Splice junction sequence |
GCTTCACTCCTTTTGGTGGTGGGCAGAGGCTGTGCCCAGGCCTGGATCTGGCCAGGCTGGAAGC TTCCATCTTCCTTCACCACTTGGTCACCAGCTTCAGgtggtgttcgaaatcctggtgaggggcc tgatcgggctggaggcaggggaggagatgcagcagctgaagcagcaattccaggaatttattgt cggcctca
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 797 Transcript exons: 5237786-5237935,5238255-5238503,5239581-5239670,5239781- 5239966,5240477-5240598 GTGGTGTTCGAAATCCTGGTGAGGGGCCTGATCGGGCTGGAGGCAGGGGAGGAGATGCAGCAGC TGAAGCAGCAATTCCAGGAATTTATTGTCGGCCTCATGTCCCTCCCCATTAAGCTGCCTGGCAC TAGGCTCTACAGATCACTCCAGGCCAAGAAGAAGATGGCGAGGCTGATACAGAGGATCATCCGG GAGAAGAGGGCAAGGAGGGCCGCCGCCTCGCCGCCGCGGGACGCCATCGACGTGCTCATCGGAG ACGGCAGCGATGAGCTCACCGACGAGCTCATCTCCGACAACATGATCGACCTCATGATCCCCGC CGAGGACTCCGTCCCGGTGCTCATCACGCTCGCCGTCAAGTTCCTCAGCGAGTGCCCTCTCGCC CTGCACCAACTGGAAGAGGAGAACATACAGCTCAAGAGGCGAAAAACCGACATGGGTGAGACCT TGCAATGGACAGACTACATGTCATTGTCATTCACACAACATGTGATAACAGAGACGCTGCGGTT GGGCAACATCATCGGTGGGATCATGCGCAAGGCGGTGCGCGACGTCGAGGTGAAGGGGCACCTC ATCCCCAAGGGGTGGTGCGTGTTTGTGTACTTCCGGTCAGTCCACCTCGATGATACGCTCTACG ATGAGCCCTACAAGTTCAACCCATGGAGGTGGAAGGAGAAGGACATGAGCAATGGCAGCTTCAC TCCTTTTGGTGGTGGGCAGAGGCTGTGCCCAGGCCTGGATCTGGCCAGGCTGGAAGCTTCCATC TTCCTTCACCACTTGGTCACCAGCTTCAG
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Genomic sequence |
GTGGTGTTCGAAATCCTGGTGAGGGGCCTGATCGGGCTGGAGGCAGGGGAGGAGATGCAGCAGC TGAAGCAGCAATTCCAGGAATTTATTGTCGGCCTCATGTCCCTCCCCATTAAGCTGCCTGGCAC TAGGCTCTACAGATCACTCCAGGTACTCTCTCTCTCTCTCTCTCCCTCTCATCTAAGTTCTCTT TCTCTCTCTACCTGTAGTACTCCATGTAAACCTGCACTGCACCACACATTGATCTCTACTACTC TCTTCTGTCAGCCACTCTGTCTCTCCTTTATGTCTGATGTTGCTCAGCCCTACTCCATGCAGCA TCAGCAGCAGCATGATCAGTGTCTCAGCTGCCATCACCATTAACCTCTCTTAATATGTTCTCTC TGTTTCACAATCTTGGATTAAATGTATACAATTGCACTCGATCCATTGCACATTTTTGACACAT TATTGTGTGTGTGGTCATCAGGCCAAGAAGAAGATGGCGAGGCTGATACAGAGGATCATCCGGG AGAAGAGGGCAAGGAGGGCCGCCGCCTCGCCGCCGCGGGACGCCATCGACGTGCTCATCGGAGA CGGCAGCGATGAGCTCACCGACGAGCTCATCTCCGACAACATGATCGACCTCATGATCCCCGCC GAGGACTCCGTCCCGGTGCTCATCACGCTCGCCGTCAAGTTCCTCAGCGAGTGCCCTCTCGCCC TGCACCAACTGGAAGTAAGCCTGTATACCTGAAACCTCTCTTACAACACAGTAAGCTCTTAATT GGATCAATACCTGCATATAATTAGATGCTAGAGATGAATCCTGAACAGAAAAGAAAAATAAAAC CATACCCTAGGAAGTAATTAAGGATCCTCTGTTGCTGGGCATGGGCAGTCAGCAAAAAGGGTCC AGAACTGAAAAGAGTTGGATTTTCTTTCTTTTTTGTCTGAAAGGAACATGATCAACTATTCATT TTGTCAGAGCCATGTGTTGTGCATGATATACTACTATCACTATTGTCTACTACACACAATGGCA GAGGATCTGTGTCCCCAAACAAAAACTAGATCATAAAAAGCCTACGAATAAGGGAGAGATACGT AGGTGGGCAGAAGGGATCAGCAGCATATAAAGGGTTGTGCCAACCTTGGTCCATCCCTTTCTTG TTGGCATCTTAGAGCTATCATTATTATTTGTTATCTAATGTGCCATCTGAAAAGAAATACTACT ACTACTTGTGTTTGGACCAATCTTTGCAAGATGACGTGCGTTGCATCATTGTCAATGTCAGGTC GGGTACATACATATCATTAGAACAGAGTCGCCTTCTCACAAAAGAAAAGGCTTACTATCATGAT GTATCATCTACTTACATATCATTAGTTTGTGCTATTATGCGTTTTTTTTTTCTAACCGGCTATA AACGCATGTGCAAGGAATAGTTTTTTTGGTTGAAGTATGGAGGGTTTTTTATCAACTGGGGAAA AAAGAAGGTTACATAATTTGGCTATTTATTCTATGGAGATTAGAAGGCAGCAGTAATATTTCCT AGCTAGCATGTCCTATTACACCAGTAGCATTGTGTCATATGCTAGATTCCATTTACATCACTAC AGTGCTAAGAAATTACTCGCGTGTCGACTGTGTTTCTGTTTTGATGCCATGTGAGCAATAAACT CATTGAAACCTCTGCATGTCTACCACTGTTAGAGAACATGCATATCGCGGCTGAAGATAAAATC CACCGTCAGTAATTACTTGTTGTAACAATGATGAATAATAACACCAATCACATTCTAATGCTAC CAGGAGGAGAACATACAGCTCAAGAGGCGAAAAACCGACATGGGTGAGACCTTGCAATGGACAG ACTACATGTCATTGTCATTCACACAACATGTAAGTATAGTTCATTAACACTGTAACATAAATTT CTATAGCTCAAAATCTACTGGCCCCGTGTGGTTTTTTTCCCATGACCCCATGCGATTTGGAAAA TTGGAGTGTAGGTGATAACAGAGACGCTGCGGTTGGGCAACATCATCGGTGGGATCATGCGCAA GGCGGTGCGCGACGTCGAGGTGAAGGGGCACCTCATCCCCAAGGGGTGGTGCGTGTTTGTGTAC TTCCGGTCAGTCCACCTCGATGATACGCTCTACGATGAGCCCTACAAGTTCAACCCATGGAGGT GGAAGGTAAGAAAGAGCCCCACATTTGGTAGAGATGTTCATCCAATTGCTACCCCTTTAGGCAA CACCAGCATAATAAGGATTTGATGAGTGCGGTTTTGGTGGGACTCCTAACATGTGGGCTTACTT CTATATCAGTAATCTCATGATGGATTTGACATTGCCTTGTACTAACACTTAGTATTGCAGAAAA TAACAGAGATTCCCTCAAAGTTGCATTAGTGATTGATATATACACCTAGGCAGAAGTCAATTGA ATCTCCCAAAATAACTGGATTTGGTAGTTCTTTGAACTGGTAAATTCAGACAACATAAGCTTAA GCTGTCCAGGAAAGGAATACACACCCTTTTTTTCCCTCTATTGTGTACTTTGTGTAAGCTCTGA AAATGATATGCAAATAATTAATCTAGGCAAATGATGGTGCTGTACTACTGTTGAGGCATCCTAT CATTATGATTTGATTTGGGAAGTCTAATAATGTGCTAATTGGTCAAGAAATCAATCAATCTCAA CAGGAGAAGGACATGAGCAATGGCAGCTTCACTCCTTTTGGTGGTGGGCAGAGGCTGTGCCCAG GCCTGGATCTGGCCAGGCTGGAAGCTTCCATCTTCCTTCACCACTTGGTCACCAGCTTCAG |