Plant Circular RNA Database

Detail information of AT4G02260_circ_g.4

			
						 General Information
					
						CircRNA Name
						AT4G02260_circ_g.4
					
						ID in PlantcircBase
						ath_circ_029350
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 987384-990965  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							AT4G02260						
					
						Parent gene annotation
						
							RSH1
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G02260_circ_g.3 AT4G02260_circ_g.5 AT4G02260_circ_g.6 AT4G02260_circ_g.7 AT4G02260_circ_g.8 AT4G02260_circ_g.9 						
					
						Support reads
						1
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G02260.4:17
AT4G02260.1:17
AT4G02260.2:17
AT4G02260.3:16

General Information
CircRNA Name	AT4G02260_circ_g.4
ID in PlantcircBase	ath_circ_029350
Alias	NA
Organism	Arabidpsis thaliana
Position	chr4: 987384-990965 JBrowse»
Reference genome	TAIR10.38
Type	ue-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	AT4G02260
Parent gene annotation	RSH1
Parent gene strand	+
Alternative splicing	AT4G02260_circ_g.3 AT4G02260_circ_g.5 AT4G02260_circ_g.6 AT4G02260_circ_g.7 AT4G02260_circ_g.8 AT4G02260_circ_g.9
Support reads	1
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G02260.4:17 AT4G02260.1:17 AT4G02260.2:17 AT4G02260.3:16

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTCATCTTACAAAACTTATGGTTTATTGCAGGCCGAGATTGACAGAGGAAGAGGATTAGCAGTA
ATGTTATTTCAAATAGAAGCAAACATTGAAAGTTTGgtgtcaaaactgggaaagttaaagtgta
aaacggaaagtgaaacaatacaagatgtaaaagcagatgatttgcggcagatgtttctggcgat
gacagacg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTGTCAAAACTGGGAAAGTTAAAGTGTAAAACGGAAAGTGAAACAATACAAGATGTAAAAGCAG
ATGATTTGCGGCAGATGTTTCTGGCGATGACAGACGAGGTTTCAGTCTTTTAAGATTTTGTATT
AGCTGGTGTGGTTATATATTTATCAGCATGTCTAACTGCTTCAATCCAGGTCCGCGTCATTATT
GTCAAACTAGCTGACCGGTTGCATAATATGCGAACTCTCTGCCACATGCCTCCCCATAAGCAGG
TGATTCTTTCAAGTAGTTGAGATTTGTTGCCCATAGCTCCAGCTCTATGTTTCATTTGGGATAA
CTAATGAATTTGTGAGTTTCGTCCAGTCCAGCATTGCAGGGGAGACTTTGCAGGTCTTTGCTCC
TTTAGCAAAATTATTGGGAATGTATTCAATAAAGGTATAACCCTTTAAGTATTATTTTTGCTTG
CTATAATTCTTATGGAAATATTAACTAGGTGGCCATTATTTCCGGTTACATCAGTCGAAATGTA
TGTTAGTGTGCATGTGAAACTGAATTATTTCAATCGTTGTGTCCAATGGCGTTCTGAGTTTTGT
GGTGGTAATCTTGCAGTCTGAACTGGAAAATCTGTCTTTCATGTACGTAAGTGCTGAGGATTAT
GATAGAGTCACTAGCAGGATTGCTAACCTCTACAAAGAGCATGAAAAAGAACTCACTGAGGTAA
TTTCAACTATTATCGTCTCTGAGCTTAAAATGCCAAAACATAGATTGAAAAACAAAAGGATATT
AGAGAAGAATGTTGATTAGCGACCTACACCTCTTTGACCTTTCGAACTCTGAATTCATCTGGGC
GTTTATTTAGTTCATCTGCATTCACAGAGTCCTACTATGTATCTTAGGCAAACAGAATTTTGGT
GAAAAAGATTGAAGATGATCAGTTTCTGGACCTTGTGACTGTGAATACTGATGTTCGATCTGTT
TGCAAGGAAACTTACAGGTGAATTCATAAGTGACTTCTTCATTTTACCTTGTAACCTACCCTTT
TCTTCAGCATCTGAAGTCTCTTTTTTTATCTGCAGCATCTACAAAGCTGCTCTCAAATCGAAAG
GATCAATTAATGATTACAACCAGATTGCTCAGGTTTGTGTTATACTCTTGTCTCCAAGTTGTAT
CAAAGGTTTTGAATACAAAACTTCCATCTGAAGCTTATATGATTGTTAACACGCTGCCTCTCCT
AATTTCATTATTTTAGCAGTTACGGATTGTTGTAAAGCCAAAACCATCTGTAGGGGTCGGGCCT
TTGTGCAGTCCACAACAGGTGAAATCCCAATGAAAAGGAAATGGGTATATTTTGTTCCGATTCG
TTCTTGTGTGTCACTTAGCTTTCTCGCTCTGTCGTCAATGCAGATATGCTATCACGTTCTGGGG
CTTGTTCATGAGATCTGGAAACCTATTCCACGAACAGTATGTATCAGATCTTTTGTTATTCAGG
TTATATCTTATCTACATTGGGACTGAACATATGTCTTACAGGTAAAAGATTACATTGCAACCCC
GAAGCCCAATGGATACCAGAGCCTCCATACTACTGTGATTCCATTCTTGTATGAGAGTATGTTT
CGACTGGAGGTTCAGGTATTTGAGATAAAAATCTTTTATCACAGTTCTTAGAAAAACGCCGATG
