Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d031891_circ_g.2 |
ID in PlantcircBase | zma_circ_003587 |
Alias | tassel_test_circ_001316 |
Organism | Zea mays |
Position | chr1: 205438953-205439198 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d031891 |
Parent gene annotation |
Peptidase M1 family protein |
Parent gene strand | + |
Alternative splicing | Zm00001d031891_circ_g.3 |
Support reads | NA |
Tissues | tassel |
Exon boundary | No-No |
Splicing signals | GT-AA |
Number of exons covered | Zm00001d031891_T003:2 Zm00001d031891_T021:2 Zm00001d031891_T022:2 Zm00001d031891_T001:2 Zm00001d031891_T006:2 Zm00001d031891_T014:2 Zm00001d031891_T002:2 Zm00001d031891_T015:2 Zm00001d031891_T012:2 Zm00001d031891_T019:2 Zm00001d031891_T016:2 Zm00001d031891_T020:2 Zm00001d031891_T017:2 Zm00001d031891_T005:2 Zm00001d031891_T010:2 Zm00001d031891_T013:2 Zm00001d031891_T004:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.416346917 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |