Plant Circular RNA Database

Detail information of Os08g0554400_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os08g0554400_circ_g.2
					
						ID in PlantcircBase
						osa_circ_037994
					
						Alias
						Os08circ15730/Os_ciR445
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr8: 27737960-27738788  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os08g0554400						
					
						Parent gene annotation
						
							Zinc finger, C2H2-type domain containing protein. (Os08t0554400-
01);Zinc finger, C2H2-type domain containing protein. (Os08t0554
400-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os08g0554400_circ_g.1 Os08g0554400_circ_g.3 						
					
						Support reads
						9/75/113
					
						Tissues
						leaf and panicle/root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os08t0554400-01:2
Os08t0554400-02:2

General Information
CircRNA Name	Os08g0554400_circ_g.2
ID in PlantcircBase	osa_circ_037994
Alias	Os08circ15730/Os_ciR445
Organism	Oryza sativa
Position	chr8: 27737960-27738788 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
Parent gene	Os08g0554400
Parent gene annotation	Zinc finger, C2H2-type domain containing protein. (Os08t0554400- 01);Zinc finger, C2H2-type domain containing protein. (Os08t0554 400-02)
Parent gene strand	-
Alternative splicing	Os08g0554400_circ_g.1 Os08g0554400_circ_g.3
Support reads	9/75/113
Tissues	leaf and panicle/root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os08t0554400-01:2 Os08t0554400-02:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCT
ACCAGCTGACTTCCAATCCTCTTCGATTTGCACGACctggagaagagggtgccgcagtcgcagc
ggtactcgcgggtgccgcaggtcttggagtgagccttccagtcggactggacggcgtagcgctt
gttgcact

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 156
Transcript exons: 27737960-27738039,27738713-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTG
ACTTCCAATCCTCTTCGATTTGCACGAC
Transcript length: 212
Transcript exons: 27737960-27738091,27738709-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAA
TCCTCTTCGATTTGCACGAC
Transcript length: 219
Transcript exons: 27737960-27738102,27738713-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGA
CTTCCAATCCTCTTCGATTTGCACGAC
Transcript length: 229
Transcript exons: 27737960-27738053,27738654-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAAT
TAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTC
TACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC
Transcript length: 264
Transcript exons: 27737960-27738085,27738651-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGGT
TAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTC
GATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATT
TGCACGAC
Transcript length: 264
Transcript exons: 27737960-27738087,27738653-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
TAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTC
GATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATT
TGCACGAC
Transcript length: 274
Transcript exons: 27737960-27738079,27738635-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCCTAATTGT
CTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGT
CACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATC
CTCTTCGATTTGCACGAC
Transcript length: 278
Transcript exons: 27737960-27738042,27738590-27738690,27738695-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCATCTCTATCTCTGATGATAGTTAATCAGCTCAAACCACTGATAGA
CTAATTGTCTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAAATCCAATT
AAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCC
AATCCTCTTCGATTTGCACGAC
Transcript length: 282
Transcript exons: 27737960-27738097,27738645-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCC
AATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGAC
TTCCAATCCTCTTCGATTTGCACGAC
Transcript length: 321
Transcript exons: 27737960-27738137,27738646-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGGTTCTGTTAAATTG
TGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTA
GTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGA
C
Transcript length: 334
Transcript exons: 27737960-27738166,27738662-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG
ACGCAGGACGGCTCCGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACA
CTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCT
TCGATTTGCACGAC
Transcript length: 343
Transcript exons: 27737960-27738182,27738669-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG
ACGCAGGACGGCTCCGGGCACAGGTACACCCAAGAAGATAGGCATGGAATTAATCCAATCCAAT
TAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTC
CAATCCTCTTCGATTTGCACGAC
Transcript length: 380
Transcript exons: 27737960-27738137,27738587-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGGCCATCTCTATCTC
TGATGATAGTTAATCAGCTCAAACCACTGATAGACTAATTGTCTTGTTCTGTTAAATTGTGGCT
GAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATG
TGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC
Transcript length: 411
Transcript exons: 27737960-27738162,27738581-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG
ACGCAGGACGGGCGGCTGCCATCTCTATCTCTGATGATAGTTAATCAGCTCAAACCACTGATAG
ACTAATTGTCTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATC
CAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGA
CTTCCAATCCTCTTCGATTTGCACGAC
Transcript length: 745
Transcript exons: 27737960-27738356,27738441-27738788
CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG
ACGCAGGACGGCTCCGGGCACAGGTACACCCGCCGCCGCGTCTCCTTGGGGTTCTTCTGCTTCA
GCTTCCATGGCAGGTTGTGCCCTCGCCGGTGCAGCTGCAGGTTCTGCTCCCTCTGGAACCCCTT
GTTGCACACCTCGCACACGAACCTGTTCGTCGCCAGCAGCGTGTGCGGCGACAGCGCCACCACC
TCCGCATCAGGATTTGGATTCCCGGGCTGATTCCTCTTCTTCTTGGGCGGCGGCGTGGCCGCGA
CCGGAGCAGCCGCGTTGTTCTGCAGGGGAGGCTGCTGCTGCTGCTGCTGCATCTGCGGCTCGCC
GAGACCGAAGTAGTGTGCAGACGAGGCGGCTGCCATCTCTATCTCTGATGATAGTTAATCAGCT
CAAACCACTGATAGACTAATTGTCTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATG
GAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCT
AGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC
						
					

						Genomic sequence
						
							CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT
TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG
CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG
ACGCAGGACGGCTCCGGGCACAGGTACACCCGCCGCCGCGTCTCCTTGGGGTTCTTCTGCTTCA
GCTTCCATGGCAGGTTGTGCCCTCGCCGGTGCAGCTGCAGGTTCTGCTCCCTCTGGAACCCCTT
GTTGCACACCTCGCACACGAACCTGTTCGTCGCCAGCAGCGTGTGCGGCGACAGCGCCACCACC
TCCGCATCAGGATCTACGTACATTATCAATTCATCATTGAATTAATTGATCATCTGCGAAATTC
ATTCAGAGGAATTATATTAAATGAGATACTTGCTTGGATTCCCGGGCTGATTCCTCTTCTTCTT
GGGCGGCGGCGTGGCCGCGACCGGAGCAGCCGCGTTGTTCTGCAGGGGAGGCTGCTGCTGCTGC
TGCTGCATCTGCGGCTCGCCGAGACCGAAGTAGTGTGCAGACGAGGCGGCTGCCATCTCTATCT
CTGATGATAGTTAATCAGCTCAAACCACTGATAGACTAATTGTCTTGTTCTGTTAAATTGTGGC
TGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTAT
GTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC
						
					

			
		

Sequences
Splice junction sequence	AATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCT ACCAGCTGACTTCCAATCCTCTTCGATTTGCACGACctggagaagagggtgccgcagtcgcagc ggtactcgcgggtgccgcaggtcttggagtgagccttccagtcggactggacggcgtagcgctt gttgcact
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 156 Transcript exons: 27737960-27738039,27738713-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTG ACTTCCAATCCTCTTCGATTTGCACGAC Transcript length: 212 Transcript exons: 27737960-27738091,27738709-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAA TCCTCTTCGATTTGCACGAC Transcript length: 219 Transcript exons: 27737960-27738102,27738713-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGA CTTCCAATCCTCTTCGATTTGCACGAC Transcript length: 229 Transcript exons: 27737960-27738053,27738654-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAAT TAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTC TACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC Transcript length: 264 Transcript exons: 27737960-27738085,27738651-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGGT TAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTC GATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATT TGCACGAC Transcript length: 264 Transcript exons: 27737960-27738087,27738653-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG TAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTC GATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATT TGCACGAC Transcript length: 274 Transcript exons: 27737960-27738079,27738635-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCCTAATTGT CTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGT CACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATC CTCTTCGATTTGCACGAC Transcript length: 278 Transcript exons: 27737960-27738042,27738590-27738690,27738695-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCATCTCTATCTCTGATGATAGTTAATCAGCTCAAACCACTGATAGA CTAATTGTCTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAAATCCAATT AAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCC AATCCTCTTCGATTTGCACGAC Transcript length: 282 Transcript exons: 27737960-27738097,27738645-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCC AATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGAC TTCCAATCCTCTTCGATTTGCACGAC Transcript length: 321 Transcript exons: 27737960-27738137,27738646-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGGTTCTGTTAAATTG TGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTA GTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGA C Transcript length: 334 Transcript exons: 27737960-27738166,27738662-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG ACGCAGGACGGCTCCGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACA CTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCT TCGATTTGCACGAC Transcript length: 343 Transcript exons: 27737960-27738182,27738669-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG ACGCAGGACGGCTCCGGGCACAGGTACACCCAAGAAGATAGGCATGGAATTAATCCAATCCAAT TAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTC CAATCCTCTTCGATTTGCACGAC Transcript length: 380 Transcript exons: 27737960-27738137,27738587-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGGCCATCTCTATCTC TGATGATAGTTAATCAGCTCAAACCACTGATAGACTAATTGTCTTGTTCTGTTAAATTGTGGCT GAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATG TGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC Transcript length: 411 Transcript exons: 27737960-27738162,27738581-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG ACGCAGGACGGGCGGCTGCCATCTCTATCTCTGATGATAGTTAATCAGCTCAAACCACTGATAG ACTAATTGTCTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATGGAATTAATCCAATC CAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCTAGTCTACCAGCTGA CTTCCAATCCTCTTCGATTTGCACGAC Transcript length: 745 Transcript exons: 27737960-27738356,27738441-27738788 CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG ACGCAGGACGGCTCCGGGCACAGGTACACCCGCCGCCGCGTCTCCTTGGGGTTCTTCTGCTTCA GCTTCCATGGCAGGTTGTGCCCTCGCCGGTGCAGCTGCAGGTTCTGCTCCCTCTGGAACCCCTT GTTGCACACCTCGCACACGAACCTGTTCGTCGCCAGCAGCGTGTGCGGCGACAGCGCCACCACC TCCGCATCAGGATTTGGATTCCCGGGCTGATTCCTCTTCTTCTTGGGCGGCGGCGTGGCCGCGA CCGGAGCAGCCGCGTTGTTCTGCAGGGGAGGCTGCTGCTGCTGCTGCTGCATCTGCGGCTCGCC GAGACCGAAGTAGTGTGCAGACGAGGCGGCTGCCATCTCTATCTCTGATGATAGTTAATCAGCT CAAACCACTGATAGACTAATTGTCTTGTTCTGTTAAATTGTGGCTGAAGAAGAAGATAGGCATG GAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTATGTGTATCTTGGACGCTAGCT AGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC
Genomic sequence	CTGGAGAAGAGGGTGCCGCAGTCGCAGCGGTACTCGCGGGTGCCGCAGGTCTTGGAGTGAGCCT TCCAGTCGGACTGGACGGCGTAGCGCTTGTTGCACTTGTCGCACTTCCACTTCTTCTCGCCGTG CTTGCGGGAGTAGTGCTTCTTGATGCCGGTGAGGTCGCCGAGGGCTCGCGACGGGTCGTGGTGG ACGCAGGACGGCTCCGGGCACAGGTACACCCGCCGCCGCGTCTCCTTGGGGTTCTTCTGCTTCA GCTTCCATGGCAGGTTGTGCCCTCGCCGGTGCAGCTGCAGGTTCTGCTCCCTCTGGAACCCCTT GTTGCACACCTCGCACACGAACCTGTTCGTCGCCAGCAGCGTGTGCGGCGACAGCGCCACCACC TCCGCATCAGGATCTACGTACATTATCAATTCATCATTGAATTAATTGATCATCTGCGAAATTC ATTCAGAGGAATTATATTAAATGAGATACTTGCTTGGATTCCCGGGCTGATTCCTCTTCTTCTT GGGCGGCGGCGTGGCCGCGACCGGAGCAGCCGCGTTGTTCTGCAGGGGAGGCTGCTGCTGCTGC TGCTGCATCTGCGGCTCGCCGAGACCGAAGTAGTGTGCAGACGAGGCGGCTGCCATCTCTATCT CTGATGATAGTTAATCAGCTCAAACCACTGATAGACTAATTGTCTTGTTCTGTTAAATTGTGGC TGAAGAAGAAGATAGGCATGGAATTAATCCAATCCAATTAAGTCACACTCTTCGATAGTAGTAT GTGTATCTTGGACGCTAGCTAGTCTACCAGCTGACTTCCAATCCTCTTCGATTTGCACGAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_007900* osi_circ_018145 osi_circ_007899* osi_circ_018144 
						
						PMCS
						0.860259528

Conservation Information
Conserved circRNAs	osi_circ_007900* osi_circ_018145 osi_circ_007899* osi_circ_018144
PMCS	0.860259528

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							27738225-27738689(-)
27738593-27738748(-)
						
						Potential amino acid sequence
						
							MEAEAEEPQGDAAAGVPVPGAVLRPPRPVASPRRPHRHQEALLPQARREEVEVRQVQQALRRPV
RLEGSLQDLRHPRVPLRLRHPLLQVVQIEEDWKSAGRLASVQDTHTTIEECDLIGLD*(-)
MAAASSAHYFGLGEPQMQQQQQQPPLQNNAAAPVAATPPPKKKRNQPGNPNPDAEVVALSPHTL
LATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVHHDPSRALG
DLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRSCKSKRIGS
QLVD*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	27738225-27738689(-) 27738593-27738748(-)
Potential amino acid sequence	MEAEAEEPQGDAAAGVPVPGAVLRPPRPVASPRRPHRHQEALLPQARREEVEVRQVQQALRRPV RLEGSLQDLRHPRVPLRLRHPLLQVVQIEEDWKSAGRLASVQDTHTTIEECDLIGLD(-) MAAASSAHYFGLGEPQMQQQQQQPPLQNNAAAPVAATPPPKKKRNQPGNPNPDAEVVALSPHTL LATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVHHDPSRALG DLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRSCKSKRIGS QLVD(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os08g0554400_circ_g.2

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