm00001d052001_T007:5
Zm00001d052001_T001:5
Zm00001d052001_T010:5
Zm00001d052001_T012:4
Zm00001d052001_T009:5
Zm00001d052001_T005:5
Zm00001d052001_T008:5
Zm00001d052001_T013:5
Zm00001d052001_T006:4
Zm00001d052001_T003:5
Zm00001d052001_T004:6

General Information
CircRNA Name	Zm00001d052001_circ_g.2
ID in PlantcircBase	zma_circ_008156
Alias	Zm04circ00069
Organism	Zea mays
Position	chr4: 176247820-176251723 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2
Parent gene	Zm00001d052001
Parent gene annotation	Chaperone protein dnaJ
Parent gene strand	+
Alternative splicing	Zm00001d052001_circ_g.1 Zm00001d052001_circ_g.3 Zm00001d052001_circ_g.4
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d052001_T011:5 Zm00001d052001_T002:5 Zm00001d052001_T007:5 Zm00001d052001_T001:5 Zm00001d052001_T010:5 Zm00001d052001_T012:4 Zm00001d052001_T009:5 Zm00001d052001_T005:5 Zm00001d052001_T008:5 Zm00001d052001_T013:5 Zm00001d052001_T006:4 Zm00001d052001_T003:5 Zm00001d052001_T004:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTATCCGTGTCAGGAAGGAGATCAAAGTAAAAATCCCTCCAGGAGTGAGCAAAGGCAGTACTCT
TCGTGTACGTGGGGAAGGTGATGCAGGATCAAAAGGtaccatcctgatgtcaataaggagccgg
gagcgaccgaaaagtttaaagagataagtgcagcatatgaggtatgcaattccttttaacaagt
atgtggta

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 656
Transcript exons: 176247820-176247888,176249402-176249494,176249677-176249
798,176250680-176250875,176251548-176251723
TACCATCCTGATGTCAATAAGGAGCCGGGAGCGACCGAAAAGTTTAAAGAGATAAGTGCAGCAT
ATGAGGTGCTGTCAGATGAAAAGAAGAGGACGTTGTATGACCAATATGGTGAAGCTGGGGTTAA
GAGTGCGGTTGGAGGCTCGGGTGGAGCTTACACAACCAACCCATTTGATTTGTTTGAGACATTC
TTTGGAGGCAGCATGGGTGGTTTTTCTGGCATGGACCAGAGCACGTTTAGGACAAGCAGGCAAA
ATACTGTTTTACAGGGTGAAGACATCAGATATGATGTGGTTTTGGGGTTCACAGAGGCGATATT
TGGAACAGAGAAATATATTATACTATCTCATTTGGAAACATGTGATACATGTGGTGGTTCTGGA
TCAAAAGCTGGCTCCAAGATGAGAATATGTTCGACATGTGGTGGGCGAGGGCAAGTAATGCGAA
CTGAGCAAACACCATTTGGTCTGTTCTCCCAGGTTTCTATTTGCCCCACTTGCGCAGGAGAGGG
CGAAGTCATCTCAGAGTATTGTAGGAAATGTTCTGGAGAGGGGCGTATCCGTGTCAGGAAGGAG
ATCAAAGTAAAAATCCCTCCAGGAGTGAGCAAAGGCAGTACTCTTCGTGTACGTGGGGAAGGTG
ATGCAGGATCAAAAGG
						
					

						Genomic sequence
						
							TACCATCCTGATGTCAATAAGGAGCCGGGAGCGACCGAAAAGTTTAAAGAGATAAGTGCAGCAT
ATGAGGTATGCAATTCCTTTTAACAAGTATGTGGTATCCAGTATTTTGCTTAACATGTTCTATC
TACTGTTATGAGAATAGCCTTTTGGCTAAAATTGACTGAAAAACTGTTGTTCTTACATGCCTTT
GAGGTTTCAGTCTGTAGCTGGCTTCCTGACGCAGATGATTAAAAAATTTAATGCACAGCTTATT
AATTGACCAAGTGTTATGGTTGGCAGCACCTATAGACGCCGTCAAAGGAGCCAATTAGGCAGGA
GAGTATTAAGAGATCAATTAGGAAAGGATCAACCACGAAAGCCTGAATTAGCAGGCAAGATCTA
GGAGAGAATTATGCTGTATTCTCCTTTATAATCAGGGCTGATCAAGGAATAAACAAGCAATAAA
GACAATCCAATTCTCACCCCCTTTCTTTGTTACCTCATCTCATTGCTGCTCACCTTCGACACAG
CCACCACGGGTAGGAAACCGGCGGCCGAACGGCTGGCGACCTCCCACATCTATCCTATCTGGTC
ACTTCCCCAAGGTCATGACACCAAGTAACATACCATTGCTGTGAATATGCGGTACTATTTCTGA
AAATGGTGAATTGTCCATTCAATAGTTAACTATTTTTAACATAGTAGACAATCTACTTTAAAAT
TATAAGTTCTTATTCTGTTCTCAACTTGTCACTAGTCTGCTGTCATTGTAGACTCAAACATGCA
AAGTATCTGACCACATATTTGGTGCTTTGCATCTATATTTTGGACAGTAGATCGTCTTGCCAAA
CGTGGTTTCCCTCATCTGGAGGTCTGTCCCTTGTGTGGCCAAGCTGATGAGACCCTCCAACACA
TTCTCATCGGTTGTGTCTTTTCCAGGCAGATCTGGGTCCTGATCCTGCAATCTTTGAACTTGGC
TGACATTGCCCACTCGGTGTCTGATTCACGTTTTTCCCTGGTGGGCACGCTCTGTCAAGCTGGT
GCCCAAAATTATGCGGAAGGGGCTTAACACTCGTATTTTAGTTGCCTGGGAAATCTGGAAATTC
AGCAACCTGTGTGTGTTTGAGGGCTCCCTGCAAAATGTTCAACTCCATAGGATAGGAAGTGAGG
GCCTCCTTTGGTGTGCTGCTGGAGCTTCTGAGTTGCATGAGCTCCTTAGTAGGTCGCTAACCCC
ATCTGGTTAGGTGCTGGAAGTCCTGGTTGTTTATGTTGTCTTTTATGTAGATCCCCTTAGGGGC
ATGTACTGTACTCGGGTTCGATTGCTTTGACCTTTTCCCGCTGTTTTCCTCCTTAAATGAAATG
ACGTGCCACTCTCCTGTGTTGTTCGAGAAAAAAAGTATGGTTAGTGCTGTGCTACTGTTCTTAT
CCAGTCAACCTAATATTCAGTTGGATTGCATCACGTCATCACCTGTATCAAATGGTTCTATATT
TTTCGACTCAGATTATGTACTCTCCATTATTTGATGAATTACTCAATCAGAGACCTGATTCTGT
TTACTTCCTTCAGTCATTTTGGATTACTGAATTTTATTGTCATTAGGTGCTGTCAGATGAAAAG
AAGAGGACGTTGTATGACCAATATGGTGAAGCTGGGGTTAAGAGTGCGGTTGGAGGCTCGGGTG
GAGCTTACACAGTACTACTTTTCCACTCTCTCTAAAAAAAGAATCTGGCATGACTGTGCTACAT
TCTTTCAACATGATTATATTTTTATGCACTCAAGTTTGTTAGCTTGAGGATAAAAAGTGTTATT
AGATCTCGTGGTCTTTTTGGTTAACTAAGTTTTCTTTGTTTTCACCGATCTTTTCTTCCATGCA
GACCAACCCATTTGATTTGTTTGAGACATTCTTTGGAGGCAGCATGGGTGGTTTTTCTGGCATG
