CircRNA Name |
AT1G14560_circ_g.1 |
ID in PlantcircBase |
ath_circ_002531 |
Alias |
At_ciR2157, Ath_circ_FC0344, AT1G14560_C1 |
Organism |
Arabidpsis thaliana |
Position |
chr1: 4981615-4982237 JBrowse» |
Reference genome |
TAIR10.38 |
Type |
ue-circRNA
|
Identification method |
CIRCexplorer, PcircRNA_finder, find_circ, CIRI2 |
Parent gene |
AT1G14560 |
Parent gene annotation |
Mitochondrial carrier protein CoAc1 |
Parent gene strand |
+ |
Alternative splicing |
NA |
Support reads |
4/2/3 |
Tissues |
leaf/root, whole_plant/seedlings |
Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
Number of exons covered |
AT1G14560.3:3 AT1G14560.1:3 AT1G14560.2:3
|