Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d047426_circ_g.2 |
ID in PlantcircBase | zma_circ_003009 |
Alias | circ1897 |
Organism | Zea mays |
Position | chr9: 129708896-129710504 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d047426 |
Parent gene annotation |
Peptidyl-prolyl cis-trans isomerase PASTICCINO1 |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 4 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d047426_T011:5 Zm00001d047426_T009:4 Zm00001d047426_T004:5 Zm00001d047426_T005:4 Zm00001d047426_T001:5 Zm00001d047426_T002:5 Zm00001d047426_T007:5 Zm00001d047426_T010:4 Zm00001d047426_T012:4 Zm00001d047426_T003:5 Zm00001d047426_T008:5 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.008340455 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chen et al., 2017b |