GACCAGAGCACGTTTAGGACAAGCAGGCAAAATACTGTTTTACAGGGTGAAGACATCAGGTTTG
TCGCCACCTGCAAGACATGTTGAAATGAGATGATACTTAAGATCAGTTGTGTTTCTTCTTCGAA
AATGCTGGCAAATCTAATTTTTAGTTCACTGTTAGTTGTTCTAGTTAGTATCTGCAAAATCTCA
AATGTGCAGTGTTATTTGCCTGAATGTAATATGTAGCATGCACTATTTCATTATTTGGTACTGC
CATACTGGATAAGCAAAATGCTTGGGTCCCCAGAATAATAGGCTGTTTGGTCATAGTATGCTAA
AATCAAGCTGTATCCTTCGTACCTTCCTTGTGATGATTTTTTGAGATATTTGTCTGCCCTCTGT
TGGTTTTCGAATTCTGGCAGCCACACTATTGCAAATACTACTCTGTTTTCCTATACACTCGGAG
TCTTGCATTTCTATAGCTTTTGTCTGCTCTGCAAATAATACATCTCATCAAATACTCCTAGAAT
TTTAGAGTAATCCAAAATATAGTAAGAGCGATACTTTCAATTATGTGTGCCAAAACCAGTAACT
AGTCTTGGATTTATATAGCTTTTGTCTGCTCTGCAAATAATACATCTCATCAAATACTTCTAGA
ATTCTAGAATAATCCAAAATATAGTAAAAGCGATACTTTCAATTATGTGTGCCAAAACCAGTAA
CTAGGTGAAGTGGGGTGGGGTAGGTTGGGGAGCAGTCTGTTCTCGCATGCCATTTCTAACGCTG
TTTGGTTCATTTGTCTGCCTGCATCTATCTTTTTTTATATTATTTACAACCCTGTAAATATATC
AATACTGATGTTAGTGCTAGTTCTGCTACATTGTTTGTTTTGTGCTCAAGAACAGAATAGTTAC
AGGACCAGCGTAATTCTTCAACTGACACAAATTTATTTGATCAGATATGATGTGGTTTTGGGGT
TCACAGAGGCGATATTTGGAACAGAGAAATATATTATACTATCTCATTTGGAAACATGTGATAC
ATGTGGTGGTTCTGGATCAAAAGCTGGCTCCAAGATGAGAATATGTTCGACATGTGGTGGGCGA
GGGCAAGTAATGCGAACTGAGCAAACACCATTTGGTCTGTTCTCCCAGGTAACCATGTGACATC
CTATACAAACTGTTTAACTTCATAACATTATTCATGAGATTTACAGTGAAGACATGGTTGCAAT
AATGTGACAGCTTTCATGCTGCTTGTTTTGTGCGAGTATCCTAACATTAGCATTTAAATTATGT
TTTCTACAAGACTGGAGGCTCAAGGTCTTCTTTTCTTGAACACACAGGAAATCTATGTGTCATT
TGATTGAAGAGGAAAAAAGGTACAGACTACAGTAGCAACACACACGGGTTCTAGAAACTTAGAA
GAATTGTGCTACAGACAACAAAAGGATGGCCACAGCACATAGTGCTAAGAACCAGGGAGGGGGA
TAGAATAGCCAATAACACTGTTCCTGAGATCCCCAACACTGGAAGCACACCAGTTGGTTCCTAC
GTCAATCACTTTTCTGACCACCATAATTACAGAGTGGCATTGGTAAAATCAGCCATTATGATGC
TTCCACAGTTCCTAAGCAGCAAGGATGATAAGAGTATTAAGGTGTTGCTATGTGTTCAATAAAT
AAGTGTATTAAGGTGCCAAGCTTAAGGTCTCAACATTAGCCAAAAAGAAACTATGCTTATAACC
TTTGGATCACCTGAATTTGATTTGATTCTATTGCAATTGGTGGTGGTTACATTATTTATTTCTT
TATTTTTGTCTTGTAGGTTTCTATTTGCCCCACTTGCGCAGGAGAGGGCGAAGTCATCTCAGAG
TATTGTAGGAAATGTTCTGGAGAGGGGCGTATCCGTGTCAGGAAGGAGATCAAAGTAAAAATCC
CTCCAGGAGTGAGCAAAGGCAGTACTCTTCGTGTACGTGGGGAAGGTGATGCAGGATCAAAAGG
						
					

			
		

Sequences
Splice junction sequence	GTATCCGTGTCAGGAAGGAGATCAAAGTAAAAATCCCTCCAGGAGTGAGCAAAGGCAGTACTCT TCGTGTACGTGGGGAAGGTGATGCAGGATCAAAAGGtaccatcctgatgtcaataaggagccgg gagcgaccgaaaagtttaaagagataagtgcagcatatgaggtatgcaattccttttaacaagt atgtggta
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 656 Transcript exons: 176247820-176247888,176249402-176249494,176249677-176249 798,176250680-176250875,176251548-176251723 TACCATCCTGATGTCAATAAGGAGCCGGGAGCGACCGAAAAGTTTAAAGAGATAAGTGCAGCAT ATGAGGTGCTGTCAGATGAAAAGAAGAGGACGTTGTATGACCAATATGGTGAAGCTGGGGTTAA GAGTGCGGTTGGAGGCTCGGGTGGAGCTTACACAACCAACCCATTTGATTTGTTTGAGACATTC TTTGGAGGCAGCATGGGTGGTTTTTCTGGCATGGACCAGAGCACGTTTAGGACAAGCAGGCAAA ATACTGTTTTACAGGGTGAAGACATCAGATATGATGTGGTTTTGGGGTTCACAGAGGCGATATT TGGAACAGAGAAATATATTATACTATCTCATTTGGAAACATGTGATACATGTGGTGGTTCTGGA TCAAAAGCTGGCTCCAAGATGAGAATATGTTCGACATGTGGTGGGCGAGGGCAAGTAATGCGAA CTGAGCAAACACCATTTGGTCTGTTCTCCCAGGTTTCTATTTGCCCCACTTGCGCAGGAGAGGG CGAAGTCATCTCAGAGTATTGTAGGAAATGTTCTGGAGAGGGGCGTATCCGTGTCAGGAAGGAG ATCAAAGTAAAAATCCCTCCAGGAGTGAGCAAAGGCAGTACTCTTCGTGTACGTGGGGAAGGTG ATGCAGGATCAAAAGG
Genomic sequence	TACCATCCTGATGTCAATAAGGAGCCGGGAGCGACCGAAAAGTTTAAAGAGATAAGTGCAGCAT ATGAGGTATGCAATTCCTTTTAACAAGTATGTGGTATCCAGTATTTTGCTTAACATGTTCTATC TACTGTTATGAGAATAGCCTTTTGGCTAAAATTGACTGAAAAACTGTTGTTCTTACATGCCTTT GAGGTTTCAGTCTGTAGCTGGCTTCCTGACGCAGATGATTAAAAAATTTAATGCACAGCTTATT AATTGACCAAGTGTTATGGTTGGCAGCACCTATAGACGCCGTCAAAGGAGCCAATTAGGCAGGA GAGTATTAAGAGATCAATTAGGAAAGGATCAACCACGAAAGCCTGAATTAGCAGGCAAGATCTA GGAGAGAATTATGCTGTATTCTCCTTTATAATCAGGGCTGATCAAGGAATAAACAAGCAATAAA GACAATCCAATTCTCACCCCCTTTCTTTGTTACCTCATCTCATTGCTGCTCACCTTCGACACAG CCACCACGGGTAGGAAACCGGCGGCCGAACGGCTGGCGACCTCCCACATCTATCCTATCTGGTC ACTTCCCCAAGGTCATGACACCAAGTAACATACCATTGCTGTGAATATGCGGTACTATTTCTGA AAATGGTGAATTGTCCATTCAATAGTTAACTATTTTTAACATAGTAGACAATCTACTTTAAAAT TATAAGTTCTTATTCTGTTCTCAACTTGTCACTAGTCTGCTGTCATTGTAGACTCAAACATGCA AAGTATCTGACCACATATTTGGTGCTTTGCATCTATATTTTGGACAGTAGATCGTCTTGCCAAA CGTGGTTTCCCTCATCTGGAGGTCTGTCCCTTGTGTGGCCAAGCTGATGAGACCCTCCAACACA TTCTCATCGGTTGTGTCTTTTCCAGGCAGATCTGGGTCCTGATCCTGCAATCTTTGAACTTGGC TGACATTGCCCACTCGGTGTCTGATTCACGTTTTTCCCTGGTGGGCACGCTCTGTCAAGCTGGT GCCCAAAATTATGCGGAAGGGGCTTAACACTCGTATTTTAGTTGCCTGGGAAATCTGGAAATTC AGCAACCTGTGTGTGTTTGAGGGCTCCCTGCAAAATGTTCAACTCCATAGGATAGGAAGTGAGG GCCTCCTTTGGTGTGCTGCTGGAGCTTCTGAGTTGCATGAGCTCCTTAGTAGGTCGCTAACCCC ATCTGGTTAGGTGCTGGAAGTCCTGGTTGTTTATGTTGTCTTTTATGTAGATCCCCTTAGGGGC ATGTACTGTACTCGGGTTCGATTGCTTTGACCTTTTCCCGCTGTTTTCCTCCTTAAATGAAATG ACGTGCCACTCTCCTGTGTTGTTCGAGAAAAAAAGTATGGTTAGTGCTGTGCTACTGTTCTTAT