Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d003601_circ_g.3 |
ID in PlantcircBase | zma_circ_001047 |
Alias | circ437 |
Organism | Zea mays |
Position | chr2: 49479478-49480045 JBrowse» |
Reference genome | AGPv4.38 |
Type | ei-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d003601 |
Parent gene annotation |
Auxin response factor 6 |
Parent gene strand | - |
Alternative splicing | Zm00001d003601_circ_g.2 |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Zm00001d003601_T001:3 Zm00001d003601_T006:3 Zm00001d003601_T003:3 Zm00001d003601_T004:3 Zm00001d003601_T007:3 Zm00001d003601_T002:3 |
Conservation Information | |
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Conserved circRNAs | osa_circ_023936 |
PMCS | 0.02274061 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |