Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G11350_circ_g.1 |
ID in PlantcircBase | ath_circ_002093 |
Alias | At_ciR1336 |
Organism | Arabidpsis thaliana |
Position | chr1: 3818363-3818600 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder, find_circ, CIRI-full |
Parent gene | AT1G11350 |
Parent gene annotation |
G-type lectin S-receptor-like serine/threonine-protein kinase SD 1-13 |
Parent gene strand | - |
Alternative splicing | AT1G11350_circ_g.2 AT1G11350_circ_g.3 |
Support reads | 3/2 |
Tissues | leaf/aerial |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G11350.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.400531353 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015;Chu et al., 2017 |