CCAGTCAACCTAATATTCAGTTGGATTGCATCACGTCATCACCTGTATCAAATGGTTCTATATT TTTCGACTCAGATTATGTACTCTCCATTATTTGATGAATTACTCAATCAGAGACCTGATTCTGT TTACTTCCTTCAGTCATTTTGGATTACTGAATTTTATTGTCATTAGGTGCTGTCAGATGAAAAG AAGAGGACGTTGTATGACCAATATGGTGAAGCTGGGGTTAAGAGTGCGGTTGGAGGCTCGGGTG GAGCTTACACAGTACTACTTTTCCACTCTCTCTAAAAAAAGAATCTGGCATGACTGTGCTACAT TCTTTCAACATGATTATATTTTTATGCACTCAAGTTTGTTAGCTTGAGGATAAAAAGTGTTATT AGATCTCGTGGTCTTTTTGGTTAACTAAGTTTTCTTTGTTTTCACCGATCTTTTCTTCCATGCA GACCAACCCATTTGATTTGTTTGAGACATTCTTTGGAGGCAGCATGGGTGGTTTTTCTGGCATG GACCAGAGCACGTTTAGGACAAGCAGGCAAAATACTGTTTTACAGGGTGAAGACATCAGGTTTG TCGCCACCTGCAAGACATGTTGAAATGAGATGATACTTAAGATCAGTTGTGTTTCTTCTTCGAA AATGCTGGCAAATCTAATTTTTAGTTCACTGTTAGTTGTTCTAGTTAGTATCTGCAAAATCTCA AATGTGCAGTGTTATTTGCCTGAATGTAATATGTAGCATGCACTATTTCATTATTTGGTACTGC CATACTGGATAAGCAAAATGCTTGGGTCCCCAGAATAATAGGCTGTTTGGTCATAGTATGCTAA AATCAAGCTGTATCCTTCGTACCTTCCTTGTGATGATTTTTTGAGATATTTGTCTGCCCTCTGT TGGTTTTCGAATTCTGGCAGCCACACTATTGCAAATACTACTCTGTTTTCCTATACACTCGGAG TCTTGCATTTCTATAGCTTTTGTCTGCTCTGCAAATAATACATCTCATCAAATACTCCTAGAAT TTTAGAGTAATCCAAAATATAGTAAGAGCGATACTTTCAATTATGTGTGCCAAAACCAGTAACT AGTCTTGGATTTATATAGCTTTTGTCTGCTCTGCAAATAATACATCTCATCAAATACTTCTAGA ATTCTAGAATAATCCAAAATATAGTAAAAGCGATACTTTCAATTATGTGTGCCAAAACCAGTAA CTAGGTGAAGTGGGGTGGGGTAGGTTGGGGAGCAGTCTGTTCTCGCATGCCATTTCTAACGCTG TTTGGTTCATTTGTCTGCCTGCATCTATCTTTTTTTATATTATTTACAACCCTGTAAATATATC AATACTGATGTTAGTGCTAGTTCTGCTACATTGTTTGTTTTGTGCTCAAGAACAGAATAGTTAC AGGACCAGCGTAATTCTTCAACTGACACAAATTTATTTGATCAGATATGATGTGGTTTTGGGGT TCACAGAGGCGATATTTGGAACAGAGAAATATATTATACTATCTCATTTGGAAACATGTGATAC ATGTGGTGGTTCTGGATCAAAAGCTGGCTCCAAGATGAGAATATGTTCGACATGTGGTGGGCGA GGGCAAGTAATGCGAACTGAGCAAACACCATTTGGTCTGTTCTCCCAGGTAACCATGTGACATC CTATACAAACTGTTTAACTTCATAACATTATTCATGAGATTTACAGTGAAGACATGGTTGCAAT AATGTGACAGCTTTCATGCTGCTTGTTTTGTGCGAGTATCCTAACATTAGCATTTAAATTATGT TTTCTACAAGACTGGAGGCTCAAGGTCTTCTTTTCTTGAACACACAGGAAATCTATGTGTCATT TGATTGAAGAGGAAAAAAGGTACAGACTACAGTAGCAACACACACGGGTTCTAGAAACTTAGAA GAATTGTGCTACAGACAACAAAAGGATGGCCACAGCACATAGTGCTAAGAACCAGGGAGGGGGA TAGAATAGCCAATAACACTGTTCCTGAGATCCCCAACACTGGAAGCACACCAGTTGGTTCCTAC GTCAATCACTTTTCTGACCACCATAATTACAGAGTGGCATTGGTAAAATCAGCCATTATGATGC TTCCACAGTTCCTAAGCAGCAAGGATGATAAGAGTATTAAGGTGTTGCTATGTGTTCAATAAAT AAGTGTATTAAGGTGCCAAGCTTAAGGTCTCAACATTAGCCAAAAAGAAACTATGCTTATAACC TTTGGATCACCTGAATTTGATTTGATTCTATTGCAATTGGTGGTGGTTACATTATTTATTTCTT TATTTTTGTCTTGTAGGTTTCTATTTGCCCCACTTGCGCAGGAGAGGGCGAAGTCATCTCAGAG TATTGTAGGAAATGTTCTGGAGAGGGGCGTATCCGTGTCAGGAAGGAGATCAAAGTAAAAATCC CTCCAGGAGTGAGCAAAGGCAGTACTCTTCGTGTACGTGGGGAAGGTGATGCAGGATCAAAAGG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.139634068