ATTAGTACAATTGAATTCGGTTTTAGTATTTTAAAGGTTCAAGCATGGGGAATATTTAAAAGGC
TGATTTGATTGGTTATTAAGACTACATTTTTCTCTGCAGATCAGAACCGAGGAGATGGACTTGA
TTGCTGAAAGGGGCATTGCTGTTTACTACAATGGCAAGTCTCTATCTACTGGATTAGTTGGAAA
CGCGGTTCCTTTAGGTAGAAATTCAAGGGGGAAGACGGGTTGCCTCAACAATGCAGATTTTGCA
CTCAGGGTATTTACTGACCATATTCAGAATTAAAAAAGCAGAGAGACGTGCTAGATGTAGGCGT
AATGTGTTCCTTTTTACCTTCCCAGTGTGATTTTAGTTATGACAGTTTATTTTTCCAGGTTGGG
TGGCTAAATGCAATAAGGGAATGGCAAGAGGAGTTTGTGGGTAACATGAGCTCTAGAGAATTTG
TGGATACCATTACGAGGGATCTTTTAGGTAGTCGTGTGTTTGTATTCACACCTAAAGGAGAGGT
AAGGACTACTATACCTCAAAGCCTCTTTAACCATCATCTAACATTTTTATGTTTTTGATTAAAT
GCTTTGGTGTTCTATTTGCAGATAAAGAACCTCCCGAAAGGGGCCACCGTTGTTGACTACGCTT
ATCTGATTCACACCGAAATCGGAAACAAGATGGTAGCAGCAAAGGTATTTTCCCTAGTTATGTC
GTTCTTTCCATGATAACTTTGATTCTCGATTTGTTATCTTTGAAATAGAGACAACAATTGGACC
AGACTTTAATGATACTTAATGGCTTGAAACTGCAGGTCAATGGTAATCTTGTTTCCCCAACTCA
CGTTCTTGAGAATGCTGAGGTCGTGGAGATAGTCACCTACAACGTTTGTACCTTTTTCCCTTGC
TTTTGTTTTAAATTTCTCCCTTTTCTTCTTGTCCTGCTTAGGAAAATTTTGATTGCCTTCATCA
TGTTCCACGGGCTCTCATGTTTTATTATTATTGTCACATCACAGGCCCTCTCAAGTAAATCTGC
TTTCCAAAGACATAAACAGTGGTTGCAACATGCCAAAACAAGGAGTGCAAGACACAAGATTATG
AGGGTATGTTATTTTTAATTCTTTACTTCATGCTAATTGGCTCACTATTTACTAATTCATGTCT
CTCATCTTGTTCCAGTTCCTAAGGGAGCAAGCTGCACAATGTGCTGCCGAAATTACCCAGGATC
AAGTGAATGACTTTGTGGCGGACTCTGATAGTGATGTGGAAGATCTCACAGAAGATTCAAGAAA
GAGCCTACAATGGTGGGAGAAAATCCTCGTCAATGTTAAGCAATTCCAGTCACAAGACAAAAGT
AGAGATACAACACCCGCTCCTCAAAACGGAAGCGTTTGGGCCCCAAAGGTGAATGGAAAACACA
ACAAAGCCATAAAGAACTCGAGTTCTGATGAGCCAGAGTTCCTCCTACCTGGAGATGGAATTGC
CAGGATTTTACCTGCTAATATCCCTGCTTATAAGGAAGTGTTGCCCGGCTTAGACAGTTGGCGA
GACAGTAAAATTGCCACATGGCATCATCTCGAAGGTCAGTCCATCGAATGGTTATGTGTAGTAT
CCATGGATCGCAAAGGTATGGGTATATTCGTTTTGTTTAGTCATGATTGATGATTCCAACAACT
TACAAAGTAAATATGAACTCTTTGTTACATTTGGCAGGCATAATCGCAGAGGTTACAACAGTCC
TCGCAGCTGAAGGCATTGCATTATGTTCTTGCGTGGTTCGTGGTTTTACTTTAAACCTTGCTTC
TAAAAACATTTTATAGTTCCTAACTACTCATCTTACAAAACTTATGGTTTATTGCAGGCCGAGA
TTGACAGAGGAAGAGGATTAGCAGTAATGTTATTTCAAATAGAAGCAAACATTGAAAGTTTG
						
					

			
		

Sequences
Splice junction sequence	CTCATCTTACAAAACTTATGGTTTATTGCAGGCCGAGATTGACAGAGGAAGAGGATTAGCAGTA ATGTTATTTCAAATAGAAGCAAACATTGAAAGTTTGgtgtcaaaactgggaaagttaaagtgta aaacggaaagtgaaacaatacaagatgtaaaagcagatgatttgcggcagatgtttctggcgat gacagacg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTGTCAAAACTGGGAAAGTTAAAGTGTAAAACGGAAAGTGAAACAATACAAGATGTAAAAGCAG ATGATTTGCGGCAGATGTTTCTGGCGATGACAGACGAGGTTTCAGTCTTTTAAGATTTTGTATT AGCTGGTGTGGTTATATATTTATCAGCATGTCTAACTGCTTCAATCCAGGTCCGCGTCATTATT GTCAAACTAGCTGACCGGTTGCATAATATGCGAACTCTCTGCCACATGCCTCCCCATAAGCAGG TGATTCTTTCAAGTAGTTGAGATTTGTTGCCCATAGCTCCAGCTCTATGTTTCATTTGGGATAA CTAATGAATTTGTGAGTTTCGTCCAGTCCAGCATTGCAGGGGAGACTTTGCAGGTCTTTGCTCC TTTAGCAAAATTATTGGGAATGTATTCAATAAAGGTATAACCCTTTAAGTATTATTTTTGCTTG CTATAATTCTTATGGAAATATTAACTAGGTGGCCATTATTTCCGGTTACATCAGTCGAAATGTA TGTTAGTGTGCATGTGAAACTGAATTATTTCAATCGTTGTGTCCAATGGCGTTCTGAGTTTTGT GGTGGTAATCTTGCAGTCTGAACTGGAAAATCTGTCTTTCATGTACGTAAGTGCTGAGGATTAT GATAGAGTCACTAGCAGGATTGCTAACCTCTACAAAGAGCATGAAAAAGAACTCACTGAGGTAA TTTCAACTATTATCGTCTCTGAGCTTAAAATGCCAAAACATAGATTGAAAAACAAAAGGATATT AGAGAAGAATGTTGATTAGCGACCTACACCTCTTTGACCTTTCGAACTCTGAATTCATCTGGGC GTTTATTTAGTTCATCTGCATTCACAGAGTCCTACTATGTATCTTAGGCAAACAGAATTTTGGT GAAAAAGATTGAAGATGATCAGTTTCTGGACCTTGTGACTGTGAATACTGATGTTCGATCTGTT TGCAAGGAAACTTACAGGTGAATTCATAAGTGACTTCTTCATTTTACCTTGTAACCTACCCTTT TCTTCAGCATCTGAAGTCTCTTTTTTTATCTGCAGCATCTACAAAGCTGCTCTCAAATCGAAAG GATCAATTAATGATTACAACCAGATTGCTCAGGTTTGTGTTATACTCTTGTCTCCAAGTTGTAT CAAAGGTTTTGAATACAAAACTTCCATCTGAAGCTTATATGATTGTTAACACGCTGCCTCTCCT AATTTCATTATTTTAGCAGTTACGGATTGTTGTAAAGCCAAAACCATCTGTAGGGGTCGGGCCT TTGTGCAGTCCACAACAGGTGAAATCCCAATGAAAAGGAAATGGGTATATTTTGTTCCGATTCG TTCTTGTGTGTCACTTAGCTTTCTCGCTCTGTCGTCAATGCAGATATGCTATCACGTTCTGGGG CTTGTTCATGAGATCTGGAAACCTATTCCACGAACAGTATGTATCAGATCTTTTGTTATTCAGG TTATATCTTATCTACATTGGGACTGAACATATGTCTTACAGGTAAAAGATTACATTGCAACCCC GAAGCCCAATGGATACCAGAGCCTCCATACTACTGTGATTCCATTCTTGTATGAGAGTATGTTT CGACTGGAGGTTCAGGTATTTGAGATAAAAATCTTTTATCACAGTTCTTAGAAAAACGCCGATG ATTAGTACAATTGAATTCGGTTTTAGTATTTTAAAGGTTCAAGCATGGGGAATATTTAAAAGGC TGATTTGATTGGTTATTAAGACTACATTTTTCTCTGCAGATCAGAACCGAGGAGATGGACTTGA TTGCTGAAAGGGGCATTGCTGTTTACTACAATGGCAAGTCTCTATCTACTGGATTAGTTGGAAA CGCGGTTCCTTTAGGTAGAAATTCAAGGGGGAAGACGGGTTGCCTCAACAATGCAGATTTTGCA CTCAGGGTATTTACTGACCATATTCAGAATTAAAAAAGCAGAGAGACGTGCTAGATGTAGGCGT AATGTGTTCCTTTTTACCTTCCCAGTGTGATTTTAGTTATGACAGTTTATTTTTCCAGGTTGGG TGGCTAAATGCAATAAGGGAATGGCAAGAGGAGTTTGTGGGTAACATGAGCTCTAGAGAATTTG TGGATACCATTACGAGGGATCTTTTAGGTAGTCGTGTGTTTGTATTCACACCTAAAGGAGAGGT AAGGACTACTATACCTCAAAGCCTCTTTAACCATCATCTAACATTTTTATGTTTTTGATTAAAT GCTTTGGTGTTCTATTTGCAGATAAAGAACCTCCCGAAAGGGGCCACCGTTGTTGACTACGCTT ATCTGATTCACACCGAAATCGGAAACAAGATGGTAGCAGCAAAGGTATTTTCCCTAGTTATGTC GTTCTTTCCATGATAACTTTGATTCTCGATTTGTTATCTTTGAAATAGAGACAACAATTGGACC AGACTTTAATGATACTTAATGGCTTGAAACTGCAGGTCAATGGTAATCTTGTTTCCCCAACTCA CGTTCTTGAGAATGCTGAGGTCGTGGAGATAGTCACCTACAACGTTTGTACCTTTTTCCCTTGC TTTTGTTTTAAATTTCTCCCTTTTCTTCTTGTCCTGCTTAGGAAAATTTTGATTGCCTTCATCA TGTTCCACGGGCTCTCATGTTTTATTATTATTGTCACATCACAGGCCCTCTCAAGTAAATCTGC TTTCCAAAGACATAAACAGTGGTTGCAACATGCCAAAACAAGGAGTGCAAGACACAAGATTATG AGGGTATGTTATTTTTAATTCTTTACTTCATGCTAATTGGCTCACTATTTACTAATTCATGTCT CTCATCTTGTTCCAGTTCCTAAGGGAGCAAGCTGCACAATGTGCTGCCGAAATTACCCAGGATC AAGTGAATGACTTTGTGGCGGACTCTGATAGTGATGTGGAAGATCTCACAGAAGATTCAAGAAA GAGCCTACAATGGTGGGAGAAAATCCTCGTCAATGTTAAGCAATTCCAGTCACAAGACAAAAGT AGAGATACAACACCCGCTCCTCAAAACGGAAGCGTTTGGGCCCCAAAGGTGAATGGAAAACACA ACAAAGCCATAAAGAACTCGAGTTCTGATGAGCCAGAGTTCCTCCTACCTGGAGATGGAATTGC CAGGATTTTACCTGCTAATATCCCTGCTTATAAGGAAGTGTTGCCCGGCTTAGACAGTTGGCGA GACAGTAAAATTGCCACATGGCATCATCTCGAAGGTCAGTCCATCGAATGGTTATGTGTAGTAT CCATGGATCGCAAAGGTATGGGTATATTCGTTTTGTTTAGTCATGATTGATGATTCCAACAACT TACAAAGTAAATATGAACTCTTTGTTACATTTGGCAGGCATAATCGCAGAGGTTACAACAGTCC TCGCAGCTGAAGGCATTGCATTATGTTCTTGCGTGGTTCGTGGTTTTACTTTAAACCTTGCTTC TAAAAACATTTTATAGTTCCTAACTACTCATCTTACAAAACTTATGGTTTATTGCAGGCCGAGA TTGACAGAGGAAGAGGATTAGCAGTAATGTTATTTCAAATAGAAGCAAACATTGAAAGTTTG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.165663319

Conservation Information
Conserved circRNAs	NA
PMCS	0.165663319

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							987462-990962(+)
						
					

						Potential amino acid sequence
						
							MFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENL
SFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSI
YKAALKSKGSINDYNQIAQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYI
ATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLG
RNSRGKTGCLNNADFALRVGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIK
NLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQ
WLQHAKTRSARHKIMRFLREQAAQCAAEITQDQVNDFVADSDSDVEDLTEDSRKSLQWWEKILV
NVKQFQSQDKSRDTTPAPQNGSVWAPKVNGKHNKAIKNSSSDEPEFLLPGDGIARILPANIPAY
KEVLPGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAAEGIALCSCVAEIDRG
RGLAVMLFQIEANIESLVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLH
NMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLY
KEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLR
IVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYE
SMFRLEVQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGW
LNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGN
KMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRFLREQ
AAQCAAEITQDQVNDFVADSDSDVEDLTEDSRKSLQWWEKILVNVKQFQSQDKSRDTTPAPQNG
SVWAPKVNGKHNKAIKNSSSDEPEFLLPGDGIARILPANIPAYKEVLPGLDSWRDSKIATWHHL
EGQSIEWLCVVSMDRKGIIAEVTTVLAAEGIALCSCVAEIDRGRGLAVMLFQIEANIESLVSKL
GKLKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETL
QVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDD
QFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLRIVVKPKPSVGVGPLCSPQQIC
YHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERG
IAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNAIREWQEEFVGNMSSREFV
DTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENA
EVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRFLREQAAQCAAEITQDQVNDFVADSD
SDVEDLTEDSRKSLQWWEKILVNVKQFQSQDKSRDTTPAPQNGSVWAPKVNGKHNKAIKNSSSD
EPEFLLPGDGIARILPANIPAYKEVLPGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAE
VTTVLAAEGIALCSCVAEIDRGRGLAVMLFQIEANIESLVSKLGKLKCKTESETIQDVKADDLR
QMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELEN
LSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYS
IYKAALKSKGSINDYNQIAQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDY
IATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPL
GRNSRGKTGCLNNADFALRVGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEI
KNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHK
QWLQHAKTRSARHKIMRFLREQAAQCAAEITQDQVNDFVADSDSDVEDLTEDSRKSLQWWEKIL
VNVKQFQSQDKSRDTTPAPQNGSVWAPKVNGKHNKAIKNSSSDEPEFLLPGDGIARILPANIPA
YKEVLPGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAAEGIALCSCVAEIDR
GRGLAVMLFQIEANIESL(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	987462-990962(+)
Potential amino acid sequence	MFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENL SFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSI YKAALKSKGSINDYNQIAQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYI ATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLG RNSRGKTGCLNNADFALRVGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIK NLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQ WLQHAKTRSARHKIMRFLREQAAQCAAEITQDQVNDFVADSDSDVEDLTEDSRKSLQWWEKILV NVKQFQSQDKSRDTTPAPQNGSVWAPKVNGKHNKAIKNSSSDEPEFLLPGDGIARILPANIPAY KEVLPGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAAEGIALCSCVAEIDRG RGLAVMLFQIEANIESLVSKLGKLKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLH NMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLY KEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLR IVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYE SMFRLEVQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGW LNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGN KMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRFLREQ AAQCAAEITQDQVNDFVADSDSDVEDLTEDSRKSLQWWEKILVNVKQFQSQDKSRDTTPAPQNG SVWAPKVNGKHNKAIKNSSSDEPEFLLPGDGIARILPANIPAYKEVLPGLDSWRDSKIATWHHL EGQSIEWLCVVSMDRKGIIAEVTTVLAAEGIALCSCVAEIDRGRGLAVMLFQIEANIESLVSKL GKLKCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETL QVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDD QFLDLVTVNTDVRSVCKETYSIYKAALKSKGSINDYNQIAQLRIVVKPKPSVGVGPLCSPQQIC YHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERG IAVYYNGKSLSTGLVGNAVPLGRNSRGKTGCLNNADFALRVGWLNAIREWQEEFVGNMSSREFV DTITRDLLGSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENA EVVEIVTYNALSSKSAFQRHKQWLQHAKTRSARHKIMRFLREQAAQCAAEITQDQVNDFVADSD SDVEDLTEDSRKSLQWWEKILVNVKQFQSQDKSRDTTPAPQNGSVWAPKVNGKHNKAIKNSSSD EPEFLLPGDGIARILPANIPAYKEVLPGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAE VTTVLAAEGIALCSCVAEIDRGRGLAVMLFQIEANIESLVSKLGKLKCKTESETIQDVKADDLR QMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSELEN LSFMYVSAEDYDRVTSRIANLYKEHEKELTEANRILVKKIEDDQFLDLVTVNTDVRSVCKETYS IYKAALKSKGSINDYNQIAQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDY IATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYYNGKSLSTGLVGNAVPL GRNSRGKTGCLNNADFALRVGWLNAIREWQEEFVGNMSSREFVDTITRDLLGSRVFVFTPKGEI KNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENAEVVEIVTYNALSSKSAFQRHK QWLQHAKTRSARHKIMRFLREQAAQCAAEITQDQVNDFVADSDSDVEDLTEDSRKSLQWWEKIL VNVKQFQSQDKSRDTTPAPQNGSVWAPKVNGKHNKAIKNSSSDEPEFLLPGDGIARILPANIPA YKEVLPGLDSWRDSKIATWHHLEGQSIEWLCVVSMDRKGIIAEVTTVLAAEGIALCSCVAEIDR GRGLAVMLFQIEANIESL(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT4G02260_circ_g.4

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