Conservation Information
Conserved circRNAs	NA
PMCS	0.139634068

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							176249720-176247871(+)
176247827-176250745(-)
						
						Potential amino acid sequence
						
							MGGFSGMDQSTFRTSRQNTVLQGEDIRYDVVLGFTEAIFGTEKYIILSHLETCDTCGGSGSKAG
SKMRICSTCGGRGQVMRTEQTPFGLFSQVSICPTCAGEGEVISEYCRKCSGEGRIRVRKEIKVK
IPPGVSKGSTLRVRGEGDAGSKGTILMSIRSRERPKSLKR*(+)
MVPFDPASPSPRTRRVLPLLTPGGIFTLISFLTRIRPSPEHFLQYSEMTSPSPAQVGQIETWEN
RPNGVCSVRITCPRPPHVEHILILEPAFDPEPPHVSHVSK*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	176249720-176247871(+) 176247827-176250745(-)
Potential amino acid sequence	MGGFSGMDQSTFRTSRQNTVLQGEDIRYDVVLGFTEAIFGTEKYIILSHLETCDTCGGSGSKAG SKMRICSTCGGRGQVMRTEQTPFGLFSQVSICPTCAGEGEVISEYCRKCSGEGRIRVRKEIKVK IPPGVSKGSTLRVRGEGDAGSKGTILMSIRSRERPKSLKR(+) MVPFDPASPSPRTRRVLPLLTPGGIFTLISFLTRIRPSPEHFLQYSEMTSPSPAQVGQIETWEN RPNGVCSVRITCPRPPHVEHILILEPAFDPEPPHVSHVSK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Han et al., 2020

circRNA

Detail information of Zm00001d052001_circ_g.2

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